NO15G02800, NO15G02800 (gene) Nannochloropsis oceanica

Overview
NameNO15G02800
Unique NameNO15G02800
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1555
Alignment locationchr15:766921..768475 -

Link to JBrowse

Properties
Property NameValue
DescriptionCarbonyl reductase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:766921..768475 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR002347Glc/ribitol_DH
Homology
BLAST of NO15G02800 vs. NCBI_GenBank
Match: EWM22355.1 (carbonyl reductase [Nannochloropsis gaditana])

HSP 1 Score: 443.0 bits (1138), Expect = 9.900e-121
Identity = 222/319 (69.59%), Postives = 253/319 (79.31%), Query Frame = 0
Query:   74 ILRNVFATVTSCLLLGIPAGAFTTRLAMSAPSGPIVVVTGSNKGIGLEILKKLAPTSSVMILAARDPGRGQVAAQKLREEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSDPTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRLSILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYGMSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDMSSHSGPRSAEHGARTPAWLASKGVEDGAKAGGFFYDEKEINW 393
            I R+  A   SC LL   A AF + LAMSA  GPI +VTGSNKGIGLEILKKLAPTSSV ILAAR+P  G+ AAQ+LR+ GL+NV +RPLD+SS+ESI+ F   ++KD+G  D+LVNNAGIAFK  DPTPFR+QA PT KTNFWGT+ELIDAMTPLLRK+    P IVNVASQSGRLSIL+TD+ KQ E SSP LTR+RL  LV +FE DV+ G H E GWPNTCYGMSKLALI+FG+VFA  E EG      G E EG+ +IWLASCCPGWCDTDMSSHSGPR+AEHGARTPAWLA +G + GA AGGFFYDEKEI W
Sbjct:   22 IFRHFVAATASCFLLSHSARAFGSHLAMSASPGPITIVTGSNKGIGLEILKKLAPTSSVAILAARNPSLGEQAAQELRDHGLENVKYRPLDVSSAESIEHFVKEIQKDYGRADILVNNAGIAFKGRDPTPFRDQAAPTFKTNFWGTVELIDAMTPLLRKS-TGCPCIVNVASQSGRLSILDTDRGKQAEISSPILTRDRLFELVRQFEHDVRTGTHAENGWPNTCYGMSKLALIAFGRVFARNEMEG------GTEKEGKTSIWLASCCPGWCDTDMSSHSGPRTAEHGARTPAWLAMEGRQQGATAGGFFYDEKEIQW 333          
BLAST of NO15G02800 vs. NCBI_GenBank
Match: CBJ33454.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 271.2 bits (692), Expect = 5.200e-69
Identity = 146/308 (47.40%), Postives = 200/308 (64.94%), Query Frame = 0
Query:   87 LLGIPAGAFTTRLAMSAPSGPIVVVTGSNKGIGLEILKKLA-PTSSVMILAARDPGRGQVAAQKLREEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSDPTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRLSILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYGMSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDMSSHSGPRSAEHGARTPAWLAS-KGVEDGAKAGGFFYDEKEINW 393
            LL + A    +     A    I VVTG+NKGIGL I KKLA     + +L +R P  GQ A   L+EEGL++VV++ LDI    S+++FA+ +E++FG  DVLVNNAGIAFK SDPTPF++QA PTLKTNF+ T    + M PL+RK+  +  R+VNVAS +G LSIL + ++++  F++P LT+ERLSA++++F  DVK G+H+  GWPNTCYGMSKL +I++ KV A  E+E  +             + + +CCPG+CDTDM+SH G  + E GARTP  L   K V++G   G FF  E    W
Sbjct:   12 LLLLTAAVLLSYAGKPASGMRISVVTGANKGIGLAIAKKLAGAPGHLCVLTSRTPALGQKAVDDLKEEGLESVVYKQLDIGDPASVERFASELEQEFGRCDVLVNNAGIAFKGSDPTPFKDQAEPTLKTNFFDTAAFTEKMLPLVRKS--DAGRVVNVASMAGHLSILGS-QDRRNAFTNPALTKERLSAMMAQFVGDVKAGRHQGGGWPNTCYGMSKLGVIAYTKVAARVEREAGS------------TVTINACCPGYCDTDMTSHRGTLTPEEGARTPFMLTQMKSVDEGGLTGEFFRKEALAEW 304          
BLAST of NO15G02800 vs. NCBI_GenBank
Match: EJK76894.1 (hypothetical protein THAOC_01319 [Thalassiosira oceanica])

HSP 1 Score: 213.0 bits (541), Expect = 1.700e-51
Identity = 133/296 (44.93%), Postives = 168/296 (56.76%), Query Frame = 0
Query:  100 AMSAPSGPIVVVTGSNKGIGLEILKKLAPTS--SVMILAARDPGRGQVAAQKLRE----EGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSDPTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRLSILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYGMSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDMSSHSGPRSAEHGART---PAWLASKGVEDGAKAGGFFYD 387
            A+S     + VVTG+NKGIG  I   LA +   S ++L  RD  RG+ A + +           V  R L I S ES   F AGM + +G  DVLVNNAGIAFK SDPTPF  Q  PTL  NFWGT++  + M PLLRK      RIVNVAS +G L  L + +  Q +FSSP LT++ L +LV +F++DV  G+H   GW N+ YGMSKLALI+  K++A EE           EG+    I +  CCPG+C TDMSSH G R    GAR    PA + S      A +G +F D
Sbjct:   19 ALSETMSRVAVVTGANKGIGFHIAAGLASSGLFSDVVLGCRDEARGRQAVETIASLPGTPRSCRVSCRQLAIGSRESHDAFIAGMTERYGKVDVLVNNAGIAFKGSDPTPFEGQCKPTLAVNFWGTVDFTEEMLPLLRKG--SDARIVNVASMAGHLGQLRS-RELQRKFSSPDLTKDELFSLVEEFQRDVLSGRHTGAGWGNSNYGMSKLALIAMTKIWAREE-----------EGD----ISVNCCCPGYCATDMSSHRGNRHPSEGARNALIPAMMES------APSGEYFAD 290          
BLAST of NO15G02800 vs. NCBI_GenBank
Match: XP_022787306.1 (carbonyl reductase [NADPH] 1-like [Stylophora pistillata] >PFX27596.1 Carbonyl reductase [NADPH] 1 [Stylophora pistillata])

HSP 1 Score: 213.0 bits (541), Expect = 1.700e-51
Identity = 124/289 (42.91%), Postives = 170/289 (58.82%), Query Frame = 0
Query:  105 SGPIVVVTGSNKGIGLEILKKLAPT-SSVMILAARDPGRGQVAAQKLREEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSDPTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRLSILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYGMSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDMSSHSGPRSAEHGARTPAWLASKGVEDGAKAGGFFYDEKEINW 393
            S  + VVTG+NKGIG  I+++L       +IL ARD  RG+ A QKL  EGL  V F  LDI S ESI++F   ++  +G  DVLVNNA IA+K +   PF EQ   TL+TNF GT+++  A+ PLLR       R+VNV+S++GRL+     K  QE+F+SP LT E L +L+ +F +DVK+G HK++GW N+ YG SK+ L +  K+ A    E           + R+ I L +CCPGW  TDM+    P+S + GA TP +LA      G   G FF ++    W
Sbjct:    3 SSKVAVVTGANKGIGYAIVQRLCKEFPGTVILTARDEQRGKEAVQKLSSEGL-TVSFHQLDIISLESIEKFRKFVQDQYGGIDVLVNNAAIAYKMASTAPFTEQVEVTLRTNFRGTLDVCRALFPLLR----PHARVVNVSSRAGRLA--QVSKEIQEKFTSPTLTEEGLISLLDQFAQDVKDGVHKKKGWSNSAYGTSKIGLTALSKIQARALTE-----------DPREDILLNACCPGWVRTDMAGPKAPKSPDEGAETPVYLALLPQNAGKPHGEFFAEKAVHEW 273          
BLAST of NO15G02800 vs. NCBI_GenBank
Match: XP_001641607.1 (predicted protein [Nematostella vectensis] >EDO49544.1 predicted protein [Nematostella vectensis])

HSP 1 Score: 211.1 bits (536), Expect = 6.300e-51
Identity = 127/293 (43.34%), Postives = 172/293 (58.70%), Query Frame = 0
Query:  101 MSAPSGPIVVVTGSNKGIGLEILKKLAPT-SSVMILAARDPGRGQVAAQKLREEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSDPTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRLSILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYGMSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDMSSHSGPRSAEHGARTPAWLASKGVEDGAKAGGFFYDEKEINW 393
            M+A    + VVTGSNKGIG  I++ L    S  +IL AR+   G+ A  KL+EEGL N VF  LDI+S ESI +    +   +   D+L+NNAGIA+K +   PF EQA  T +TNF GT+ + D + PLLR       R+VNVAS +G L I+ ++  K  +F+SP LT+  L  LV +F  DVK G HKE+GW N+ YGMSK+A+I+  KV A +            E + R+ I +  CCPG+ DTDMSSH G  + + GA TP + A    E    +G FF  +K + W
Sbjct:    1 MAASPSRVAVVTGSNKGIGFAIVRGLCKQFSGTVILTARNENLGKEAVDKLKEEGL-NPVFHQLDITSQESINKLRDYLSSTYKGLDLLINNAGIAYKGASIAPFSEQAEVTARTNFTGTLNICDTLFPLLR----PHARVVNVASLAGLLKIIPSEAIK-AKFTSPSLTQSGLVGLVEEFISDVKAGVHKEKGWSNSAYGMSKVAVIALTKVQARQM-----------EKDPRQDILVNCCCPGYVDTDMSSHKGHLTIDQGAETPIYCALL-PEGCGHSGEFFSQKKVVGW 275          
BLAST of NO15G02800 vs. NCBI_GenBank
Match: XP_020017525.1 (carbonyl reductase [NADPH] 1 [Castor canadensis])

HSP 1 Score: 204.9 bits (520), Expect = 4.500e-49
Identity = 116/286 (40.56%), Postives = 167/286 (58.39%), Query Frame = 0
Query:  108 IVVVTGSNKGIGLEILKKLA-PTSSVMILAARDPGRGQVAAQKLREEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSDPTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRLSILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYGMSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDMSSHSGPRSAEHGARTPAWLASKGVEDGAKAGGFFYDEKEINW 393
            + +VTGSNKGIG  I++ L    S  +IL ARD  RG+ A Q+L+ EGL +  F  LDI   +SI+     + K++G  DVLVNNAGIAFK +DPTPF  QA  T+KTNF+GT  +   + PL++       R+VNV+S     ++ N     Q++F S  +T E L  L++KF +D K G H++EGWP++ YG++K+ +    ++ A         R +  +  G K I+L +CCPGW  TDM+  S P+S E GA TP +LA    +     G F Y++K   W
Sbjct:    7 VALVTGSNKGIGFAIVRDLCRQFSGDVILTARDEARGRTAVQQLQAEGL-SPRFHQLDIDDLQSIRVLRDFLRKEYGGLDVLVNNAGIAFKMADPTPFHIQAEVTMKTNFFGTRNICTELLPLIK----PQGRVVNVSSTLSLSALKNCSPELQKKFRSETITEEELVGLMNKFVEDTKNGVHEKEGWPSSAYGVTKIGVTVLSRIHA---------RNLNEQRRGEK-IFLNACCPGWVRTDMAGPSAPKSLEEGAETPVYLALLPQDAEGPHGQFVYEKKVEQW 277          
BLAST of NO15G02800 vs. NCBI_GenBank
Match: NP_001302675.1 (carbonyl reductase [NADPH] 1 [Sus scrofa] >AKV89675.1 carbonyl reductase 3 [Sus scrofa])

HSP 1 Score: 204.5 bits (519), Expect = 5.900e-49
Identity = 118/286 (41.26%), Postives = 164/286 (57.34%), Query Frame = 0
Query:  108 IVVVTGSNKGIGLEILKKLAPT-SSVMILAARDPGRGQVAAQKLREEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSDPTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRLSILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYGMSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDMSSHSGPRSAEHGARTPAWLASKGVEDGAKAGGFFYDEKEINW 393
            + VVTG NKGIGL I++ L    S  ++L ARD  RGQ A Q+L+ EGL +  F  LDI    SIQ     + K++G  +VLVNNAGIAFK  DPTPF  QA  T+KTNF GT  +   + PL++       R+VNV+S     ++ N     Q++F S  +T E L  L++KF +D K G HK+EGWP+T YG++K+ +    +++A +  E +A         G K I L +CCPGW  TDM+    P+S E GA TP +LA    +     G F  ++K + W
Sbjct:    7 VAVVTGGNKGIGLAIVRDLCQQFSGDVMLTARDVARGQAAVQQLQAEGL-SPRFHQLDIDDLRSIQALRDFLLKEYGGLNVLVNNAGIAFKTVDPTPFHIQAEVTMKTNFLGTRNVCTELLPLIK----PQGRVVNVSSTESVRALNNCSPELQQKFKSETITEEELVGLMNKFVEDTKNGVHKKEGWPSTAYGVTKIGVTVLSRIYARKLSEQRA---------GDK-ILLNACCPGWVRTDMAGPKAPKSPEEGAETPVYLALLPSDAEGPHGQFVSEKKVVEW 277          
BLAST of NO15G02800 vs. NCBI_GenBank
Match: XP_001916308.1 (carbonyl reductase [NADPH] 1 [Equus caballus])

HSP 1 Score: 204.1 bits (518), Expect = 7.700e-49
Identity = 117/286 (40.91%), Postives = 165/286 (57.69%), Query Frame = 0
Query:  108 IVVVTGSNKGIGLEILKKLA-PTSSVMILAARDPGRGQVAAQKLREEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSDPTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRLSILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYGMSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDMSSHSGPRSAEHGARTPAWLASKGVEDGAKAGGFFYDEKEINW 393
            + +VTG+NKGIG  I + L    S  ++L ARD  RGQ A Q+L+ EGL +  F  LDI+  +SI+     ++K++G  DVLVNNAGIAFK  DPTPF  QA  T+KTNF+GT ++   + PL++       R+VNV+S     ++ N     QE+F S  +T E L  L++KF +D K G H++EGWPNT YG++K+ +    ++  H  K  + +RG          I L +CCPGW  TDMS    P+S E GA TP +LA    +     G F  ++K   W
Sbjct:    7 VALVTGANKGIGFAIARDLCRQFSGDVVLTARDAARGQAAVQQLQAEGL-SPRFHQLDINDLQSIRALRDFLKKEYGGLDVLVNNAGIAFKTVDPTPFPIQAEVTMKTNFFGTRDVCTELLPLIK----PHGRVVNVSSTVSLSALHNCSPKLQEKFRSETITEEELVGLMNKFVEDTKNGVHQKEGWPNTAYGVTKIGVTVLSRI--HARKLSEQRRG--------DKILLNACCPGWVRTDMSGPRAPKSPEEGAETPVYLALLPSDAEGPHGEFVVEKKVKQW 277          
BLAST of NO15G02800 vs. NCBI_GenBank
Match: XP_005303378.1 (carbonyl reductase [NADPH] 1 [Chrysemys picta bellii])

HSP 1 Score: 203.8 bits (517), Expect = 1.000e-48
Identity = 116/290 (40.00%), Postives = 169/290 (58.28%), Query Frame = 0
Query:  105 SGPIVVVTGSNKGIGLEILKKLAPT-SSVMILAARDPGRGQVAAQKLREEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSDPTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRLSILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYGMSKLALISFGKVFAHE-EKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDMSSHSGPRSAEHGARTPAWLASKGVEDGAKAGGFFYDEKEINW 393
            S P+ VVTG NKGIG  I++ L    +  + L ARDPGRGQVA  KL++EGL N +F  LDI   +SI+     +++ +G  +VLVNNAGIAFK +D TPF  QA  T++TNF+ T ++   + PL++       R+VNV+S     ++    ++ Q++F S  +T E L  L++KF +D K G H++EGWPNT YG++K+ +    ++ A    KE KA R           I L +CCPGW  TDM+  +  +SA+ GA TP +LA    +     G F  ++K   W
Sbjct:    3 STPVAVVTGGNKGIGFAIVRALCKQFTGDVYLTARDPGRGQVAVTKLQQEGL-NPLFHQLDIEDLQSIRTLQDFLKEKYGGLNVLVNNAGIAFKVADTTPFAIQAEVTMRTNFFATRDVCTELLPLIK----PHGRVVNVSSMGSVSALARCSRDLQQKFRSDTITEEELVKLMTKFVEDTKNGVHEKEGWPNTAYGVTKIGVTVLSRIQARMLNKERKADR-----------ILLNACCPGWVRTDMAGPNATKSADEGAETPVYLALLAPDADGPHGQFVSEKKVQKW 276          
BLAST of NO15G02800 vs. NCBI_GenBank
Match: XP_004615386.1 (PREDICTED: carbonyl reductase [NADPH] 1 [Sorex araneus])

HSP 1 Score: 203.0 bits (515), Expect = 1.700e-48
Identity = 114/286 (39.86%), Postives = 168/286 (58.74%), Query Frame = 0
Query:  108 IVVVTGSNKGIGLEILKKLA-PTSSVMILAARDPGRGQVAAQKLREEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSDPTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRLSILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYGMSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDMSSHSGPRSAEHGARTPAWLASKGVEDGAKAGGFFYDEKEINW 393
            + +VTG+NKGIG  I+++L    S  ++L ARD  RGQ A Q+L+ EGL +  F  LDI+  +SI+     + K++G  DVLVNNAGIAFK +D TPF  QA  T+KTNF+GT ++   + PL++       R+VNV+S     ++ +     Q++F S  +T E L  L++KF +D K+G H++EGWPNT YG++K+ +    ++ A E KE   ++G G        I L +CCPGW  TDM+     +S E GA TP +LA    +     G F  ++K   W
Sbjct:    7 VALVTGANKGIGFAIVRELCRHFSGDVVLTARDTARGQAAVQQLQAEGL-SPRFHQLDINDPQSIRALRDFLRKEYGGLDVLVNNAGIAFKTNDTTPFHIQAEVTMKTNFYGTKDVCAELLPLMK----PQGRVVNVSSMVSLRALKSCSPELQQKFRSDTITEEELVGLMNKFVEDTKKGTHQQEGWPNTAYGVTKIGVTVLSRIQARELKE--QRKGAG--------ILLNACCPGWVRTDMAGPKATKSPEEGAETPVYLALLPPDAEGPHGQFVMEKKVEQW 277          
The following BLAST results are available for this feature:
BLAST of NO15G02800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22355.19.900e-12169.59carbonyl reductase [Nannochloropsis gaditana][more]
CBJ33454.15.200e-6947.40conserved unknown protein [Ectocarpus siliculosus][more]
EJK76894.11.700e-5144.93hypothetical protein THAOC_01319 [Thalassiosira oc... [more]
XP_022787306.11.700e-5142.91carbonyl reductase [NADPH] 1-like [Stylophora pist... [more]
XP_001641607.16.300e-5143.34predicted protein [Nematostella vectensis] >EDO495... [more]
XP_020017525.14.500e-4940.56carbonyl reductase [NADPH] 1 [Castor canadensis][more]
NP_001302675.15.900e-4941.26carbonyl reductase [NADPH] 1 [Sus scrofa] >AKV8967... [more]
XP_001916308.17.700e-4940.91carbonyl reductase [NADPH] 1 [Equus caballus][more]
XP_005303378.11.000e-4840.00carbonyl reductase [NADPH] 1 [Chrysemys picta bell... [more]
XP_004615386.11.700e-4839.86PREDICTED: carbonyl reductase [NADPH] 1 [Sorex ara... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL141nonsL141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR064ngnoR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001352NSK001352Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02800.1NO15G02800.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|623172gene_4841Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100208g6gene8087Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02800.1NO15G02800.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02800 ID=NO15G02800|Name=NO15G02800|organism=Nannochloropsis oceanica|type=gene|length=1555bp
ATTGAGTTGAGTTTTTATGGCTTTCGTGTATCAACCTCCTGTCGAAAAGC
AAACGCCATCGACCTTGGGTCCCACGACCCTTATGCCTGCGCCAGCGCAA
TGCATCAGAACAAGGCCAGACCACGGACAAGATATTCAACACATCTATAT
CCTCATCCCAGTAATGCTGGTCCCCCTTTCCCGCCTTGCTTCATCTCAAG
CGTCCTCTTCCTCGGCCAGCTTGAGCAGGCAAGGTATTTTGCGCAACGTC
TTCGCGACCGTCACCTCTTGCCTCCTTCTTGGTATTCCTGCCGGCGCCTT
CACCACCCGCTTGGCAATGTCTGCGCCATCGGGCCCCATTGTAGTCGTCA
CGGGCAGTAACAAGGGTATCGGCTTGGAAATTCTGAAGAAACTCGCACCA
ACTTCGTCCGTCATGATTCTTGCAGCTCGAGACCCCGGCCGCGGGCAGGT
GGCTGCACAAAAGCTGCGTGAGGAGGGGCTGGATAACGTGGTGTTTCGTC
CTTTGGACATTTCTTCTTCCGAGTCCATTCAGCAGTTTGCCGCCGGGATG
GAGAAGGACTTTGGGCTCACGGATGTACTTGTCAATAACGCAGgtacgtg
tcacagtgatgagagtgatgtattgggtgggcagagggcgtgtttgaggt
gctttgcgcagcgacttctattgtaggtacacattatcgcccatgtcgcg
cctccctgttcactctatccctccttttcctccagGTATTGCATTCAAAA
ACAGCGACCCCACCCCCTTCCGGGAACAAGCCACTCCCACCCTCAAGACC
AACTTCTGGGGCACAATCGAACTGATCGACGCCATGACACCGCTATTGCG
CAAGGCGAAAATTGAAACTCCTCGCATTGTGAATGTGGCCAGCCAAAGTG
GCCGCTTGAGCATCTTAAATACTGATAAGAACAAGCAGGAGGAGTTTTCC
TCGCCGGGCTTGACGAGAGAGCGATTGTCTGCGTTGGTGAGTAAGTTTGA
GAAAGATGTGAAAGAAGGGAAGCACAAGGAGGAGGGATGGCCCAATACCT
GTTATGGCATGAGTAAATTGGCCTTGATCTCGTTCGGAAAGGTATTTGCA
CACGAAGAGAAAGAAGGGAAGGCAAAGCGAGGGATCGGGGGAGAGGGCGA
GGGAAGGAAGGCAATTTGGTTGGCTTCGTGCTGCCCGGGGTGGTGTGATA
CGGATATGAGCAGCCATAGTGGCCCGAGGAGTGCGGAACACGGCGCACGA
ACGCCAGCTTGGCTAGCATCGAAGGGAGTAGAGGATGGAGCGAAGGCGGG
AGGATTTTTTTACGACGAGAAGGAGATAAATTGGTAGAGGGATAAGGGAA
GAAGATTCAGAGACAAGGTAAAGGTTGGAAGGCAAGACATATATCGGTAG
AAGGAAAAGGGGGAATGGTTAAGGGAACAGATGTAGGCAAGAGACAGAGC
GATGCAAACGAGAGTGGAGAAACAAAGAGGCATAAATCAAATACAAGAAA
TGGAGAGAGATTGTGAAAGTCTGCCTGCCTGCAGCTCTACCTGGATCGCA
ACGCG
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protein sequence of NO15G02800.1

>NO15G02800.1-protein ID=NO15G02800.1-protein|Name=NO15G02800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=393bp
MAFVYQPPVEKQTPSTLGPTTLMPAPAQCIRTRPDHGQDIQHIYILIPVM
LVPLSRLASSQASSSSASLSRQGILRNVFATVTSCLLLGIPAGAFTTRLA
MSAPSGPIVVVTGSNKGIGLEILKKLAPTSSVMILAARDPGRGQVAAQKL
REEGLDNVVFRPLDISSSESIQQFAAGMEKDFGLTDVLVNNAGIAFKNSD
PTPFREQATPTLKTNFWGTIELIDAMTPLLRKAKIETPRIVNVASQSGRL
SILNTDKNKQEEFSSPGLTRERLSALVSKFEKDVKEGKHKEEGWPNTCYG
MSKLALISFGKVFAHEEKEGKAKRGIGGEGEGRKAIWLASCCPGWCDTDM
SSHSGPRSAEHGARTPAWLASKGVEDGAKAGGFFYDEKEINW*
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Synonyms
Publications