NO15G02730, NO15G02730 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02730 vs. NCBI_GenBank
Match: EWM22343.1 (nadh dehydrogenase ubiquinone 1 alpha subcomplex subunit 12 [Nannochloropsis gaditana]) HSP 1 Score: 369.4 bits (947), Expect = 7.800e-99 Identity = 172/200 (86.00%), Postives = 181/200 (90.50%), Query Frame = 0 Query: 19 MASVIQKYIKAYRLYGWRETLSKMYSMGEVKFGELKGEDVNGNKYFENLEYPFGQHRWVEYKDIHNYEPSSIAPEWHGWIHHMTDEVPVPGKAGVTESGMKIAEGQHTPYQVAAGKTEYQMEEQLNWTAHRSRGYGVGSLKQKSGEPDRFWVQPGHALAEKGMSKAKGGRFEGLKGYESWKPSDPEGKDTKQPIRSLDEN 219 MASV+QKY+KA R+YGWRETL KMYSMGEVKFG+LKG DVNGNKYFEN+EYPFGQHRWVEYKDIHNYEPSSI PEWHGWIHHMTDEVP GKAGVTE GMKIAEGQHTPYQVAAG T+YQME QLNWTAHRSRGYGVGSL QK+GEPD+FWVQPGH LA K K KGGRFEGLKGYE+W PSDPEGK T QPIRSLDEN Sbjct: 1 MASVVQKYMKALRVYGWRETLYKMYSMGEVKFGDLKGVDVNGNKYFENVEYPFGQHRWVEYKDIHNYEPSSIPPEWHGWIHHMTDEVPA-GKAGVTEPGMKIAEGQHTPYQVAAGLTDYQMEGQLNWTAHRSRGYGVGSLHQKAGEPDKFWVQPGHPLAAKKQEKGKGGRFEGLKGYEAWNPSDPEGKKTAQPIRSLDEN 199
BLAST of NO15G02730 vs. NCBI_GenBank
Match: CBJ29333.1 (NADH dehydrogenase (ubiquinone) [Ectocarpus siliculosus]) HSP 1 Score: 164.9 bits (416), Expect = 2.900e-37 Identity = 85/201 (42.29%), Postives = 118/201 (58.71%), Query Frame = 0 Query: 19 MASVIQKYIKAYRLYGWRETLSKMYSMGEVKFGELKGEDVNGNKYFENLEYPFGQHRWVEYKDIHNYEPSSIAPEWHGWIHHMTDEVPVPGKAGVTESGMKIAEGQHTPYQ--VAAGKTEYQMEEQLNWTAHRSRGYGVGSLKQKSGEPDRFWVQPGHALAEKGMSKAKGGRFEGLKGYESWKPSDPEGKDTKQPIRSLDE 218 + SV+ KY++AYR +G R L+KMY++G++KF +GQHRWVEY DIHNY+ SS+ WH W+HHM+D P ++IA GQHTP+ VA G+ + +N + R RG G+G++ Q+ GEPD ++ QPGH + +S KGGRF K E+W P DP+G +TKQPIR L E Sbjct: 2 VVSVVAKYMQAYRQFGLRAALTKMYTVGDIKFXXXXXXXXXXXXXXXXXXXXYGQHRWVEYADIHNYDSSSVTASWHPWLHHMSDHTPSAAAELPEMKPIEIAVGQHTPHNDFVAPGRV-----DDVNRSTWRPRGAGMGNIWQEPGEPDMYYKQPGH--PQHALSD-KGGRFSKQKSMETWDPKDPKGLNTKQPIRDLTE 194
BLAST of NO15G02730 vs. NCBI_GenBank
Match: GAY05320.1 (NADH ubiquinone oxidoreductase subunit, putative [Pythium insidiosum]) HSP 1 Score: 133.7 bits (335), Expect = 7.200e-28 Identity = 67/165 (40.61%), Postives = 103/165 (62.42%), Query Frame = 0 Query: 18 TMASVIQKYIKAYRLYGWRETLSKMYSMGEVKFGELKGEDVNGNKYFENLEYPFGQHRWVEYK--DIHNYEPSSIAPEWHGWIHHMTDEVP-VPGKAGVTESGMKIAEGQHTPYQVAAGKTEYQMEEQLNWTAHRSRGYGVGSLKQKSGEPDRFWVQPGHALAEK 180 ++ V +KY++AY+ YGW+ +L K+Y+ G++KFG+L GED G+KY+E+ GQ R+ EYK ++E S I P+WH W+ H+TD P PG+ + + I+ H PY G ++ ++N T RSRGYGVGS++ EPD+F++Q GHAL + Sbjct: 33 SLYGVYEKYMEAYKRYGWKLSLWKLYNPGDIKFGKLVGEDEFGHKYYEDPTDLHGQQRYTEYKVESFDDFEGSQIPPQWHMWMQHITDATPGSPGQDPANWAKVPISTVSHAPYANHVGPSK---PYKMNMTLARSRGYGVGSVQTSPDEPDQFYIQRGHALRRR 194
BLAST of NO15G02730 vs. NCBI_GenBank
Match: GAY02993.1 (glycylpeptide N-tetradecanoyltransferase 2 [Pythium insidiosum]) HSP 1 Score: 133.7 bits (335), Expect = 7.200e-28 Identity = 67/165 (40.61%), Postives = 103/165 (62.42%), Query Frame = 0 Query: 18 TMASVIQKYIKAYRLYGWRETLSKMYSMGEVKFGELKGEDVNGNKYFENLEYPFGQHRWVEYK--DIHNYEPSSIAPEWHGWIHHMTDEVP-VPGKAGVTESGMKIAEGQHTPYQVAAGKTEYQMEEQLNWTAHRSRGYGVGSLKQKSGEPDRFWVQPGHALAEK 180 ++ V +KY++AY+ YGW+ +L K+Y+ G++KFG+L GED G+KY+E+ GQ R+ EYK ++E S I P+WH W+ H+TD P PG+ + + I+ H PY G ++ ++N T RSRGYGVGS++ EPD+F++Q GHAL + Sbjct: 210 SLYGVYEKYMEAYKRYGWKLSLWKLYNPGDIKFGKLVGEDEFGHKYYEDPTDLHGQQRYTEYKVESFDDFEGSQIPPQWHMWMQHITDATPGSPGQDPANWAKVPISTVSHAPYANHVGPSK---PYKMNMTLARSRGYGVGSVQTSPDEPDQFYIQRGHALRRR 371
BLAST of NO15G02730 vs. NCBI_GenBank
Match: GAY03768.1 (NADH ubiquinone oxidoreductase subunit, putative [Pythium insidiosum]) HSP 1 Score: 131.7 bits (330), Expect = 2.700e-27 Identity = 66/165 (40.00%), Postives = 102/165 (61.82%), Query Frame = 0 Query: 18 TMASVIQKYIKAYRLYGWRETLSKMYSMGEVKFGELKGEDVNGNKYFENLEYPFGQHRWVEYK--DIHNYEPSSIAPEWHGWIHHMTDEVP-VPGKAGVTESGMKIAEGQHTPYQVAAGKTEYQMEEQLNWTAHRSRGYGVGSLKQKSGEPDRFWVQPGHALAEK 180 ++ V + Y++AY+ YGW+ +L K+Y+ G++KFG+L GED G+KY+E+ GQ R+ EYK ++E S I P+WH W+ H+TD P PG+ + + I+ H PY G ++ ++N T RSRGYGVGS++ EPD+F++Q GHAL + Sbjct: 33 SLYGVYENYMEAYKRYGWKLSLWKLYNPGDIKFGKLVGEDEFGHKYYEDPTDLHGQQRYTEYKVESFDDFEGSQIPPQWHMWMQHITDATPGSPGQDPANWAKVPISTVSHAPYANHVGPSK---PYKMNMTLARSRGYGVGSVQTSPDEPDQFYIQRGHALRRR 194
BLAST of NO15G02730 vs. NCBI_GenBank
Match: OWZ22906.1 (NADH ubiquinone oxidoreductase subunit [Phytophthora megakarya]) HSP 1 Score: 130.2 bits (326), Expect = 7.900e-27 Identity = 68/159 (42.77%), Postives = 101/159 (63.52%), Query Frame = 0 Query: 21 SVIQKYIKAYRLYGWRETLSKMYSMGEVKFGELKGEDVNGNKYFENLEYPFGQHRWVEYK--DIHNYEPSSIAPEWHGWIHHMTDEVPVPGKAGVTESGM-KIAEGQHT--PYQVAAGKTEYQMEEQLNWTAHRSRGYGVGSLKQKSGEPDRFWVQPGH 175 +V +KY++A + YGW+ TL K+Y+ G+VKFG L GED NG K++E+ +GQHRW EYK E + ++P+WH W+HH+TD +PG+ G + K+ +H+ PY G+ + N T +RSRGY VGSL K+ EPD++++QPGH Sbjct: 32 TVFEKYLEANKRYGWKGTLWKLYNPGDVKFGRLVGEDENGFKFYEDPTEVYGQHRWTEYKVDSWDEVEGTLLSPQWHLWMHHLTDS--LPGEGGQDPANWEKVNTVKHSDAPYANHLGE---NVPYYPNKTLYRSRGYNVGSLAIKADEPDQYYLQPGH 185
BLAST of NO15G02730 vs. NCBI_GenBank
Match: XP_024582902.1 (nadh dehydrogenase [Plasmopara halstedii] >CEG46533.1 nadh dehydrogenase [Plasmopara halstedii]) HSP 1 Score: 129.4 bits (324), Expect = 1.400e-26 Identity = 70/159 (44.03%), Postives = 94/159 (59.12%), Query Frame = 0 Query: 21 SVIQKYIKAYRLYGWRETLSKMYSMGEVKFGELKGEDVNGNKYFENLEYPFGQHRWVEYK--DIHNYEPSSIAPEWHGWIHHMTDEVPVPGKAGVTESG---MKIAEGQHTPYQVAAGKTEYQMEEQLNWTAHRSRGYGVGSLKQKSGEPDRFWVQPGH 175 +V +KY++A + YGW L K+Y+ G+VKFG L GED NG KY+E+ +GQHRW EYK E + I P WH W+HHMTD VPG+ G ++I + PY G + + N T +RSRGY VGSL K EPD++++QPGH Sbjct: 36 TVFEKYLEAKKRYGWEGVLWKLYNPGDVKFGRLVGEDENGFKYYEDPTELYGQHRWTEYKVNSWDEVEGTLIPPPWHLWMHHMTDS--VPGEGGQLPENWEKVEIVDKSDAPYINHLGPSGPYVP---NKTLYRSRGYNVGSLAIKPDEPDQYYLQPGH 189
BLAST of NO15G02730 vs. NCBI_GenBank
Match: XP_008900668.1 (hypothetical protein PPTG_08347 [Phytophthora parasitica INRA-310] >ETI53590.1 hypothetical protein F443_03502 [Phytophthora parasitica P1569] >ETK93454.1 hypothetical protein L915_03389 [Phytophthora parasitica] >ETL46870.1 hypothetical protein L916_03325 [Phytophthora parasitica] >ETM00003.1 hypothetical protein L917_03265 [Phytophthora parasitica] >ETM53165.1 hypothetical protein L914_03365 [Phytophthora parasitica] >ETN13585.1 hypothetical protein PPTG_08347 [Phytophthora parasitica INRA-310] >ETO82294.1 hypothetical protein F444_03556 [Phytophthora parasitica P1976] >ETP23389.1 hypothetical protein F441_03480 [Phytophthora parasitica CJ01A1] >ETP51387.1 hypothetical protein F442_03484 [Phytophthora parasitica P10297] >KUF76378.1 NADH dehydrogenase 1 alpha subcomplex subunit 12 [Phytophthora nicotianae] >KUF94133.1 Cyst germination specific acidic repeat protein [Phytophthora nicotianae] >KUF94362.1 NADH dehydrogenase 1 alpha subcomplex subunit 12 [Phytophthora nicotianae]) HSP 1 Score: 128.6 bits (322), Expect = 2.300e-26 Identity = 68/158 (43.04%), Postives = 97/158 (61.39%), Query Frame = 0 Query: 21 SVIQKYIKAYRLYGWRETLSKMYSMGEVKFGELKGEDVNGNKYFENLEYPFGQHRWVEYK--DIHNYEPSSIAPEWHGWIHHMTDEVPVPGKAGVTESGMKIAEGQHT--PYQVAAGKTEYQMEEQLNWTAHRSRGYGVGSLKQKSGEPDRFWVQPGH 175 +V +KY++A + YGW+ TL K+Y+ G+VKFG GED NG KY+E+ +GQHRW EYK E + I+P+WH W+HH+TD +P G + E+ K H+ P+ GK + N T +RSRGY VGSL + EPD++++QPGH Sbjct: 36 TVFEKYLEANKRYGWKGTLWKLYNPGDVKFGRFVGEDENGFKYYEDPTEVYGQHRWTEYKVDSWDEVEGTLISPQWHLWMHHVTDSIPGEG-GQLPENWEKRETVAHSDAPFVNHLGK---NVPYYPNKTLYRSRGYNVGSLAINADEPDQYYLQPGH 189
BLAST of NO15G02730 vs. NCBI_GenBank
Match: XP_009537254.1 (hypothetical protein PHYSODRAFT_356051 [Phytophthora sojae] >EGZ07688.1 hypothetical protein PHYSODRAFT_356051 [Phytophthora sojae]) HSP 1 Score: 125.6 bits (314), Expect = 2.000e-25 Identity = 78/227 (34.36%), Postives = 112/227 (49.34%), Query Frame = 0 Query: 1 MLTHATSEPTCTKPRHTTMAS---VIQKYIKAYRLYGWRETLSKMYSMGEVKFGELKGEDVNGNKYFENLEYPFGQHRWVEYK--DIHNYEPSSIAPEWHGWIHHMTDEVPVPG---------KAGVTESGMKIAE--GQHTPYQVAAGKTEYQMEEQLNWTAHRSRGYGVGSLKQKSGEPDRFWVQPGHALAEKGMSKAKGGRFEGLKGYESWKPSDPEGKDTKQP 212 ++ A + T K T S + +KY++A + YGW+ TL K+Y+ G+VKFG GED NG KY+E+ +GQHRW EYK E + I P+WH W+HH+TD +P G K V S G+H PY N T +RSRGY +GSL EPD++++QPGH S+ + + Y + + SD D+ +P Sbjct: 17 LVARAAAPSTLAKASQTQTRSFYTIFEKYMEANKRYGWKGTLWKLYNPGDVKFGRFVGEDENGFKYYEDPTELYGQHRWTEYKVDSWEEVEGTLIPPQWHLWMHHLTDSLPGQGGQDPANWEKKETVAHSDAPYVNHLGEHVPYYP-------------NKTLYRSRGYNIGSLATDVDEPDQYYLQPGHL----RRSRKRNPHYFADVDYNNPENSDESRADSLRP 226
BLAST of NO15G02730 vs. NCBI_GenBank
Match: XP_002895702.1 (NADH ubiquinone oxidoreductase subunit, putative [Phytophthora infestans T30-4] >XP_002904079.1 NADH ubiquinone oxidoreductase subunit, putative [Phytophthora infestans T30-4] >EEY54257.1 NADH ubiquinone oxidoreductase subunit, putative [Phytophthora infestans T30-4] >EEY55113.1 NADH ubiquinone oxidoreductase subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 122.1 bits (305), Expect = 2.200e-24 Identity = 74/195 (37.95%), Postives = 108/195 (55.38%), Query Frame = 0 Query: 21 SVIQKYIKAYRLYGWRETLSKMYSMGEVKFGELKGEDVNGNKYFENLEYPFGQHRWVEYK--DIHNYEPSSIAPEWHGWIHHMTDEVPVPGKAGVTESGMKIAEGQHT--PYQVAAGKTEYQMEEQLNWTAHRSRGYGVGSLKQKSGEPDRFWVQPGHALAEKGMSKAKGGRFEGLKGYESWKPSDPEGKDTKQP 212 +V +KY++A + YGW+ L K+Y+ G+VKFG GED NG KY+E+ +GQHRW EYK E + I P+WH W+HH+TD +P G + E+ K H+ PY G+ N T +RSRGY VGS+ + EPD++++QPGH + K K F + Y + + SD D+ +P Sbjct: 36 TVFEKYLEANKRYGWKGALWKLYNPGDVKFGRFVGEDENGFKYYEDPTEVYGQHRWTEYKVDSWDEVEGTLIGPQWHLWMHHVTDSLPGEG-GQLPENWEKRETVAHSDAPYVNHLGQDVLYYP---NKTLYRSRGYNVGSVAINADEPDQYYMQPGHL---RRTRKRKAHYFADV-DYNNPEYSDESRADSLRP 222 The following BLAST results are available for this feature:
BLAST of NO15G02730 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02730 ID=NO15G02730|Name=NO15G02730|organism=Nannochloropsis oceanica|type=gene|length=1800bpback to top protein sequence of NO15G02730.1 >NO15G02730.1-protein ID=NO15G02730.1-protein|Name=NO15G02730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=219bpback to top Synonyms
Publications
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