NO16G00120, NO16G00120 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00120 vs. NCBI_GenBank
Match: EWM22819.1 (Poliketide cyclase/dehydrase [Nannochloropsis gaditana]) HSP 1 Score: 206.8 bits (525), Expect = 1.100e-49 Identity = 124/210 (59.05%), Postives = 148/210 (70.48%), Query Frame = 0
Query: 9 CIVTIGPAPPAHPPSMRLITASLLVKRPRAAVFRVLTAYDRLSDYLPNCTHSQVLPLPPGSQATVRITQTAVETMSFWKXXXXXXXXXXXXXXXXXXXXXXXXXXLSSLSSYNPLSMLTQASVLLDVYEDPISYTITSYLVENSSAFLRTYEGRWRLFAEENEEEGAQSGTLMCYEALVRPKELIPIMAVEWKMKRDLAANLSALKRVAE 219
C + I AP H S RLITASLLV RPRA+VFR+LTAYDRL+ YLPNC+HSQ +PLPPG+ A+VRITQTAVET F + XXXXXXXX L+S+ + L QA+V+LDVYED +YTI+S+LVEN+ AFL+ YEG+WRL EE G Q T MCYEA RP+ L+P+MAVEWKMKRD+A NL ALKR AE
Sbjct: 46 CDIKIQRAPAPHRASTRLITASLLVLRPRASVFRLLTAYDRLARYLPNCSHSQCIPLPPGATASVRITQTAVETFPFCE----------VKAKPTSAXXXXXXXXXXXLTSF--VQPLLQATVILDVYEDQENYTISSFLVENTPAFLKLYEGKWRLL---EEEVGGQQVTRMCYEATFRPRVLVPLMAVEWKMKRDVAVNLHALKRAAE 240
BLAST of NO16G00120 vs. NCBI_GenBank
Match: EWM26918.1 (START-like domain protein [Nannochloropsis gaditana]) HSP 1 Score: 67.8 bits (164), Expect = 8.000e-8 Identity = 58/231 (25.11%), Postives = 106/231 (45.89%), Query Frame = 0
Query: 2 HDDEHQACIVTIGPAPPAHPPSMRLITASLLVKRPRAAVFRVLTAYDRLSDYLPNCTHSQVLPLPPGSQA-----TVRITQTAVETMSFWKXXXXXXXXXXXXXXXXXXXXXXXXXXLSSLSSYNPLSMLT-QASVLLDVYEDPISYTITSYLVENSSAFLRTYEGRWRL-------FAEENEEEGAQSGTLMCYEALVRPKELIPIMAVEWKMKRDLAANLSALKRVAEE 220
++DE + + P+ ++R I++S++V RP + V+++LT Y+ LS+Y+PN T S+++ PPG +A VR+ Q +T + +N + LT + + ++ + + + +S+ F + G WRL A ENEE T + Y V+PK +P+ A+EW++K D+ NL A+K +E+
Sbjct: 206 NEDEEEVLVNIESPS-----ANVRRISSSIVVNRPLSDVWKILTDYNNLSEYVPNLTQSRLVATPPGWEARGKNKEVRLFQEGAQT----------------------------------IVGFNFKASLTMDMEEVFEAEDEKLGQRRIKFRLVDSAMF-SDFSGEWRLQCYSRMRTACENEE--WTYSTKLFYMVNVKPKGPVPVGALEWRIKEDVPTNLRAVKVASEK 394
BLAST of NO16G00120 vs. NCBI_GenBank
Match: WP_015156436.1 (MULTISPECIES: cyclase/dehydrase [Cyanobacteria] >AFY89896.1 cyclase/dehydrase [Chroococcidiopsis thermalis PCC 7203] >PSB43284.1 cyclase [Cyanosarcina cf. burmensis CCALA 770] >PSB62187.1 cyclase [Chroococcidiopsis cubana CCALA 043]) HSP 1 Score: 65.5 bits (158), Expect = 4.000e-7 Identity = 57/198 (28.79%), Postives = 86/198 (43.43%), Query Frame = 0
Query: 25 RLITASLLVKRPRAAVFRVLTAYDRLSDYLPNCTHSQVLPLPPGSQATVRITQTAVETMSFWKXXXXXXXXXXXXXXXXXXXXXXXXXXLSSLSSYNPLSMLTQASVLLDVYEDPISYTITSYLVENSSAFLRTYEGRWRL---FAEENEEEGAQSGTLMCYEALVRPKELIPIMAVEWKMKRDLAANLSALKRVAEE 220
R ITA + + P V++VLTAYD L+D++PN S+ L P G +R+ Q + + L A V+LD+ E+ + I +VE L+ Y G+W L F EN GT +CY V PK +P+ VE ++++DL +NL A++R EE
Sbjct: 43 RQITAKIQISHPVEKVWQVLTAYDTLADFIPNLAVSRRLAHPHGG---IRLEQVGTQRL---------------------------------------LRFNFSARVVLDL-EEKFPHEIHFDMVEGD---LKAYSGKWLLEPYFVCEN------PGTNLCYTVRVLPKRTMPVAIVERRLRQDLRSNLLAIRRRVEE 188
BLAST of NO16G00120 vs. NCBI_GenBank
Match: GAX25868.1 (hypothetical protein FisN_6Hh094 [Fistulifera solaris]) HSP 1 Score: 65.1 bits (157), Expect = 5.200e-7 Identity = 56/199 (28.14%), Postives = 84/199 (42.21%), Query Frame = 0
Query: 22 PSMRLITASLLVKRPRAAVFRVLTAYDRLSDYLPNCTHSQVLPLPPGSQATVRITQTAVETMSFWKXXXXXXXXXXXXXXXXXXXXXXXXXXLSSLSSYNPLSMLTQASVLLDVYEDPISYT---ITSYLVENSSAFLRTYEGRWRLFAEENEEEGAQSGTLMCYEALVRPKELIPIMAVEWKMKRDLAANLSALKRVA 218
PS R I ++ P A V+ +LTAYD LS ++PN S++ PP Q + E + F K + + ASV + + E IS + IT V+ S F ++G W+ AEE T + Y VRPK +P+ A+EW+++ D+ NL A+KR A
Sbjct: 77 PSSRRIFGEIIAPVPLADVWSILTAYDDLSTHVPNLKESRITRRPPSGQP----GDGSFECILFQK------------------------------GAQKIVGFEFAASVTMKMKESYISASERKITFQCVD--SMFFNAFDGEWK--AEERVSADGMPETKLSYVVDVRPKGPVPVAALEWRIREDVPTNLRAVKRSA 237
BLAST of NO16G00120 vs. NCBI_GenBank
Match: WP_106547127.1 (cyclase [Chroococcidiopsis sp. CCALA 051] >PSM47150.1 cyclase [Chroococcidiopsis sp. CCALA 051]) HSP 1 Score: 65.1 bits (157), Expect = 5.200e-7 Identity = 57/198 (28.79%), Postives = 86/198 (43.43%), Query Frame = 0
Query: 25 RLITASLLVKRPRAAVFRVLTAYDRLSDYLPNCTHSQVLPLPPGSQATVRITQTAVETMSFWKXXXXXXXXXXXXXXXXXXXXXXXXXXLSSLSSYNPLSMLTQASVLLDVYEDPISYTITSYLVENSSAFLRTYEGRWRL---FAEENEEEGAQSGTLMCYEALVRPKELIPIMAVEWKMKRDLAANLSALKRVAEE 220
R ITA + + P V++VLTAYD L+D++PN S+ L P G +R+ Q + + L A V+LD+ E+ + I +VE L+ Y G+W L F EN GT +CY V PK +P+ VE ++++DL +NL A++R EE
Sbjct: 43 RQITAKIQISHPVEKVWQVLTAYDTLADFIPNLAVSRRLAHPYGG---IRLEQVGTQRL---------------------------------------LRFNFSARVVLDL-EEKFPHEIHFDMVEGD---LKAYSGKWLLEPYFVCEN------PGTNLCYTVRVLPKRTMPVAIVERRLRQDLRSNLLAIRRRVEE 188
BLAST of NO16G00120 vs. NCBI_GenBank
Match: OWY67634.1 (cyclase [cyanobacterium TDX16]) HSP 1 Score: 64.7 bits (156), Expect = 6.800e-7 Identity = 57/198 (28.79%), Postives = 86/198 (43.43%), Query Frame = 0
Query: 25 RLITASLLVKRPRAAVFRVLTAYDRLSDYLPNCTHSQVLPLPPGSQATVRITQTAVETMSFWKXXXXXXXXXXXXXXXXXXXXXXXXXXLSSLSSYNPLSMLTQASVLLDVYEDPISYTITSYLVENSSAFLRTYEGRWRL---FAEENEEEGAQSGTLMCYEALVRPKELIPIMAVEWKMKRDLAANLSALKRVAEE 220
R ITA + + P V++VLTAYD L+D++PN S+ L P G +R+ Q + + L A V+LD+ E+ + I +VE L+ Y G+W L F EN GT +CY V PK +P+ VE ++++DL +NL A++R EE
Sbjct: 43 RQITAKIQISHPVEKVWQVLTAYDTLADFIPNLAVSRRLAHPHGG---IRLEQVGTQRL---------------------------------------LRFNFSARVVLDL-EEKFPHEIHFDMVEGD---LKAYSGKWLLEPYFVCEN------PGTNLCYIVRVLPKRTMPVAIVERRLRQDLRSNLLAIRRRVEE 188
BLAST of NO16G00120 vs. NCBI_GenBank
Match: WP_015200696.1 (cyclase/dehydrase [Calothrix parietina] >AFZ04086.1 cyclase/dehydrase [Calothrix sp. PCC 6303]) HSP 1 Score: 64.3 bits (155), Expect = 8.800e-7 Identity = 52/190 (27.37%), Postives = 84/190 (44.21%), Query Frame = 0
Query: 25 RLITASLLVKRPRAAVFRVLTAYDRLSDYLPNCTHSQVLPLPPGSQATVRITQTAVETMSFWKXXXXXXXXXXXXXXXXXXXXXXXXXXLSSLSSYNPLSMLTQASVLLDVYEDPISYTITSYLVENSSAFLRTYEGRWRLFAEENEEEGAQSGTLMCYEALVRPKELIPIMAVEWKMKRDLAANLSALK 215
R ITA++ + RP AV++VLT Y+ L D++PN S+ L P G +R+ Q + S + M A V+LD+ E+ I +VE L+ + G W L N+ ++GT +CY+ LV PK +P+ +E ++ +DL NL A++
Sbjct: 55 RQITATVEIPRPPEAVWQVLTDYEALPDFIPNLAKSRRLDHPRGG---IRVEQ---------------------------------------IGSQRLMKMNFSARVVLDL-EESFPQEINFQMVEGD---LKAFSGTWLLTCCSND---GKAGTRLCYKILVHPKITMPVGMIERRLSQDLKVNLLAIR 195 The following BLAST results are available for this feature:
BLAST of NO16G00120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00120 ID=NO16G00120|Name=NO16G00120|organism=Nannochloropsis oceanica|type=gene|length=7417bpback to top protein sequence of NO16G00120.1 >NO16G00120.1-protein ID=NO16G00120.1-protein|Name=NO16G00120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=363bpback to top protein sequence of NO16G00120.2 >NO16G00120.2-protein ID=NO16G00120.2-protein|Name=NO16G00120.2|organism=Nannochloropsis oceanica|type=polypeptide|length=363bpback to top Synonyms
Publications
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