NO15G02910, NO15G02910 (gene) Nannochloropsis oceanica

Overview
NameNO15G02910
Unique NameNO15G02910
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3626
Alignment locationchr15:792210..795835 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:792210..795835 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO15G02910 vs. NCBI_GenBank
Match: EWM22312.1 (hypothetical protein Naga_101073g2, partial [Nannochloropsis gaditana])

HSP 1 Score: 102.8 bits (255), Expect = 7.100e-18
Identity = 63/175 (36.00%), Postives = 92/175 (52.57%), Query Frame = 0
Query:    1 MPTPAIEGLLVSLAQCLYDYPSAHYHHCQHEEAESSE-----KWGSGAVRRHLRELDEEAVDALVHALEEHIVMEALPRQQYQYQHQLGEXXXXXXXXXXXXXXXXXXXXXXXXXXXGELLKASDILQVLLSWRRTGVKAIKSCIQMIRDGQLKGRQAVWCVSEIRQALTTGEGL 171
            MP PA EG+L SL +CL+  P    HH +     S +     +WG   VRR L EL+E  + AL+ AL E+IV+EA P+ +   Q                                   +KA D+LQVLL WR+T +KAI+ C++M+  G L+G+ AV+C+SE+R+++  GE L
Sbjct:    1 MPGPATEGILSSLVRCLH-LPPPDLHHARRSNGGSGKEEEPCRWGPRGVRRRLEELEESEIQALLDALREYIVVEANPQSR---QATFKGHARVLDLPTDAEQLEEHGEEGMEYPEEDCAVKAVDVLQVLLVWRKTSLKAIEICLEMLGQGALQGKAAVYCISEVRRSVAVGETL 171          
The following BLAST results are available for this feature:
BLAST of NO15G02910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22312.17.100e-1836.00hypothetical protein Naga_101073g2, partial [Nanno... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL146nonsL146Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001298NSK001298Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02910.1NO15G02910.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|444768gene_4852Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_101073g2gene8128Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02910.1NO15G02910.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02910 ID=NO15G02910|Name=NO15G02910|organism=Nannochloropsis oceanica|type=gene|length=3626bp
CAGGGTCTGCTTACCGTGGAGACGGCGTGCCCATCGATTGGATGCTTCGT
TAGCCCCCAACCCGGTATCATCGTCAACGACCAGCAGGAGCAGCAACGAA
CAAAGCACGAGCCCCACCGAAACCCTTGCATACGACCATGCCCACCCCGG
CTATTGAGGGCCTCCTGGTCTCTCTTGCCCAGTGCCTGTATGATTATCCT
TCGGCTCACTACCACCACTGCCAGCACGAGGAAGCGGAGAGTAGTGAAAA
GTGGGGAAGCGGTGCAGTCCGACGGCACTTGCGGGAACTCGACGAGGAGG
CGGTCGATGCGCTTGTCCACGCATTGGAAGAGCACATTGTGATGGAAGCA
CTACCACGGCAGCAATATCAGTACCAGCATCAGCTGGGAGAGCGACCACC
ACCAGACCAGCAGCACCACCACCATCACCAAAGCCAATACGAAACCCACC
AGCAGCAGCAAGGCGAGGATGAAGGGGAGCTCCTGAAAGCAAGCGATATC
CTCCAAGTTCTTCTATCGTGGCGTCGAACCGGCGTGAAGGCTATCAAAAG
CTGCATACAGATGATCAGGGATGGTCAATTAAAAGGGAGGCAGGCCGTGT
GGTGTGTGTCGGAGATCAGGCAGGCATTGACGACGGGGGAAGGGCTGGCG
GTCTTGACGCATTACTCTCATGAAGAAGAAGACGAGGAGGGGTTGGGCGA
GAAACAAGAGAACGAGGAAGAAGGAGAAGAAGTATGGGAAAATGGAAATG
GCAAGGGAAAAGCGAAGAAGAGGAGAACTCCTACCAGCGGAGGGGGCAGC
AACAGCACTAGCAGCACCAGCAGGAAGAGGAGGCGTCCCTCCACCAATAA
TAATAGCTATCTGTCATCCCCCTTATACATTCATCGAAGACCAAGCGATA
TCCAGCTTCGAGCATACGAAGAGTCATTGAGAGAGTTAAGAGGTCTCCTC
TTCTCTACCCTTGCCCTCCTCACTTCCCCCTCCTCATCCCCTTCCTCCTC
CACTTCCTCCTCCACTTCCACCTCACTCCTCATGACTGACTGGGATGCGG
TTCGTCTGCAGAATTTCCTTCTTGTCCTCGACATCTTTTGGCCCCTCCTC
GTCCTCGCTCAACGCCTCGAAGATGAACTCAGCCTGTGGACCGCCAAGAA
GCAGCAGCAGCGACAGCAGCAGCAGCAACGACAGCGGCAGCAACATGGAC
AAAGACCTCCGCAGCAGCAGGAGGGAGCGGAGGAAGGGCAGAAGGAGGAA
GCGTTCGTGTGGGTTCGGCCTGCACGGAGTACAGGGGAGGAGGTGGGGTT
GGCGGTGCTGGGGGCAGCTTGGCCCCTCCCCCTCACCCTCCCTCTGTTCA
ACCTGTGCAGGGATATGCATGAATTTTTCGTCGAGGAGGAGGAGGAAGAG
GAGGAGAAGGAGGGAAGGAGTGATGGAAAAGTAGCATCGTGCTCGTGGGG
TAGAGTACGGGCGAAAATTAGAGTGAATACACGAGGGGAGGAGGAAGGGG
AGGGAGGGGAGGAAGGGAGGGAGGGAGGGAAGAAGGGGCGGAAGCAACGG
CAGGAGCTATTGAGTAATGACGGACCCGGCTTAATGCGCCAGTGCTTGGT
ATTGGCGGAAGCGTACGAGAAGGAGGATGGGAGGGAGGGCGGAGGGAAAG
GCAACCCTTGGATTGGGCTGTTCAGGGAGCTGTACCACCATGTGCCGTGT
GAGGCGATAGCGACCACAGAGCTGGTCGTCGAGCAGTGCATTAAGCAGGC
CTTGCCGTGCGTGGATTTGTTGGTGAGGGATCTGGAAGGACGACTTCTTG
CCTCGGTCCCTTTCTCCCACTTATCCTCCCCCTCAACCTCCTCCTCCTCC
TCCTCGAGGAAGGCTGCACCAGCCCTAGGGTGGCAGGACCTCGCTCTCCT
CCTCCTCCTCCAAAGGTCAGTCTCGGGCTGGGCGTCGCTGTCGTCCGTGC
TGCTTGGAATGGGTAGAGGAGGTGGAAGAGGAGGAGGACGAGGAGGAAGC
GGAGGAGGAGGAGGAGGAGTTCTCTGCTCACAGCAGCGCATGAATCACGT
TCTCCTCCGACTCCTAACTCATCTCAGTGAAGACGCCCGCATTCTCCTCC
CCCCTCCTCCTTCCTCCTCCTCCTCCTCCTCCTCCTCTGTCTGGGATCCA
CCCATCAAAAAGAACCTTTCCTCTCTCCTCTCCTCCTCCTCGCCCTCCTC
CCCCTCCTCCTCCTTCCTCCGTCGCGCCTCCCTCCTCCTCACCCATGTCG
TCACTCATAACTACTCCCCTCGACGCTTCCTCGGCCGCCTTCCCCTTCAA
CGTTCTTCCCAGCTCTTCGCCCTTTTCTTTGCCTGGCTCCAAGAGGTCCA
TCCTACCTCTGCCTCCCTCCCTCCCTCCCTCCTTCGTGATCTGGCAATAG
AGGGCATAAGCGTAGTGTATGGAGAGGTGCCGGAAGGACAGGCACGCATT
CTCTCCTCCCTCCTTGGGGCCATCGTCGAACACGCCCAAAACGCCCGCCC
TCCGCAACAGCACGAGCAGCTCCAACCGCATCAGCAGCACCCGCAGCAGC
ATCTGTCGCCGTTGCGGGCCCGGCCTTCTTCTTGGTCTTCATCCAAGCCC
CTTTCCCTCCTCGTCGCCGCGCTGCATACGCTCACCACCTCCCATCCCAC
CACCCTCCGTCCTCACACGCAGCCCTTTCAACAACTCCTCTCCCAGCTCC
CTTCCCTCCCTCCCTCCCTCACCTCCTCCCTCCTCCACGCCACCCTCCCG
CTCGCCTGTGCCTGCCCCTCCTTCCTCGATGCCCTCCTGGCCGCCATCCG
GAAAAGCATCGTCCAAAATGATGTGTCTGGACGACTATTCGGCATGAGTG
CCCTAACCTCCCTCCTCGGGCAATACCGCGGCCTGCTGGCCCTCCCTGAG
CGGTGTGAGGAAGTGGCTTCCATGTTCGATCGGCTCCTCGCCCTCGCCCT
CCCCCTCGCCCTCAAGAGTAAGCTGTACCGGTCCATCACCGACGCGATGA
GGGAGGAAGGGAGGGGGGAAGGGAGGGAGGGAGGGTTGATGAATCTGTCG
TTCATGCTGTCCGGCGCTCCTCGAGTGCCACGGCGGAAGACAAGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGTGCGGCAGTGCCGTTGT
TGAAGGAAAGTATGAGAAGGCGGTTGGGCCGGTTCTTAGATTGGAGGAGA
GGAGGGCAGCTGTCTCCCCTGAGTTTGTATGACGTGTACGGAGGGGGAGG
GAGGGAGGGAGGGAGGGGTGGAAGGAGGAAGGTGGCGTTGAGGGACGACC
TGCCCGAGCTCTTGCTGTGCGTGATGGCCCTGGAGAGTAAGGAAGGGGGA
AGGGAGGGGGAGGGAAGGAAGGATGCGGCATACGCCTTTCCCTTGCAGGT
GGCACGCTTAGTGTTGTTGCCTCCCTGTGGGGGCAGCGGCAGCAGCAGCA
GCAGCAGCGATGGTTCCCGTTCTTCCTCCCTCCCTCCCTCGCTTTCCGAT
TTCCTCCACCGCCAGGGGGGAGGGAGGGAGGCAGGGAGGGGATCGGTCCG
CTCTCCTCCCACGTACTCGAGGCGTTGATTACCTTTGTCAGGGAAGGCTT
TCCAATGGAGGGGGAGGAAGGGAGGG
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protein sequence of NO15G02910.1

>NO15G02910.1-protein ID=NO15G02910.1-protein|Name=NO15G02910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1147bp
MPTPAIEGLLVSLAQCLYDYPSAHYHHCQHEEAESSEKWGSGAVRRHLRE
LDEEAVDALVHALEEHIVMEALPRQQYQYQHQLGERPPPDQQHHHHHQSQ
YETHQQQQGEDEGELLKASDILQVLLSWRRTGVKAIKSCIQMIRDGQLKG
RQAVWCVSEIRQALTTGEGLAVLTHYSHEEEDEEGLGEKQENEEEGEEVW
ENGNGKGKAKKRRTPTSGGGSNSTSSTSRKRRRPSTNNNSYLSSPLYIHR
RPSDIQLRAYEESLRELRGLLFSTLALLTSPSSSPSSSTSSSTSTSLLMT
DWDAVRLQNFLLVLDIFWPLLVLAQRLEDELSLWTAKKQQQRQQQQQRQR
QQHGQRPPQQQEGAEEGQKEEAFVWVRPARSTGEEVGLAVLGAAWPLPLT
LPLFNLCRDMHEFFVEEEEEEEEKEGRSDGKVASCSWGRVRAKIRVNTRG
EEEGEGGEEGREGGKKGRKQRQELLSNDGPGLMRQCLVLAEAYEKEDGRE
GGGKGNPWIGLFRELYHHVPCEAIATTELVVEQCIKQALPCVDLLVRDLE
GRLLASVPFSHLSSPSTSSSSSSRKAAPALGWQDLALLLLLQRSVSGWAS
LSSVLLGMGRGGGRGGGRGGSGGGGGGVLCSQQRMNHVLLRLLTHLSEDA
RILLPPPPSSSSSSSSSVWDPPIKKNLSSLLSSSSPSSPSSSFLRRASLL
LTHVVTHNYSPRRFLGRLPLQRSSQLFALFFAWLQEVHPTSASLPPSLLR
DLAIEGISVVYGEVPEGQARILSSLLGAIVEHAQNARPPQQHEQLQPHQQ
HPQQHLSPLRARPSSWSSSKPLSLLVAALHTLTTSHPTTLRPHTQPFQQL
LSQLPSLPPSLTSSLLHATLPLACACPSFLDALLAAIRKSIVQNDVSGRL
FGMSALTSLLGQYRGLLALPERCEEVASMFDRLLALALPLALKSKLYRSI
TDAMREEGRGEGREGGLMNLSFMLSGAPRVPRRKTRREGGREGGREGGSA
AVPLLKESMRRRLGRFLDWRRGGQLSPLSLYDVYGGGGREGGRGGRRKVA
LRDDLPELLLCVMALESKEGGREGEGRKDAAYAFPLQVARLVLLPPCGGS
GSSSSSSDGSRSSSLPPSLSDFLHRQGGGREAGRGSVRSPPTYSRR*
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Synonyms
Publications