NO15G03200, NO15G03200 (gene) Nannochloropsis oceanica

Overview
NameNO15G03200
Unique NameNO15G03200
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1688
Alignment locationchr15:905801..907488 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:905801..907488 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G03200 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G03200.1NO15G03200.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|445985gene_4886Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G03200.1NO15G03200.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G03200 ID=NO15G03200|Name=NO15G03200|organism=Nannochloropsis oceanica|type=gene|length=1688bp
ACAGTTTTCTTCTCACTTTCAGCGCCAAGCTACCATGTTCCGCCACTCTG
CTCTCCTCTTTGTGGCCCTCCTCTGCGTGGCGGgtaagtaagtggaggaa
gatgctgtgatggacttacttgtaagagcaaaggcaacatgctcgtaaaa
tctcctcaaaatatgtcgtgcagagctgcttcgcgtgtccttttgtcaag
ttcctttggcttactatttatggcgcaagtctaagtaggccgatcgacat
tgtgtcttacagacatcatcccctcatgggcacggtcaaggctattgaac
taggataatccatcacaaccacaccacacatgcactcattgcaatagATG
CCCAATTTGAAGCCCTGACCGTGAACAAGAACAAGACCAAGACGGGCAAC
AAGCTACCGAAAGGTACCCACAACGAGAAGACCAAACTGCGCAAGGTGGA
TGGCTTCAACCTCTGTACCCAGGAATATGATGCCTACATCGGCGCGGCAG
GTATCGCTGGAACAGGCGCATTTTCGTACCGCGTTTACCCTGGAGACTGC
GATGAGgtacgccagaatgacgaaagcatctttcccagaccttatatatc
tattcacgttgtatggtaccggacagaaaggtgcctggcccttaactcac
cggagtacatctcacaatgaattatcagGTGGATTCCACGACCGCGCAAA
TCGGCTCCTTGGCCGCCACGTGCTCTGGCAACCCCTACGAGGGCGTGACC
TTCACCATAAACACTCCAGCATCCACCGAAGGCTTCTCCAATCCTTTGGA
TGAAGTTGGACCGTGCACTGACATAGCTGGCTGCACTTACGACCCCTCTG
GCGCGCCTCAATTTTTGGAAAGTCTAATTCCTGATATTGTTATCCCCGAT
AATGTTACCAGTGACGAGGTGCAGGCGTTTGTGAATGACACGTGCCTTGA
CATACTGGAAAACTTCGACCTTTTTAAACTTTCCGATTGCTCCGCCGAGC
TTCGCCTTAGCGGGGACCACCGCAAGAACAAGCATCCGGGAAGTACTTTG
TCTTTCGACTTTATGACCAACACCACTTTAGTCCCCGgtacgttgtagcg
actatacatttgaaagcatgcgtgtcaaagagaggggatagggtcgatgc
atttgagtttgtgattggaaaatattttcctaaacctcaatccaacaatc
ccacgtctcgcaccatgaataagatcctcaccatcctccccttcttccct
cccatgtttattatcacatctttcccgaagCTGGCAGCACCTACACAACC
ATCACTCAGTACGGACTTGGCGGAACTGCTGATAATACTACTTTTGCTGG
TGTTGGTACTTTTACTCATGTTACCTCTGTAGACTTGTTCGCTTACCAGG
TGATCGACAGCATCACGTGCGTTGTCCGGCCTGATACGATTGACACGACG
TTCAGTAAGATCTATAGTGGAAGCGGCCGCTTTGCAAAATACCCTGCCTC
GAAGGTGGCGTCGGTGGAATTAGATACGATTTTGGTTGAGTCTCCCGAGA
ATGCACTTAATCCTATCAACTCGTTCCAGATTTTGAGCCAGATATGGGAG
ACCCAGCTGGAGGTGAAGTATGTGAAGCCTTACCTTCATTCCAGCATGCT
CTAATTTGGCTATAGGCCTGACAGCTGTATTGATCAAG
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protein sequence of NO15G03200.1

>NO15G03200.1-protein ID=NO15G03200.1-protein|Name=NO15G03200.1|organism=Nannochloropsis oceanica|type=polypeptide|length=347bp
MFRHSALLFVALLCVADAQFEALTVNKNKTKTGNKLPKGTHNEKTKLRKV
DGFNLCTQEYDAYIGAAGIAGTGAFSYRVYPGDCDEVDSTTAQIGSLAAT
CSGNPYEGVTFTINTPASTEGFSNPLDEVGPCTDIAGCTYDPSGAPQFLE
SLIPDIVIPDNVTSDEVQAFVNDTCLDILENFDLFKLSDCSAELRLSGDH
RKNKHPGSTLSFDFMTNTTLVPAGSTYTTITQYGLGGTADNTTFAGVGTF
THVTSVDLFAYQVIDSITCVVRPDTIDTTFSKIYSGSGRFAKYPASKVAS
VELDTILVESPENALNPINSFQILSQIWETQLEVKYVKPYLHSSML*
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Synonyms
Publications