NO15G03150, NO15G03150 (gene) Nannochloropsis oceanica

Overview
NameNO15G03150
Unique NameNO15G03150
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2349
Alignment locationchr15:880134..882482 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:880134..882482 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO15G03150 vs. NCBI_GenBank
Match: XP_005855140.1 (hypothetical protein NGA_0090700 [Nannochloropsis gaditana CCMP526] >EKU21222.1 hypothetical protein NGA_0090700 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 246.5 bits (628), Expect = 1.100e-61
Identity = 164/320 (51.25%), Postives = 187/320 (58.44%), Query Frame = 0
Query:   35 SASFALGTKTTRPWMSAVRDALASPQRALQSQALVQSLLDKGPVPGPQREFLINGWRWHSRSVLRDVRRFKEVAKRERRELMTGVEGPSRLPACYDFFWSFSWVALLKIESDIFYPFLRKTLPKDLRPVLDDLEEQGR------------------------------------------------------------------------------------------QVATLGQR---LGLVLQAFRDPSSXXXXXXXXXXXXXXSHLARLDDALALAGELEVRAEGLIDQQEEVLVPVVAAYLTGREQKKFNNKVIAS 262
            SASFALGT + RP MS+VRDALASPQ+A Q QALVQSLL  GPVP   R+FLINGWRWHSRSVLRDVRRF+EVA RER+E++ GVEG SRLPACYDFFWSFSWVALLKIE+ IFYPFLRKTLP DLRP+L DLE QG                                                                                           QV TLGQR                XXXXXXXXXXXXXXS LARLD+AL+LAG++EV+ + +ID Q+ +LVPVVAAYL+ +EQKKFNNK  ++
Sbjct:   35 SASFALGTFSMRPMMSSVRDALASPQKAFQKQALVQSLL--GPVPPSDRDFLINGWRWHSRSVLRDVRRFQEVATRERQEVLRGVEGSSRLPACYDFFWSFSWVALLKIENQIFYPFLRKTLPSDLRPLLQDLERQGEEVGGRVLSWFSFLADLSSHHWRLRLLFLVPTEPFACRGLRPGPGARLGGRAPASPVILLQVWFAAPPHSLDCPFLLPVLLYFLSSPVTNLQVTTLGQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRLARLDEALSLAGKMEVKVKDMIDTQDSMLVPVVAAYLSQKEQKKFNNKAAST 352          
BLAST of NO15G03150 vs. NCBI_GenBank
Match: CBN78966.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 169.5 bits (428), Expect = 1.700e-38
Identity = 105/278 (37.77%), Postives = 148/278 (53.24%), Query Frame = 0
Query:   52 VRDALASPQRALQSQALVQSL----LDKGPVPGPQREFLINGWRWHSRSVLRDVRRFKEVAKRERRELMTGVEG--------PSRLPACYDFFWSFSWVALLKIESDIFYPFLRKTLPKDLRPVLDDLEEQGRQVATLGQRLG-LVLQAFRDPSSXXXXXXXXXXXXXXSHLARLDDALALAGELEVRAEGLIDQQEEVLVPVVAAYLTGREQKKFNNKVIASLGIFNSRVHLVSMAEAVRGDAVEEMKFKGQIPGIAQALLGRWRERLYRPLAVCLE 317
            VRD     Q  + S     S+     D  PVP  +R F +NGWRWHSR+VLRD+ RF+  A     E   G +G          R+  CY F W+FS   L   E+ +F+P+LR  +PK++ P L + + +   V  +G+++G  V +A R  +S              S  A L     LA ELE +A  L   QE  +VPV AAY T ++Q KFN+KVI SLG+ +++V LV+M +A++ D  E  KF+  +P  A+AL+  WR  LY P A CLE
Sbjct:   70 VRDGKRRVQMQVMSMVPDTSMDAKCFDDAPVPVDERGFHVNGWRWHSRAVLRDIARFRRAALL-AAEATGGADGGGEKGAAAVERVAKCYGFMWTFSVTKLHNTETSLFFPWLRDLVPKEVLPPLSEFDREREGVVRIGKKIGQFVAEAERASAS-----------KSSSPRAALLRCAELAEELEAKAARLARVQEAAIVPVTAAYATSKQQWKFNDKVIFSLGLVDAQVFLVAMHDAIKSDREEFNKFRKNVPKFARALIPTWRRVLYLPRAGCLE 335          
BLAST of NO15G03150 vs. NCBI_GenBank
Match: XP_002177802.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50616.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 115.5 bits (288), Expect = 2.900e-22
Identity = 77/257 (29.96%), Postives = 126/257 (49.03%), Query Frame = 0
Query:   65 SQALVQSLLDKGPVPGPQREFLINGWRWHSRSVLRDVRRFKEVAKRERRELMTGVEGPSRLPACYDFFWSFSWVALLKIESDIFYPFLRKTL---------PKDLRPVLDDLEEQGRQVATLGQRLGLVLQAFRDPSSXXXXXXXXXXXXXXSHLARLDDALALAGELEVRAEGLIDQQEEVLVPVVAAYLTGREQKKFNNKVIASLGIFNSRVHLVSMAEAV-RGDAVEEMK-FKGQIPGIAQALLGRWRERLYRP 311
            ++A +   L+  P  G   +F + GWRWH+ S++R+  R  ++A +   +  +  +    L    D+   F+   L KIE D+F+P++RK +          K    V+D LE   + + TLG  L  + +   D  +                +   D   +++  L      +++++++ LVP VA  +   EQK FNNKVI +LG+F+SRVHLV M EAV + D   E K F   IP I + ++ RW+  LY P
Sbjct:   51 AEAKIADFLEATPTNG---KFHVQGWRWHTMSLVREADRLNKLATKLLEK--SSSDEAHSLEKEVDYVVGFNMKGLHKIERDLFFPWVRKKMELSIKNPDFAKAFSTVMDQLEGDRQTMETLGMSLAEITRMAADSDNPSNV-----------RMDAYDAVASMSATLAKYGRAMLEREDKFLVPAVANIVPESEQKSFNNKVIRNLGVFDSRVHLVGMHEAVWQLDKESERKLFDETIPSIPRKMIPRWKRLLYEP 291          
BLAST of NO15G03150 vs. NCBI_GenBank
Match: GAX15914.1 (hypothetical protein FisN_UnNu065 [Fistulifera solaris])

HSP 1 Score: 110.2 bits (274), Expect = 1.200e-20
Identity = 67/238 (28.15%), Postives = 119/238 (50.00%), Query Frame = 0
Query:   85 FLINGWRWHSRSVLRDVRRFKEVAKRERRELMTGVEGPSRLPACYDFFWSFSWVALLKIESDIFYPFLRKTLP-------KDLRPVLDDLEEQGRQVATLGQRL---GLVLQAFRDPSSXXXXXXXXXXXXXXSHLARLDDALALAGELEVRAEGLIDQQEEVLVPVVAAYLTGREQKKFNNKVIASLGIFNSRVHLVSMAEAVRGDAVEEMKFKGQIPGIAQALLGRWRERLYRPLA 313
            F I GWRWH+ S+ R   R +++A R   +        + +    +    F+  AL +IE+D+F+P++RK +          +  +L++LEE  + V  LG ++     ++ +  DP+                    +      + ++  +   ++  +   LVP +A  +   +QK FNN+VI +LGI++SR+HLV M EA+ GD VE   F+  IP +A+ ++ RW+  LY P+A
Sbjct:   69 FQIQGWRWHTMSLARQAERLQQLALRRPHD-------TALIQRAVNHVVGFNMKALHQIETDLFFPWVRKQISAKNPVVGSAIHVILEELEELRQSVQILGSQMNQDATLVASSSDPA--------------------VLSIAECSAQVAQQTRSMLHLENTYLVPTIARLIPETDQKSFNNQVIRNLGIWDSRLHLVGMYEAISGDPVEMKLFEQIIPSLARKMIPRWKRLLYEPVA 279          
BLAST of NO15G03150 vs. NCBI_GenBank
Match: GAX12679.1 (hypothetical protein FisN_UnNu037 [Fistulifera solaris])

HSP 1 Score: 107.5 bits (267), Expect = 8.000e-20
Identity = 71/235 (30.21%), Postives = 115/235 (48.94%), Query Frame = 0
Query:   85 FLINGWRWHSRSVLRDVRRFKEVAKRERRELMTGVEGPSRLPACYDFFWSFSWVALLKIESDIFYPFLRK-------TLPKDLRPVLDDLEEQGRQVATLGQRLGLVLQAFRDPSSXXXXXXXXXXXXXXSHLARLDDALALAGELEVRAEGLIDQQEEVLVPVVAAYLTGREQKKFNNKVIASLGIFNSRVHLVSMAEAVRGDAVEEMKFKGQIPGIAQALLGRWRERLYRPLA 313
            F I GWRWH+ S+ R   R +++A R   +  T V     +        +F+  AL +IE+D+F+P++RK        +   +  VL++LEE  + V  LG ++     A   PSS                          + ++  +   ++  +   LVP +A  +   EQK FNN+VI +LGI++SR+HLV M EA+  D  E   F+  IP +A+ ++ RW+  LY P+A
Sbjct:   67 FQIQGWRWHTMSLARQAERLQQLAVRRPHD--TAV-----ITRAVQHVVNFNMKALHQIETDLFFPWVRKQIATKNPAIGSAIHVVLEELEELRQSVQILGSQMN--QDATLIPSSSA-------------------SIAERSAQVAQQTRSMLHLENTYLVPTIARIIPESEQKSFNNQVIRNLGIWDSRLHLVGMYEAIADDPTEMKLFEQIIPSLARKMIPRWKRLLYEPVA 273          
BLAST of NO15G03150 vs. NCBI_GenBank
Match: XP_005535207.1 (hypothetical protein CYME_CMB115C [Cyanidioschyzon merolae strain 10D] >BAM78921.1 hypothetical protein CYME_CMB115C [Cyanidioschyzon merolae strain 10D])

HSP 1 Score: 93.6 bits (231), Expect = 1.200e-15
Identity = 60/227 (26.43%), Postives = 105/227 (46.26%), Query Frame = 0
Query:   85 FLINGWRWHSRSVLRDVRRFKEVAKRERRELMTGVEGPSRLPACYDFFWSFSWVALLKIESDIFYPFLRKTLPKD-LRPVLDDLEEQGRQVATLGQRLGLVLQAFRDPSSXXXXXXXXXXXXXXSHLARLDDALALAGELEVRAEGLIDQQEEVLVPVVAAYLTGREQKKFNNKVIASLGIFNSRVHLVSMAEAVRGDAVEEMKFKGQIPGIAQALLGRWRERLYRP 311
            F I+GWRWH  +++RD +RF+   ++ + +          L +   +    +      +++++F PFL+K LP +   P+   +E   R +  L +R+   ++A   PS                H  RL+ A  L   L  + E     Q+ +++  VA  +    Q+ F  +V   L +   R+H+VS  EA++ D  E  +FK  +P   + LLG WR+R Y P
Sbjct:  147 FHIHGWRWHQAALVRDAKRFESAVRKSKCDWGGNQCSAQSLNSAVRWLLDTNLRDFRLVQNEVFLPFLQKNLPTETFAPIQRTIERHDRCIQELEKRIRDEVEACAIPSQ------------CPQHRQRLEQAARL---LSRQMEQAYTSQQLMVIATVAERIPTSVQRGFEEQVRRRLSMEQKRLHVVSFHEAIKDDPEELARFKATLPAPVRLLLGNWRKRWYLP 358          
BLAST of NO15G03150 vs. NCBI_GenBank
Match: OEU15311.1 (hypothetical protein FRACYDRAFT_269311 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 70.1 bits (170), Expect = 1.400e-8
Identity = 35/88 (39.77%), Postives = 54/88 (61.36%), Query Frame = 0
Query:  234 QEEVLVPVVAAYLTGREQKKFNNKVIASLGIFNSRVHLVSMAEAVRGDA-----VEEMKFKGQIPGIAQALLGRWRERLYRPLAVCLE 317
            +++ LVP +A  +  REQK FNNKV+  LG+ +SR+HLV M +A+  +       E+  F+  IP I++ L+ RW  +LY+P    LE
Sbjct:    5 EDKWLVPAIANIVPEREQKSFNNKVLLKLGLLDSRLHLVGMYDAIMEEGNDESLKEQELFQRAIPSISRRLIPRWNRKLYQPKTYMLE 92          
The following BLAST results are available for this feature:
BLAST of NO15G03150 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 7
Match NameE-valueIdentityDescription
XP_005855140.11.100e-6151.25hypothetical protein NGA_0090700 [Nannochloropsis ... [more]
CBN78966.11.700e-3837.77conserved unknown protein [Ectocarpus siliculosus][more]
XP_002177802.12.900e-2229.96predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX15914.11.200e-2028.15hypothetical protein FisN_UnNu065 [Fistulifera sol... [more]
GAX12679.18.000e-2030.21hypothetical protein FisN_UnNu037 [Fistulifera sol... [more]
XP_005535207.11.200e-1526.43hypothetical protein CYME_CMB115C [Cyanidioschyzon... [more]
OEU15311.11.400e-839.77hypothetical protein FRACYDRAFT_269311 [Fragilario... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL146nonsL146Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001257NSK001257Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G03150.1NO15G03150.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670600gene_4880Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G03150.1NO15G03150.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G03150 ID=NO15G03150|Name=NO15G03150|organism=Nannochloropsis oceanica|type=gene|length=2349bp
CATCAGCTTGCACGGCCACCTTCCGCCATGACGACCACAAAATTTGTCAG
AAGACATTTCCGTTTCTGGCACCACCACCCGCCCTCCCTACTCCTTCTCC
TTCTCCTCATGGCGTCCCTCCTCTTGCGCTCCGCCTCATTTGCCCTTGGG
ACCAAAACGACCCGCCCCTGGATGTCCGCCGTGCGTGATGCCTTAGCGTC
GCCGCAGAGGGCGCTGCAAAGCCAAGCCCTTGTGCAGTCGTTGCTAGgtc
cgtcgtcgtgtgatatagtcatgtgggggagttaggaaagctttcctggg
agatggtacgcgggagtgcaccctgcctccctccctccgcaccgtcttcg
tcaccctttccctcctcactcacttgcattttcgcccttcttgacgatcg
ttggagcaccatatcctcgtcttgccgggagccctccttccctgcacaca
cactcaccttcctccctgcctccctccctcgctcccttcttatcagATAA
GGGTCCCGTGCCCGGTCCTCAGCGCGAATTCCTGATTAATGGTTGGCGGT
GGCACTCTAGGAGCGTCTTGCGGGATGTGCGGCGTTTTAAAGAGGTGGCT
AAGAGGGAGAGGCGGGAGTTGATGACGGGGGTGGAGGGACCGAGgtaggg
aaggagggaaagacgagaggcgagggaggggagggagggagaggggagag
aggggaagaagggagtgaaggagaaaaaattacaggagagggaggaaacc
actatttacggattgatgggaagttatttttgcaatgacatgggttgaac
ctcaccctcccttctttccctctctttctctttttttttctctctctctc
tctctctctctctcactcactcttgtctctctctcgctctctcgccctca
gCCGCCTCCCCGCCTGCTACGATTTCTTTTGGAGCTTCTCCTGGGTGGCC
CTGCTTAAGATTGAGAGCGATATCTTCTACCCTTTCCTGAGGAAGACCCT
TCCCAAGGACCTGAGGCCCGTCTTGGACGATCTGGAGGAGCAGGGACGTC
AGgtacacaaattccctccctccctccctccctccctccctccctccttc
cccccctccctccctccttccccccctccctccaaccctgctgttttgcg
tatcttaacttttcaagcacggtacttacatattagcctgccctccctcc
ctttctccatccttcgactcccctcccagGTGGCCACCCTCGGTCAGCGC
CTCGGCCTCGTCCTCCAAGCCTTCCGCGACCCCTCGTCTTCCCCCTCCTC
CCCCCCGCCCTCCCTCCCTTCCTCCTCCTCCTCCCATTTGGCCCGGCTCG
ATGATGCCTTGGCCCTGGCGGGGGAGCTGGAGGTGAGGGCCGAGGGGCTG
ATTGACCAGCAGGAAGAGGTGTTGGTGCCAGTGGTGGCGGCGTATCTGAC
GGGAAGGGAGCAGAAGAAATTCAATAACAAGGgtaaggagaagaggagca
ttgtatctgttgttgttagtgtgttatattactatctcggtcatcattat
tgtcacgagtagttctgctgtggtcgtagcagtagtgagagtagtggtag
aaatacagtcaccgtgacgaaaaatggagctttcgttcctcctcccctgt
ctccttgacgtgtcgattactcttaccctccctccctccctccctccctc
caccccaccctttcctgagcctcgtcttgttttcaaaggagaaaaatgtg
gcagtctcactcccccccccctcctcctgtttcccagTCATCGCATCGCT
CGGTATCTTCAACAGCCGCGTGCATTTGGTGAGCATGGCCGAGGCCGTCC
GAGGCGACGCAGTGGAGGAAATGAAGTTTAAGGGTCAGATTCCTGGCATT
GCACAAGCGCTCTTAGGCCGGTGGAGGGAGAGGCTCTACCGGCCTCTGGC
AGTGTGCTTGGAGTAAGGCCAGAGGGGGAAGAGAGGACAGGAGGCTGCTT
GGAGTAAGGCCAGAGGGGGAAGAGAGGACAGGAGAACGTGTGTGTGTATA
TATATATGAGAAGAGGAAGTAGAGTTGGTACGGTGATTTCTCTTTGCCTC
CCCTGGGGAATGATGTTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGATGCGGGCAATTTGTACGCTCAGGAAGGAGGGTGTAGAATAGGAAGGT
GAGGAAGAAATAGAAGAAGAAGGAGGAGGACAAGGACGACTCGAAGAAAA
AATAGGAGAAGGGGAAGAAGATAAAGAAATAAGGGTCGAAGGGGAAGGAG
AAATCGAATAAAAGGAAGAAATAGAACTTCCTCGCGTGGTTTTGAGGTT
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protein sequence of NO15G03150.1

>NO15G03150.1-protein ID=NO15G03150.1-protein|Name=NO15G03150.1|organism=Nannochloropsis oceanica|type=polypeptide|length=317bp
MTTTKFVRRHFRFWHHHPPSLLLLLLLMASLLLRSASFALGTKTTRPWMS
AVRDALASPQRALQSQALVQSLLDKGPVPGPQREFLINGWRWHSRSVLRD
VRRFKEVAKRERRELMTGVEGPSRLPACYDFFWSFSWVALLKIESDIFYP
FLRKTLPKDLRPVLDDLEEQGRQVATLGQRLGLVLQAFRDPSSSPSSPPP
SLPSSSSSHLARLDDALALAGELEVRAEGLIDQQEEVLVPVVAAYLTGRE
QKKFNNKVIASLGIFNSRVHLVSMAEAVRGDAVEEMKFKGQIPGIAQALL
GRWRERLYRPLAVCLE*
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Synonyms
Publications