NO16G00020, NO16G00020 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO16G00020 vs. NCBI_GenBank
Match: XP_005854467.1 (kh domain protein [Nannochloropsis gaditana CCMP526] >EKU21891.1 kh domain protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 543.9 bits (1400), Expect = 8.100e-151 Identity = 266/379 (70.18%), Postives = 326/379 (86.02%), Query Frame = 0
Query: 179 KEERRQQLALLSREEEENGTEELYTVTILVPNEAMGLLIGRSGATRQEIVTRADNVRLKVQDYKDMGEGCFDRGITLNGPWEKVAKAEILILQKLIDRRESIKKEGNIEDTLFAGPDPRITIKWCIPRELGGALIGKRGSTLAHISSDSGARLRLGHEEELPPGNNHERVVYVTGKKAERDKALALIQEKVGGHHFGVLSHSYGPDAVIVKVPVRCVGTLMGSRGIKIKEIKEKTGARITFSKIGDTEMGSNESSVILDGSTRQVNAAREMLRERVFAWKMQQSKEKAEKALAEASXXXXXXXXXXXXXXXXXXXKFSIPVPLVGHVIGRGGAFIRELHSTGVMVKILQEERSFTRTYDERPVVMTGPLANVLAVQQQV 558
+EERR++ E++E+ YT+TILVPNEAMGLLIGR+GATRQEIV+RADNVRLKVQDYKDMGEGC+DRGITL+G WEKVAKA++LILQKLIDRR SI +EGN+EDTLFAGPDPR+T+KWCIP ELGGALIGKRG+TLAHISS+SGAR+RLGHEEELPP + +R VYVTG+KAERDKALALI+EKVGGH+FG+L + PDAV+VKVPVR VG LMG +G +++E++E TGAR+ +KIGDTEMGSNE+S++LDGS +++NAARE++RERVFAW+MQ+SKE+AE+AL EA+ KFS+PVPL+GHVIG+GG+FIRELH++GV+VKILQEE SFTRTYDERPV++TGPLA VLAV+QQ+
Sbjct: 215 REERRRRRFSGQGEQDESS----YTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKIGDTEMGSNETSIVLDGSQQEINAAREIVRERVFAWRMQESKERAERALTEAA--AEELGMQASAEEEEVTIKFSLPVPLMGHVIGKGGSFIRELHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQL 587
BLAST of NO16G00020 vs. NCBI_GenBank
Match: EWM22832.1 (rna-binding protein nova-2 [Nannochloropsis gaditana]) HSP 1 Score: 373.6 bits (958), Expect = 1.500e-99 Identity = 178/245 (72.65%), Postives = 215/245 (87.76%), Query Frame = 0
Query: 179 KEERRQQLALLSREEEENGTEELYTVTILVPNEAMGLLIGRSGATRQEIVTRADNVRLKVQDYKDMGEGCFDRGITLNGPWEKVAKAEILILQKLIDRRESIKKEGNIEDTLFAGPDPRITIKWCIPRELGGALIGKRGSTLAHISSDSGARLRLGHEEELPPGNNHERVVYVTGKKAERDKALALIQEKVGGHHFGVLSHSYGPDAVIVKVPVRCVGTLMGSRGIKIKEIKEKTGARITFSKIG 424
+EERR++ E++E+ YT+TILVPNEAMGLLIGR+GATRQEIV+RADNVRLKVQDYKDMGEGC+DRGITL+G WEKVAKA++LILQKLIDRR SI +EGN+EDTLFAGPDPR+T+KWCIP ELGGALIGKRG+TLAHISS+SGAR+RLGHEEELPP + +R VYVTG+KAERDKALALI+EKVGGH+FG+L + PDAV+VKVPVR VG LMG +G +++E++E TGAR+ +K+G
Sbjct: 90 REERRRRRFSGQGEQDESS----YTLTILVPNEAMGLLIGRAGATRQEIVSRADNVRLKVQDYKDMGEGCYDRGITLSGSWEKVAKAQVLILQKLIDRRNSIIREGNLEDTLFAGPDPRVTVKWCIPLELGGALIGKRGATLAHISSESGARIRLGHEEELPPSRHQKRAVYVTGRKAERDKALALIREKVGGHYFGLLGQGFSPDAVVVKVPVRAVGMLMGPKGARMRELRETTGARVMLAKVG 330
BLAST of NO16G00020 vs. NCBI_GenBank
Match: CBN74642.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 181.0 bits (458), Expect = 1.400e-41 Identity = 140/484 (28.93%), Postives = 231/484 (47.73%), Query Frame = 0
Query: 131 GEKGKEKEVLEKDKGSEGKSGHHVSSRW---------------SSAPSGRVGSPTKRQGPIGWKEERRQQLALLSREEEENGTEELYTVTILVPNEAMGLLIGRSGATRQEIVTRADNVRLKVQDYKDMGEGCFDRGITLNGPWEKVAKAEILILQKLIDRR----------------------ESIKKEGNIEDTLFAGPDPRITIKWCIPRELGGALIGKRGSTLAHISSDSGARLRLGHEEELPPGNNHERVVYVTGKKAERDKALALIQEKVGGHHFGVLSHSYGPDAVIVKVPVRCVGTLMGSRGIKIKEIKEKTGARITFSKIGDTEMGSNESSVILDGSTRQVNAAREMLRERVFAWKMQQS----KEKAEKALAEASXXXXXXXXXXXXXXXXXXXKFSIPVPLVGHVIGRGGAFIRELHS-TGVMVKILQEERSFTRTYDERPVVMTGPLANVLAVQQQVLDRMASAPAKAIEQI 573
G++G + L G EG GHH++ + +S+P + P+ P K R ++ E N T ++I+ P++AMG+LIG+ G+ +E+ + V++ +Q+ K + EG +RG+ L+G + VA E LI +KL RR I+ G + + P+ ++W + G LIGK GS + +I + SGA++R+ E L ++ ER+VYV G K++R+ AL LI + G ++ P+ V VP + VG ++G RG I+ + EKTGA++ + + G E V + G +Q+ AAR L++RV W+ + E+ E L K ++P PLVGH+IG+GG F+RE+ S T V VKI Q+ S T D V+++G NV+ Q+ +L+R+A+ + E +
Sbjct: 15 GKRGSWRRQLLAGAGEEGGLGHHLTGIYVRSGVARLRGRRILPNSSPEDPLSQPSVSMTPPAAKRRR----SVEHHESVRNITVVKGGLSIMCPSDAMGMLIGKGGSGLREMQEKT-GVKVSLQETKSIPEGAKERGVGLSGSLDCVANVEKLIFEKLNARRVTSLAPSPAEEEFEMAYEAAKAAGIEPNGATDVSDMNDPNKITVVRWIMDNAHCGWLIGKGGSGIQNIEATSGAQVRVATERSLGK-DSAERIVYVKGNKSQREAALELI--RTNPKITGRVASPSEPEVAAVHVPSKAVGFILGHRGASIQALTEKTGAQLRVASGSEVTTGGGEHRVDITGGPKQIVAARHALQDRVAEWRTSNNPNGEPEEPEYTL-----------------------KVAVPQPLVGHIIGKGGTFVREVLSVTNVQVKIQQDTGSPTMWGDACCVMLSGTFGNVVRAQRMILERIANTSDRLKEMV 467
BLAST of NO16G00020 vs. NCBI_GenBank
Match: EWM22829.1 (hypothetical protein Naga_100733g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 115.2 bits (287), Expect = 9.300e-22 Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 0
Query: 508 RGGAFIRELHSTGVMVKILQEERSFTRTYDERPVVMTGPLANVLAVQQQVLDRMASAPAKAIEQIKPIPFPSSVP 583
+GG+FIRELH++GV+VKILQEE SFTRTYDERPV++TGPLA VLAV+QQ+LDRMASAP KAIEQIKPI SS P
Sbjct: 21 QGGSFIRELHASGVLVKILQEETSFTRTYDERPVMLTGPLATVLAVEQQLLDRMASAPPKAIEQIKPI--TSSAP 93
BLAST of NO16G00020 vs. NCBI_GenBank
Match: XP_019245584.1 (PREDICTED: protein BTR1-like isoform X2 [Nicotiana attenuata]) HSP 1 Score: 104.4 bits (259), Expect = 1.600e-18 Identity = 79/293 (26.96%), Postives = 135/293 (46.08%), Query Frame = 0
Query: 199 EELYTVTILVPNEAMGLLIGRSGATRQEIVTRADNVRLKVQDYKDMGEGCFDRGITLNGPWEKVAKAEILILQKLIDRRESIKKEGNIEDTLFAGPDPRITIKWCIPRELGGALIGKRGSTLAHISSDSGARLRLGHEEELPPGNNHERVVYVTGKKAERDKALALIQEKVG-GHHFG-----------VLSHSYGP-------------------------DAVIVKVPVRCVGTLMGSRGIKIKEIKEKTGARITFSKIGDTEMGSNESSVILDGSTRQVNAAREMLRERV 455
E +V L+ N G +IG+ G+T + +R+ R+++ + G DR + ++GP E V KA IL KL+ E +ED DPR ++ +P G +IGK G+ + DS A +++ +++ PG H+R+V VTG E+ +A+ LI K+ H+ + +YGP ++V + V +G ++G G I EI +++GARI S GD G+++ V + GS R ++ A M+ ++V
Sbjct: 40 ENTISVKFLLSNAEAGSIIGKGGSTISDFQSRS-GARIQLSRNNEFFPGTTDRIVMVSGPVEDVLKAVDFILNKLL-------SESYVEDG--GSVDPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPG-LHDRLVIVTGTLGEQMRAIELILHKLAEDSHYKQNMNAPFPYAVYVGMNYGPRNGVGGRFPNNRYQNNVQSNTEDRNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRGDFISGTSDRKVTITGSQRAISMAESMISQKV 321
BLAST of NO16G00020 vs. NCBI_GenBank
Match: XP_019245583.1 (PREDICTED: protein BTR1-like isoform X1 [Nicotiana attenuata] >OIT03277.1 protein btr1 [Nicotiana attenuata]) HSP 1 Score: 104.0 bits (258), Expect = 2.100e-18 Identity = 79/294 (26.87%), Postives = 135/294 (45.92%), Query Frame = 0
Query: 199 EELYTVTILVPNEAMGLLIGRSGATRQEIVTRADNVRLKVQDYKDMGEGCFDRGITLNGPWEKVAKAEILILQKLIDRRESIKKEGNIEDTLFAGPDPRITIKWCIPRELGGALIGKRGSTLAHISSDSGARLRLGHEEELPPGNNHERVVYVTGKKAERDKALALIQEKVG-GHHFG------------VLSHSYGP-------------------------DAVIVKVPVRCVGTLMGSRGIKIKEIKEKTGARITFSKIGDTEMGSNESSVILDGSTRQVNAAREMLRERV 455
E +V L+ N G +IG+ G+T + +R+ R+++ + G DR + ++GP E V KA IL KL+ E +ED DPR ++ +P G +IGK G+ + DS A +++ +++ PG H+R+V VTG E+ +A+ LI K+ H+ + +YGP ++V + V +G ++G G I EI +++GARI S GD G+++ V + GS R ++ A M+ ++V
Sbjct: 40 ENTISVKFLLSNAEAGSIIGKGGSTISDFQSRS-GARIQLSRNNEFFPGTTDRIVMVSGPVEDVLKAVDFILNKLL-------SESYVEDG--GSVDPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPG-LHDRLVIVTGTLGEQMRAIELILHKLAEDSHYKQNMNAPFPYAAVYVGMNYGPRNGVGGRFPNNRYQNNVQSNTEDRNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRGDFISGTSDRKVTITGSQRAISMAESMISQKV 322
BLAST of NO16G00020 vs. NCBI_GenBank
Match: XP_009607480.1 (PREDICTED: protein BTR1 isoform X2 [Nicotiana tomentosiformis]) HSP 1 Score: 102.4 bits (254), Expect = 6.200e-18 Identity = 85/315 (26.98%), Postives = 142/315 (45.08%), Query Frame = 0
Query: 177 GWKEERRQQLALLSREEEENGTEELYTVTILVPNEAMGLLIGRSGATRQEIVTRADNVRLKVQDYKDMGEGCFDRGITLNGPWEKVAKAEILILQKLIDRRESIKKEGNIEDTLFAGPDPRITIKWCIPRELGGALIGKRGSTLAHISSDSGARLRLGHEEELPPGNNHERVVYVTGKKAERDKALALIQEK------------------------------VGG------HHFGVLSHSY-GPDAVIVKVPVRCVGTLMGSRGIKIKEIKEKTGARITFSKIGDTEMGSNESSVILDGSTRQVNAAREMLRERV 455
G +E LS + E +V L+ N G +IG+ G+T + R+ R+++ + G DR + ++GP E V KA IL KL+ ++ GN+ DPR ++ +P G +IGK G+ + DS A +++ +++ PG H+R+V VTG E+ +A+ LI K VGG + V S+S G ++V + V +G ++G G I EI +++GARI S GD G+++ V + GS R ++ A M+ ++V
Sbjct: 17 GLQEHSSSPRKSLSPPPSSDHEENTISVKFLLSNAEAGSIIGKGGSTISDFQIRS-GARIQLSRNNEFFPGTMDRIVMVSGPVEDVLKAVDFILNKLL-CESYVEDGGNV--------DPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPG-LHDRLVIVTGTLGEQMRAIELILHKLAEDSHYIQNMNAPFPYAVYVGMNYGPRNGVGGRFPANRYQNNVQSNSEDGNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRGDFISGTSDRKVTITGSQRAISMAESMISQKV 320
BLAST of NO16G00020 vs. NCBI_GenBank
Match: XP_016454010.1 (PREDICTED: protein BTR1-like isoform X2 [Nicotiana tabacum]) HSP 1 Score: 102.4 bits (254), Expect = 6.200e-18 Identity = 77/289 (26.64%), Postives = 134/289 (46.37%), Query Frame = 0
Query: 203 TVTILVPNEAMGLLIGRSGATRQEIVTRADNVRLKVQDYKDMGEGCFDRGITLNGPWEKVAKAEILILQKLIDRRESIKKEGNIEDTLFAGPDPRITIKWCIPRELGGALIGKRGSTLAHISSDSGARLRLGHEEELPPGNNHERVVYVTGKKAERDKALALIQEKVG--GHHFG----------VLSHSYGP-------------------------DAVIVKVPVRCVGTLMGSRGIKIKEIKEKTGARITFSKIGDTEMGSNESSVILDGSTRQVNAAREMLRERV 455
+V L+ N G +IG+ G+T + R+ R+++ + G DR + ++GP E V KA IL KL+ ++ GN+ DPR ++ +P G +IGK G+ + DS A +++ +++ PG H+R+V VTG E+ +A+ LI K+ H+ + +YGP ++V + V +G ++G G I EI +++GARI S GD G+++ V + GS R ++ A M+ ++V
Sbjct: 43 SVKFLLSNAEAGSIIGKGGSTISDFQIRS-GARIQLSRNNEFFPGTMDRIVMVSGPVEDVLKAVDFILNKLL-CESYVEDGGNV--------DPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPG-LHDRLVIVTGTLGEQMRAIELILHKLAEDSHYIQNMNAPFPYAVYVGMNYGPRNGVGGRFPANRYQNNVQSNSEDRNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRGDFISGTSDRKVTITGSQRAISMAESMISQKV 320
BLAST of NO16G00020 vs. NCBI_GenBank
Match: XP_020461271.1 (RNA-binding protein Nova-1-like [Monopterus albus]) HSP 1 Score: 102.4 bits (254), Expect = 6.200e-18 Identity = 73/269 (27.14%), Postives = 125/269 (46.47%), Query Frame = 0
Query: 190 SREEEENGTEELYTVTILVPNEAMGLLIGRSGATRQEIVTRADNVRLKVQDYKDMGEGCFDRGITLNGPWEKVAKAEILILQKLIDRRESIKKE---GNIEDTLFAGPDPRITIKWCIPRELGGALIGKRGSTLAHISSDSGARLRLGHEEELPPG-NNHERVVYVTGKKAERDKALALIQEKVGGHHFGVLSHSYGPDAVIVKVPVRCVGTLMGSRGIKIKEIKEKTGARITFSKIGDTEMGSNESSVILDGSTRQVNAAREMLRERV 455
S + G E Y + +L+P+ A G +IG+ G T ++ + +K+ KD G +R + G E + I +K+ + +S +K ++ PD K +P G +IGK G+T+ + SGA ++L + P G N ERVV ++G+ + KA+ +I +K+ + V + VP VG ++G G + E +E TGARI SK G+ G+ V + GS AA+ ++ +R+
Sbjct: 45 STKRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQL-QKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQTEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQYLISQRI 309
BLAST of NO16G00020 vs. NCBI_GenBank
Match: XP_009607479.1 (PREDICTED: protein BTR1 isoform X1 [Nicotiana tomentosiformis]) HSP 1 Score: 102.1 bits (253), Expect = 8.200e-18 Identity = 85/316 (26.90%), Postives = 142/316 (44.94%), Query Frame = 0
Query: 177 GWKEERRQQLALLSREEEENGTEELYTVTILVPNEAMGLLIGRSGATRQEIVTRADNVRLKVQDYKDMGEGCFDRGITLNGPWEKVAKAEILILQKLIDRRESIKKEGNIEDTLFAGPDPRITIKWCIPRELGGALIGKRGSTLAHISSDSGARLRLGHEEELPPGNNHERVVYVTGKKAERDKALALIQEK-------------------------------VGG------HHFGVLSHSY-GPDAVIVKVPVRCVGTLMGSRGIKIKEIKEKTGARITFSKIGDTEMGSNESSVILDGSTRQVNAAREMLRERV 455
G +E LS + E +V L+ N G +IG+ G+T + R+ R+++ + G DR + ++GP E V KA IL KL+ ++ GN+ DPR ++ +P G +IGK G+ + DS A +++ +++ PG H+R+V VTG E+ +A+ LI K VGG + V S+S G ++V + V +G ++G G I EI +++GARI S GD G+++ V + GS R ++ A M+ ++V
Sbjct: 17 GLQEHSSSPRKSLSPPPSSDHEENTISVKFLLSNAEAGSIIGKGGSTISDFQIRS-GARIQLSRNNEFFPGTMDRIVMVSGPVEDVLKAVDFILNKLL-CESYVEDGGNV--------DPRSKVRLVVPNSSCGGIIGKGGAMIKAFIEDSHAGIKISSQDDNFPG-LHDRLVIVTGTLGEQMRAIELILHKLAEDSHYIQNMNAPFPYAAVYVGMNYGPRNGVGGRFPANRYQNNVQSNSEDGNNSVTIGVADEHIGLVLGRNGRSIMEISQQSGARIKISDRGDFISGTSDRKVTITGSQRAISMAESMISQKV 321 The following BLAST results are available for this feature:
BLAST of NO16G00020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO16G00020 ID=NO16G00020|Name=NO16G00020|organism=Nannochloropsis oceanica|type=gene|length=10851bpback to top protein sequence of NO16G00020.1 >NO16G00020.1-protein ID=NO16G00020.1-protein|Name=NO16G00020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=774bpback to top Synonyms
Publications
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