NO16G00220, NO16G00220 (gene) Nannochloropsis oceanica

Overview
NameNO16G00220
Unique NameNO16G00220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4305
Alignment locationchr16:85800..90104 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr16genomechr16:85800..90104 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO16G00220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoR031ngnoR031Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO16G00220.1NO16G00220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO16G00220.1NO16G00220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO16G00220 ID=NO16G00220|Name=NO16G00220|organism=Nannochloropsis oceanica|type=gene|length=4305bp
GACCCATAGTCATCACTTGTGCGATCAAATAATCTGACATCTTTTTATTT
GTACTTTAACATACCGTGTCCCTATATGCATGCATTCAGCGTTTTGACCC
GTTGGGGCTTGCCTTCTTCATCTTTTTGCTCTCTCTTTTTTTCTCCTGCT
TTCTCTTCCTCTCTTTTTCATGCTCCTCCTCCTTCTCCTTCTCCTCCTCC
TCCATTGGGGTCGCTCCACCCTCATCCCGATGGCGCTGCTGTTGCAGCTG
CTGCTCCTCTTGTGATTGCTGCTGCTGTATCAATCGGCGCCGTCGCAAGT
GCACAGGCTCCTTCGAGTCACTTTCGCCTCCATCCTTTTCTGTTACGAAC
GAATCCCGGTAGACCCGCAACGCCTCCTCCTCCTCCCTCCCTCCCTCTCT
CTCTCCCTCCCACAGCCCTTCCAACCCCTCCTCCAACATGGCAATGATCC
CCTTCACATCTTCCTCCGAGCCATGAAACGAAGCATCTTGCCGCAGGGCG
TCCAGCTCGTCCGCAAAGGCCTCCATCGCGTACGCCAGGTAGCCCTCCCT
CAAACCTGCTCTCAGTCCCTCCCTCTCCGCCTTGGACGCCACCTCAGCGT
CCTTGGCTTGCAGTGTGAGCTGAGAGGTATGTGAGGCCCAGAAACTGTCG
ATGTCTTTCTGGCAGTCACGTATTTGGGCCAGGAGAGAGGCAGGAGATGA
GGTGGTGGAGGCAGGGCGGCAAGAGGCAGGGAGGAGTAAGGCGTTGGTTA
ATCTCCACAGCTTTTGTTGCAAGGCCAACAATTGCTCCTCGGGAGGGGGT
AGGGGGCTTATGCTGCCGTCCGCGACGTCGCTGATGAGAGCTGTCATATG
GGTTTGGCTGTAATCGGGTTGAGCGGGATGGAAGGCGAGGGGATGACGGG
GGGGTGGGGAGGTCAAAAGGAGGATTTTATGGATTTCAGAGCATCTGAAG
CAATCGAAGGGCTCCCTTCATAAATATCCCTACACGATACACAGGAACAA
CATGCAGAGCGCGATGCCATAGAGGAGGCGGCGTGGTGATCTTAGTGGCA
GCGGCGGTCGTTTCTTGCCTGCTCCTTCGCTTTTTGACGTGGCCTATGAT
TTCTCGTGTTCTGCAGCCGTCTCTACTCGCTTCGCTCCACCGCACATGAA
ATACCCCCCGTCGCACTACATCTTTCACCCTCTTCCTCCACTACAAACAT
AGCGTATATATCTTGCCAGCTGTGGCAGCATGTCGACGCCTCCAACCTCC
AATGCGGCCTCCTCCTCCTCATCCCCCCAACTCTCCCTCGTCGACTACTC
CCCCAAATGCCTTCTTCTCCGAGGCAAAACCTTGCCGTACAGAACCACCT
TACGCGACATGGGAGGGAAATGGAACGGGTCTTTGAAAGGTTGGGTGTTT
AGCAAGAAGACACGCGCAAAAGCTTTGTCGGCGTGGCTTGCCAAGGTCCA
AGCTGCTGCTGCTGCTGCTGCTTCCGCCGCTTCTGCTTCTGCTGGTGATG
CTGCTACTTCTTCTCCTGCCGCTGTAGCAGGCCGGAAAAAGGCGAAGAAA
ATGAAACCAGGGGGCTATGGCAAACGAGATGAAGGGGGAGGTGAGGTGGA
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGACAGAGGAAACGGC
ACATGCGGCTTAGTCGAACGAGAAAGGAGGAGGATGGTAAGCAGGAGGTA
CTAAAGCATGAGGGAGTCGGACCTTTGCAAGCTACGCGGCTAAGGAGGGG
CAGGAAACGTGTCGATTACGAGGAATTCGGGGAGGACGGGGAGGAGAGAG
TTGCTGAGGATAGGGAAGGGATGGTGGCAAAGAAGAACGTGAACTCGAAG
AAGACGACCATGAACGTGAGGAAGAAAGTGCCGTCGCGGCGTGTGACTAG
GGAGGAGATGGGAAGGGGCAAGAAAAGAGGGAGGAGGGAGGAGGAGGAGG
AAGAAGGTGGGGGGTACGAAGGGTCGTCGGACGACAGCGATAGCGACAGC
GACGACAGTAGCGGGTCATGGAGTGAGGGCGACGAGGACGAGGATGAGAA
CGAGGACGAGGACGAGGACGATGAAGAGGAGGAGGCGTATGAGGGGGAGA
GCGACAATGAGGAGGAGGACGAAGAAGGGTGGGATGAGGAGAAAGTTTAC
AGTGTCTTCACGACTACGGCACGACAGCGCGCGGCCGCAGTTGCTGCTGC
TCAAAGTGGAGGGGGGGGAGGCAATGGTGGAAATGGCGGTGCCAGCGAAG
GCAAAGGCCTTGTCCCCTCGTCGTCCCTCGCTACCCGGAGGTTGAAAACG
ACGGCCTCTGGCAAGAGCAAAAGGGAGGGGAAGGACAAGGGAAAAGCGAA
TACGTTCAAGATGAGGGCGATGGCAGCACCAGGAGGCGGGCCAGCGAGGA
CACGAAGGCGAAAAGGGGTGGTAGAGGAGGAGGAAGACTTTCCAGAGCTC
CTTCCCTCCTCCTCCCCCTCCTCTTCCCTCCGCCTCCGCTGTCGAGGCCG
CAACCGCCCCACCAGTTCCTCCTCCGTTTCCTCCCCCTCCTCCTCGCCCC
ATCCCTCCTCATCCCTCCCCTCCCTCCTCCTCCTCCTCCCCCAACACCTC
CTCCTCTCCTCCATCCTCCCCTTCTTGGCCCCGCAGCCCGACTTCCTCAA
TCTTGCTCAGGCCTGCTCCCCCCTCCTCCTCTTTTTCGATCAGCCATGTG
TTTGGTCCTCCCTCCCTCCCTCCCTCCCTCCCTTCGACCTCCGGTACTCG
TCCCTTTCCCAGGGTCGGACTGCCCGCGGACGGCTCACCAAGCAGCCTAT
GGACATCTGTATGTTGAAGCTTATGgtgcgtctttccgcccctccttccc
tcttgtccctccctcatttctttctttcaaaaggcaaccatggcagaaca
tcttcaccttcttattcctttacccccctccctccactcccttcccccac
ccccccccctatatcctccctgatccccccttctccccaccttgtagAAG
ATTCTAAACCAAAGCCGTTTCAGCCTTCTCCCCTCTCTGGACCTTCGCGG
CATGGCCTTGGGCGCTGCTCGCTCCAAAGGAGGAGGGGGGAAGGAGGGAG
GGAAGGGGGGAGGGTGCCCGCTGTTGAATTATATGCTGGAGAAGTGTGGG
GAAGTGGAGAGGCTATGGCTGCAGGGGCCGGGGGACAGCTCGTCGGGATG
GGCGGATGGGGAGGTGGAGAAGAGCCTGGAGGCGGTGAAGGAGCAGgtga
gggagggagggaggacgggaagggctgaggggtttgtggtgcgttgagac
ccctccgaaactacacgtcttttaaagaacaatgactccaactcccctcc
ttctctctccctccctccttccctctgactagCTGACGGACCTGGCCGTG
GAGGTGAATAACATCAACGCTTTGAAGCAGCTGCTGGCGGGTTGCCCCCG
TCTGGAACGCTTGGCCTTGGGAGGGTATAACTCTCGGGATCTCACGGTCC
AGGAGTGGAGGAGGCTGTGGGCGTTTGAAGGAGAGgtaaaaagataggga
gggagggaagagaagggagggagggaagggagggaaggtatatttttacg
aggctttttttaatatctcctcctcctctttcgcccccccccctccgccc
tcgactcacccttccgtcctcctctttcatttctccttctcatcctcatg
cattttttcaccccccacagACACCGCCCCCATCCTCCCTGAAACACTTG
GTCGTCCTCGACGGCCAGCACGGGGCGCTCGACAGCGTCAAGTACGCATG
CCGTCGTTTCCCTTCGCTGGAGACATGCACGATTCGATTTTCAGAAGGAT
CGCGCCAGCATAAGGAGTATGGAGACCTGATTTTGTACGATGAAACGGTA
TATGAGCCGGTGAGATTGGAGACGGGAGGGGAAGGGGGGGGGGTAGAAGG
GTAGGGGGGGAGGAACACAAGCATGTGATGGGACAAGCAAAGGATGCGAG
GAAGAATCGGGATATTGGGGCACAGGCGGGGGCACGTATGTGGTAAAGTC
TACATCTGAGTACGTGATTGGGAAGGAAGAGGAGGAGTTGAAGGTGGAGC
TTATTTTAGCGATGATCATGTCGAACGACGATGGAAACATCCTCAGGGAG
TTAAAATCGAGAGACGTGGTGTGATGGATCTGGTCGTTACGGGAGTTAAA
AGGACACAGTATTTTAAGACTAAGAATTGAAATTCTTCATGTGGGAAATC
GGAGGAAGGCTCTTAGGTCAAATGAAATGTACAAAGAAGACGGCGACTTG
TGATG
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protein sequence of NO16G00220.1

>NO16G00220.1-protein ID=NO16G00220.1-protein|Name=NO16G00220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=744bp
MSTPPTSNAASSSSSPQLSLVDYSPKCLLLRGKTLPYRTTLRDMGGKWNG
SLKGWVFSKKTRAKALSAWLAKVQAAAAAAASAASASAGDAATSSPAAVA
GRKKAKKMKPGGYGKRDEGGGEVEGGGGGGGGGGGGQRKRHMRLSRTRKE
EDGKQEVLKHEGVGPLQATRLRRGRKRVDYEEFGEDGEERVAEDREGMVA
KKNVNSKKTTMNVRKKVPSRRVTREEMGRGKKRGRREEEEEEGGGYEGSS
DDSDSDSDDSSGSWSEGDEDEDENEDEDEDDEEEEAYEGESDNEEEDEEG
WDEEKVYSVFTTTARQRAAAVAAAQSGGGGGNGGNGGASEGKGLVPSSSL
ATRRLKTTASGKSKREGKDKGKANTFKMRAMAAPGGGPARTRRRKGVVEE
EEDFPELLPSSSPSSSLRLRCRGRNRPTSSSSVSSPSSSPHPSSSLPSLL
LLLPQHLLLSSILPFLAPQPDFLNLAQACSPLLLFFDQPCVWSSLPPSLP
PFDLRYSSLSQGRTARGRLTKQPMDICMLKLMKILNQSRFSLLPSLDLRG
MALGAARSKGGGGKEGGKGGGCPLLNYMLEKCGEVERLWLQGPGDSSSGW
ADGEVEKSLEAVKEQLTDLAVEVNNINALKQLLAGCPRLERLALGGYNSR
DLTVQEWRRLWAFEGETPPPSSLKHLVVLDGQHGALDSVKYACRRFPSLE
TCTIRFSEGSRQHKEYGDLILYDETVYEPVRLETGGEGGGVEG*
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Synonyms
Publications