NO15G03140, NO15G03140 (gene) Nannochloropsis oceanica

Overview
NameNO15G03140
Unique NameNO15G03140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2710
Alignment locationchr15:877424..880133 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:877424..880133 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G03140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL146nonsL146Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001258NSK001258Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G03140.1NO15G03140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G03140.1NO15G03140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G03140 ID=NO15G03140|Name=NO15G03140|organism=Nannochloropsis oceanica|type=gene|length=2710bp
CTCACTCCTCCCCTCACTCCTCCCCGCCACACAGTCTCAAGCAACTCCAT
TGCACTCACACCCAAACCATGGAAAGCGTTATCATGGGTACCTTAGGCAT
CGCGCCCCCTTTGCCTCTTACTTCGGCGGCGTCCTTGGCGTCTTCCTGCT
CCACCTGGACCACCTGCTCCGGAGGGTCCTCCTCCTCCTCCTCCTCGGCT
TCTAGCCCATTCGGGGACGACCAAGAAGACCTCTGCGCCTTTCTCGACAC
CACTATGGATAGAAACACCATCTCTACCGGTACCACATGCAGCAGCAGCA
ACAATAGCAGTGGCAGCAGCAGCGCCTCCGCCTTGACCAACTCCGCTGTC
GCAGACGCCGCCCCAGATGTGGCGGCCGGGCACATCGCGCCCATGACAGG
AAGCAACAGCAGCAGTACCGGCAATAGTATGGGGGCAAGCATGGAAGAGC
AACGTCCTCAGCAACAACAGCAACCCCATCAGCCCCACCCATACCAGCAG
GACCATTTTCCTCCCCGCCTCTTGGCCCTGAGTGGGGACGGAGGAGGAGG
AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGGGGGGGGGAAGCG
ATACCACTGGGGGGGGCTTTGACGCTCCCCAGACCCATCATTACTCATTC
CCCGATCACGTCCACTCCAGTGAACTGCCTTCTCCTAGCCCCCAAGACTA
CGTATTTGACCTCTGGCAAGACTTCGACGGGGTTTCCCTCCTCTCGCCCA
TGTCCCTTTCCGTGATGGCCACCTTCGATGCGTTCGCCACTTCCTCTGCC
TCTCCCACGGGCGCAGCCACGGCAGCAGCAGCAGCGGCAGCAGCAGTGGC
AGCGGGATCTGTGAATAACTATCCTCCTATTTTGTTTGGTGGTGCTCTTG
GAGGAGGGGGAGAAGGAAGGGGGGGAGAGGGCGGAAGAGGCAACTTGAGG
GGGAGTGGTAGCAGCACCAGCACCAGCACCATCAGCCTGGAGGAGGACGA
CGACGATAACGATGACGAAATGGATGATGACGAGCTCAATGACGATCACC
ATGAGGACGACTATGGCCAACCGCAGCCGGGTGGGGTCGGGCGTCACTAC
ACCATTAAGAAGGAGGATGACCACCACGGGCAGACTCTTTTGGTCCTGTC
CGGCTCTCTCGCGGATCGCACCAGGAGCAGCAGCATGAGCAACAACAGCA
ATGGAAAGCGTCGACGCGTTACGTCAGGACGGATGCGCGAGGCGCAGCTG
CAGGGCGGGATGGTGACCCTTGGAGGGGGAGGAGGAGGAGGCGGGGCGAC
GGGGGGGCTCAGCTCGGCCAAGGGGATGAAGCGTGGGAAGTACCGCTGCA
AGGAGTGTGGACAATTTAAGCGAGGTCACGAATGTCTGTATCCGAAGGCG
CGACGAAGCAAGAACAAGAAAGCCATGGCGGCCGCGGCGGCGAGGGAGCG
CCAGCACCAGTTACAGCTTCGGCAGGAGGAGCAGCAGGAGCTCGAGCGGC
TCCACCACCACCACCACCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCCG
CCGCAGGCGGAGGGGTTTAGAGAGAGAGCCATGTCAGGGGGGAAGCAGGG
CGCAGCGGGGGTAATGGCAGCGTAAGGAGAGAGGGAAGGAGGGAGGGAAT
GAAGGAGGGAGAGTGGCCTTCAAATATATGTGTAGGGTGGTGGGTTTTTT
TCATGACTTGGGCATGAATAGATAATAATAATAAAAGAGAGTTTGTGGTG
TACATTCAAGTGCATGCCCTGAAGGATGACAATGGCAGCTAGAAAGATGA
AAGACGGTGAAAGAGGACAGACGAAGGGGGGGGGAAGGGACCGAGGAAGA
GAAGGAGGCTGGAATGGCTGAGACGCAGGGGGCACAATTTGAAACGAGAG
TAGGAGAGGGCGTTTCATAAATGGATAAATGGAGTGAGCATTTATTACGC
ACATATCCAACCACATGAACACGTACCAGAGCCCTAAAAATAAGCCGCCC
AAACGGAGGGTGGAATTTAAGAGAAGTCCCCGTGTCCTTCATCGGGGAGG
AAAGAGAGGGGAGGGGAAGGACGAGGGAGAGAGTGAGAGAAGGGAGTGAG
ACGGAGAGAGAGAGGGAGCAAGAGAGACGGAGAGTGAGGGAAAGGGAGAG
AGCAACGAGGAACGAGCAAGAAGTCAATGGCAGCAGCACCAGGGCAGAAG
AAACGAAAAGAGGACAAACGAGACGTCCGAAGGGACCAGTGCACAAAAGA
CATTTCATGATGGATAAGAGACCAACAAGAGAGACAGCAACAACAGCAAG
AGACTCGAAGTAGAAAGACAGAGGGGTGGCAACAATGACAAGCCTATAAG
GAACCTGCACATACATATATACACATAGCTATAGCCCCCTTCATCCACAC
TCCAAGAGGATGCACCACAATCGATTCATAAGCGGAACGAAGAACGAGAA
GAGGAAGAAGAAGAGGAAGAGGAAGAACAGGGGAACGATGGGGAGAAAAT
GGAAAAAGGAAAACCGATTCTGCGTCCAAAGACAATTCTTGTATGAGTCG
TGTTGCCTGCTTCTGACTCACTTGGGCATGTGGATGGAATGCAAACTTTC
CTTTCCCCTTTCCCCCCCGCCAAGGCCACACGACAAAGGAAACATGAAGA
AAAAGAAGATAGAGACGAAAGAGGAAACACCGACTACAAAAGAAAATAAT
CGACATCACA
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protein sequence of NO15G03140.1

>NO15G03140.1-protein ID=NO15G03140.1-protein|Name=NO15G03140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=519bp
MESVIMGTLGIAPPLPLTSAASLASSCSTWTTCSGGSSSSSSSASSPFGD
DQEDLCAFLDTTMDRNTISTGTTCSSSNNSSGSSSASALTNSAVADAAPD
VAAGHIAPMTGSNSSSTGNSMGASMEEQRPQQQQQPHQPHPYQQDHFPPR
LLALSGDGGGGGGGGGGGGGGGRGGGSDTTGGGFDAPQTHHYSFPDHVHS
SELPSPSPQDYVFDLWQDFDGVSLLSPMSLSVMATFDAFATSSASPTGAA
TAAAAAAAAVAAGSVNNYPPILFGGALGGGGEGRGGEGGRGNLRGSGSST
STSTISLEEDDDDNDDEMDDDELNDDHHEDDYGQPQPGGVGRHYTIKKED
DHHGQTLLVLSGSLADRTRSSSMSNNSNGKRRRVTSGRMREAQLQGGMVT
LGGGGGGGGATGGLSSAKGMKRGKYRCKECGQFKRGHECLYPKARRSKNK
KAMAAAAARERQHQLQLRQEEQQELERLHHHHHQQQQQQQQQQPPQAEGF
RERAMSGGKQGAAGVMAA*
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Synonyms
Publications