NO15G03260, NO15G03260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G03260 vs. NCBI_GenBank
Match: EWM22265.1 (Protein of unknown function DUF159 [Nannochloropsis gaditana]) HSP 1 Score: 327.0 bits (837), Expect = 8.900e-86 Identity = 171/303 (56.44%), Postives = 201/303 (66.34%), Query Frame = 0 Query: 1 MYGGDRFQPRHNLHPGHQSPVIVRDASYKKYQPHQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARALVVMHWGLIPSWHKEGEKLDFFRAFNARSETIDSKPMFRRLVSGKRCIVCMEGFYEWRKDLKGAKQPYYCHSSDPSRSLLSLAGLYDTWFHKKKGRAGKDDE------EKEVMYSYTILTTDASPSFSWLHNRMPVILQNEEEEKAWLDGG-----NVGEILSVL---RGEG-GKEGGREVPFLVCEPVSKRMSNMQYEGEDCAVPIKLEXXXXXXXXXXXKGTLYAFFG 289 +Y DRF+PRHNLHPGH SPVIVR Y+++ Q RA+VVMHWGLIPSWHKEGEKLDFFRAFNARSET+ KPMFRRL KRC+VC+EGFYEW+KD KG KQP+YCHS DPS LLSLAGLYD W+ R + DE E EV +S+TILTT+A+ SF+WLH+RMP+ILQ++EEE+AWL+GG + EIL L +GEG GK+GGREVP L+CEPVSKRM++M YEGEDCAVPI LE KGTL FFG Sbjct: 25 IYRADRFRPRHNLHPGHTSPVIVRAGGYERHCRRQ------PTTGKAKGGDTSQTRDACQEKKGEDGDLGERAVVVMHWGLIPSWHKEGEKLDFFRAFNARSETVAVKPMFRRLADTKRCLVCVEGFYEWKKDKKGQKQPFYCHSRDPSHPLLSLAGLYDVWY-----RPPRSDEKVEGAVEDEVFFSFTILTTEAASSFAWLHDRMPLILQSKEEEEAWLEGGAEGGPRIAEILPKLWGQKGEGKGKQGGREVPELICEPVSKRMNSMAYEGEDCAVPIVLE---EEGKEGGGKGTLDVFFG 313
BLAST of NO15G03260 vs. NCBI_GenBank
Match: XP_021970642.1 (uncharacterized protein LOC110865626 [Helianthus annuus] >OTG36401.1 putative embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein [Helianthus annuus]) HSP 1 Score: 170.2 bits (430), Expect = 1.400e-38 Identity = 89/192 (46.35%), Postives = 115/192 (59.90%), Query Frame = 0 Query: 77 MHWGLIPSWHKEGEKLDFFRAFNARSETIDSKPMFRRLVSGKRCIVCMEGFYEWRKDLKGAKQPYYCHSSDPSRSLLSLAGLYDTWFHKKKGRAGKDDEEKEVMYSYTILTTDASPSFSWLHNRMPVILQNEEEEKAWLDGGNVGEILSVLRGEGGKEGGREVPFLVCEPVSKRMSNMQYEGEDCAVPIKLE 269 M WGLIPS+ K+ EK D++R FNARSE+I K FRRL+SG RC+V +EGFYEW+KD KQPYY H D L A LYD+W + E EV Y++TILTT +S + WLH+RMPVIL N+E WLDG + + S+L+ E P LV PV+ M ++G DC +K+E Sbjct: 64 MKWGLIPSFTKKTEKPDYYRMFNARSESIGEKASFRRLLSGNRCLVAVEGFYEWKKD-GSKKQPYYIHLKDDRP--LVFAALYDSW----------KNSEGEVQYTFTILTTSSSSALGWLHDRMPVILGNKESTDEWLDGSSSSKFDSLLK-------PYEEPDLVWYPVTPAMGKPSFDGPDCIKEVKIE 235
BLAST of NO15G03260 vs. NCBI_GenBank
Match: XP_009358987.1 (PREDICTED: uncharacterized protein LOC103949597 [Pyrus x bretschneideri]) HSP 1 Score: 164.9 bits (416), Expect = 5.900e-37 Identity = 90/195 (46.15%), Postives = 118/195 (60.51%), Query Frame = 0 Query: 74 LVVMHWGLIPSWHKEGEKLDFFRAFNARSETIDSKPMFRRLVSGKRCIVCMEGFYEWRKDLKGAKQPYYCHSSDPSRSLLSLAGLYDTWFHKKKGRAGKDDEEKEVMYSYTILTTDASPSFSWLHNRMPVILQNEEEEKAWLDGGNVGEILSVLRGEGGKEGGREVPFLVCEPVSKRMSNMQYEGEDCAVPIKLE 269 L M WGLIPS+ K+ EK DF+R FNARSE+I K FRRLV RCIV +EGFYEW+KD KQPYY H D SR LL A LYD+W ++ E E +Y++TI+TT +S + WLH+RMPVIL ++E WLDG + S+L+ G P LV PV+ M + ++G +C I+L+ Sbjct: 61 LQCMKWGLIPSFTKKTEKPDFYRMFNARSESICEKASFRRLVPKSRCIVAVEGFYEWKKD-GSKKQPYYVHFKD-SRPLL-FAALYDSW----------ENSEGEKLYTFTIITTSSSSALGWLHDRMPVILGDKESTDTWLDGSSSSNFDSLLKPYEG-------PDLVWYPVTPAMGKVSFDGPECINEIQLK 235
BLAST of NO15G03260 vs. NCBI_GenBank
Match: XP_008372562.1 (PREDICTED: putative SOS response-associated peptidase YoqW isoform X1 [Malus domestica]) HSP 1 Score: 163.3 bits (412), Expect = 1.700e-36 Identity = 89/195 (45.64%), Postives = 117/195 (60.00%), Query Frame = 0 Query: 74 LVVMHWGLIPSWHKEGEKLDFFRAFNARSETIDSKPMFRRLVSGKRCIVCMEGFYEWRKDLKGAKQPYYCHSSDPSRSLLSLAGLYDTWFHKKKGRAGKDDEEKEVMYSYTILTTDASPSFSWLHNRMPVILQNEEEEKAWLDGGNVGEILSVLRGEGGKEGGREVPFLVCEPVSKRMSNMQYEGEDCAVPIKLE 269 L M WGLIPS+ K+ EK DF+R FNARSE+I K FRRLV RCIV +EGFYEW+KD KQPYY H D R LL A LYD+W ++ E E +Y++TI+TT +S + WLH+RMPVIL ++E WLDG + S+L+ G P LV PV+ M + ++G +C I+L+ Sbjct: 61 LQCMKWGLIPSFTKKTEKPDFYRMFNARSESICEKASFRRLVPKSRCIVAVEGFYEWKKD-GSKKQPYYVHFKD-GRPLL-FAALYDSW----------ENSEGEKLYTFTIITTSSSSALGWLHDRMPVILGDKESTDTWLDGSSSSNFDSLLKPFEG-------PDLVWYPVTSAMGKVSFDGPECINEIQLK 235
BLAST of NO15G03260 vs. NCBI_GenBank
Match: XP_004290141.1 (PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 [Fragaria vesca subsp. vesca]) HSP 1 Score: 162.2 bits (409), Expect = 3.800e-36 Identity = 97/264 (36.74%), Postives = 131/264 (49.62%), Query Frame = 0 Query: 5 DRFQPRHNLHPGHQSPVIVRDASYKKYQPHQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARALVVMHWGLIPSWHKEGEKLDFFRAFNARSETIDSKPMFRRLVSGKRCIVCMEGFYEWRKDLKGAKQPYYCHSSDPSRSLLSLAGLYDTWFHKKKGRAGKDDEEKEVMYSYTILTTDASPSFSWLHNRMPVILQNEEEEKAWLDGGNVGEILSVLRGEGGKEGGREVPFLVCEPVSKRMSNMQYEGEDCAVPIKLE 269 DR+QPR+N+ PG PV+ R L M WGLIPS+ K+ EK D +R FNARSE+I K FRRLV RC+V +EGFYEW+KD KQPYY H D R LL A LYD+W ++ E E +Y++TI+TT +S + WLH+RMPV+L ++E WLDG + +L+ G P LV PV+ M + ++G +C+ IKL+ Sbjct: 31 DRYQPRYNVSPGANLPVVRR--------------------------------------GDGADGEDGVVLHCMKWGLIPSFTKKTEKPDHYRMFNARSESICEKASFRRLVPKSRCVVAVEGFYEWKKD-GSKKQPYYVHFKD-GRPLL-FAALYDSW----------ENSEGEKLYTFTIITTSSSSALGWLHDRMPVVLGDKESVDTWLDGSSASNFDKLLKPYEG-------PDLVWYPVTPAMGKVSFDGPECSNEIKLK 236
BLAST of NO15G03260 vs. NCBI_GenBank
Match: EPS73813.1 (hypothetical protein M569_00942, partial [Genlisea aurea]) HSP 1 Score: 161.0 bits (406), Expect = 8.500e-36 Identity = 93/257 (36.19%), Postives = 128/257 (49.81%), Query Frame = 0 Query: 5 DRFQPRHNLHPGHQSPVIVRDASYKKYQPHQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARALVVMHWGLIPSWHKEGEKLDFFRAFNARSETIDSKPMFRRLVSGKRCIVCMEGFYEWRKDLKGAKQPYYCHSSDPSRSLLSLAGLYDTWFHKKKGRAGKDDEEKEVMYSYTILTTDASPSFSWLHNRMPVILQNEEEEKAWLDGGNVGEILSVLRGEGGKEGGREVPFLVCEPVSKRMSNMQYEGEDC 262 DR+QP +N+ PG PV+ RD + A+ M WGLIPS+ + +K+D F+ FNAR+E+I K FRRL+ KRC+VC+EGFYEW+KD KQPYY H SD S L LA L+D+W ++VM+++TI+TT +S S WLH+RMPVIL N+E W + G L +L+ GK L PV+ M + ++G DC Sbjct: 31 DRYQPSYNVAPGFSLPVVHRDGEKEN----------------------------------------GVAVQCMKWGLIPSFANKNDKIDHFKMFNARAESIQEKASFRRLIPNKRCLVCVEGFYEWKKD-GTKKQPYYIHFSDGSP--LVLAALFDSW----------KSSSQDVMFTFTIITTSSSTSLEWLHDRMPVILGNQESIHCWFNDGMPS--LQLLKPYEGKN-------LAWYPVTPAMGKVSFDGPDC 225
BLAST of NO15G03260 vs. NCBI_GenBank
Match: XP_008372563.1 (PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 [Malus domestica]) HSP 1 Score: 161.0 bits (406), Expect = 8.500e-36 Identity = 87/188 (46.28%), Postives = 113/188 (60.11%), Query Frame = 0 Query: 74 LVVMHWGLIPSWHKEGEKLDFFRAFNARSETIDSKPMFRRLVSGKRCIVCMEGFYEWRKDLKGAKQPYYCHSSDPSRSLLSLAGLYDTWFHKKKGRAGKDDEEKEVMYSYTILTTDASPSFSWLHNRMPVILQNEEEEKAWLDGGNVGEILSVLRGEGGKEGGREVPFLVCEPVSKRMSNMQYEGEDC 262 L M WGLIPS+ K+ EK DF+R FNARSE+I K FRRLV RCIV +EGFYEW+KD KQPYY H D R LL A LYD+W ++ E E +Y++TI+TT +S + WLH+RMPVIL ++E WLDG + S+L+ G P LV PV+ M + ++G +C Sbjct: 61 LQCMKWGLIPSFTKKTEKPDFYRMFNARSESICEKASFRRLVPKSRCIVAVEGFYEWKKD-GSKKQPYYVHFKD-GRPLL-FAALYDSW----------ENSEGEKLYTFTIITTSSSSALGWLHDRMPVILGDKESTDTWLDGSSSSNFDSLLKPFEG-------PDLVWYPVTSAMGKVSFDGPEC 228
BLAST of NO15G03260 vs. NCBI_GenBank
Match: XP_008458105.1 (PREDICTED: putative SOS response-associated peptidase YobE isoform X1 [Cucumis melo]) HSP 1 Score: 160.6 bits (405), Expect = 1.100e-35 Identity = 85/195 (43.59%), Postives = 116/195 (59.49%), Query Frame = 0 Query: 74 LVVMHWGLIPSWHKEGEKLDFFRAFNARSETIDSKPMFRRLVSGKRCIVCMEGFYEWRKDLKGAKQPYYCHSSDPSRSLLSLAGLYDTWFHKKKGRAGKDDEEKEVMYSYTILTTDASPSFSWLHNRMPVILQNEEEEKAWLDGGNVGEILSVLRGEGGKEGGREVPFLVCEPVSKRMSNMQYEGEDCAVPIKLE 269 L M WGLIPS+ ++ EK ++F+ FNARSE+I KP F RLV +RC+V +EGFYEW+KD KQPYY H D L+LA LYD W ++ E E++Y++TILTT SP+ WLH+RMPVIL ++E WLD + + +V + E P LV PV+ M ++G DC I+L+ Sbjct: 61 LQCMKWGLIPSFTEKFEKPNYFKMFNARSESIHEKPSFHRLVPKRRCLVAVEGFYEWKKD-GSKKQPYYIHFKDGKP--LALAALYDCW----------ENLEGELLYTFTILTTSPSPALKWLHDRMPVILGDKERMDMWLDDSSSSKYDTVFK-------PYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLK 235
BLAST of NO15G03260 vs. NCBI_GenBank
Match: XP_004290142.2 (PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X1 [Fragaria vesca subsp. vesca]) HSP 1 Score: 160.6 bits (405), Expect = 1.100e-35 Identity = 97/265 (36.60%), Postives = 132/265 (49.81%), Query Frame = 0 Query: 5 DRFQPRHNLHPGHQSPVIVRDASYKKYQPHQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARALVVMHWGLIPSWHKEGEKLDFFRAFNARSETIDSKPMFRRLVSGKRCIVCMEGFYEWRKDLKGAKQPYYCHSSDPSRSLLSLAGLYDTWFHKKKGRAGKDDEEK-EVMYSYTILTTDASPSFSWLHNRMPVILQNEEEEKAWLDGGNVGEILSVLRGEGGKEGGREVPFLVCEPVSKRMSNMQYEGEDCAVPIKLE 269 DR+QPR+N+ PG PV+ R L M WGLIPS+ K+ EK D +R FNARSE+I K FRRLV RC+V +EGFYEW+KD KQPYY H D R LL A LYD+W + + + E E +Y++TI+TT +S + WLH+RMPV+L ++E WLDG + +L+ G P LV PV+ M + ++G +C+ IKL+ Sbjct: 31 DRYQPRYNVSPGANLPVVRR--------------------------------------GDGADGEDGVVLHCMKWGLIPSFTKKTEKPDHYRMFNARSESICEKASFRRLVPKSRCVVAVEGFYEWKKD-GSKKQPYYVHFKD-GRPLL-FAALYDSWENSEGTNVYTECETAGEKLYTFTIITTSSSSALGWLHDRMPVVLGDKESVDTWLDGSSASNFDKLLKPYEG-------PDLVWYPVTPAMGKVSFDGPECSNEIKLK 247
BLAST of NO15G03260 vs. NCBI_GenBank
Match: XP_012833571.1 (PREDICTED: embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein [Erythranthe guttata] >EYU40658.1 hypothetical protein MIMGU_mgv1a008176mg [Erythranthe guttata]) HSP 1 Score: 159.8 bits (403), Expect = 1.900e-35 Identity = 92/264 (34.85%), Postives = 130/264 (49.24%), Query Frame = 0 Query: 5 DRFQPRHNLHPGHQSPVIVRDASYKKYQPHQARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARALVVMHWGLIPSWHKEGEKLDFFRAFNARSETIDSKPMFRRLVSGKRCIVCMEGFYEWRKDLKGAKQPYYCHSSDPSRSLLSLAGLYDTWFHKKKGRAGKDDEEKEVMYSYTILTTDASPSFSWLHNRMPVILQNEEEEKAWLDGGNVGEILSVLRGEGGKEGGREVPFLVCEPVSKRMSNMQYEGEDCAVPIKLE 269 DR++P HN+ PG PV+ RD L M WGLIPS+ K+ EK+D FR FNARSE+I K FRRL+ RC+V +EGFYEW+KD KQPYY H D R L+ A L+D+W ++ E E++Y++TI TT +S S WLH+RMPVIL+N+E WL+ ++ +L+ ++ L PV+ M + ++G +C +K E Sbjct: 31 DRYRPSHNVAPGFNVPVVRRD---------------------------------------DEGDGGGAVLHCMKWGLIPSFTKKTEKIDHFRMFNARSESIREKASFRRLLPKNRCLVSVEGFYEWKKD-GSRKQPYYIHFKD-GRPLV-FAALFDSW----------ENAEGEILYTFTICTTSSSSSLEWLHDRMPVILRNKESTDCWLNDSSLSNFDKILKPYEDED-------LAWYPVTSAMGKLSFDGPECIKEVKTE 235 The following BLAST results are available for this feature:
BLAST of NO15G03260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G03260 ID=NO15G03260|Name=NO15G03260|organism=Nannochloropsis oceanica|type=gene|length=1693bpback to top protein sequence of NO15G03260.1 >NO15G03260.1-protein ID=NO15G03260.1-protein|Name=NO15G03260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=442bpback to top Synonyms
Publications
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