NO15G02620, NO15G02620 (gene) Nannochloropsis oceanica

Overview
NameNO15G02620
Unique NameNO15G02620
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length992
Alignment locationchr15:716567..717558 +

Link to JBrowse

Properties
Property NameValue
DescriptionGlutathione s
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:716567..717558 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036282Glutathione-S-Trfase_C_sf
IPR036249Thioredoxin-like_sf
IPR010987Glutathione-S-Trfase_C-like
IPR004045Glutathione_S-Trfase_N
IPR004046GST_C
Homology
BLAST of NO15G02620 vs. NCBI_GenBank
Match: EWM22337.1 (glutathione s [Nannochloropsis gaditana])

HSP 1 Score: 332.8 bits (852), Expect = 8.000e-88
Identity = 163/211 (77.25%), Postives = 185/211 (87.68%), Query Frame = 0
Query:    4 SLRLIYFNFGGRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYPFGSVPVLEVDGVVYAQSVGILRYVGRLGKLYPEDPLAGLAIDQIVGAVEDMIVATVPYLFAPEADKPLMKEKLEQEVYPRFFSAFENLLKADGKGFFYGQHLTIADLAVYPVLQWITTSIVGKESLDPYPLLKALFATIEGHEKVKDYYDYERRRTEEKEGEVG 215
            SLRLIYF+FGGRAEAIR+ALHVG V FED+RITE+EF QQK+ GKYPFGSVPVLEVD V YAQSVGILRYVGRLG LYPEDPLAGLAIDQ+VG+VED++VATVPYLFA E++K  +K+KLE+ VYPRFFSAFE LL AD +GFF G+HLTIADLAVYP+LQWITTSIVG ESLDP+PLLKALF  IE HE VKDYY+ ERR + ++  E G
Sbjct:   49 SLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLFASESEKASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVGPESLDPFPLLKALFRKIEEHEMVKDYYEQERRNSHKEGPEAG 259          
BLAST of NO15G02620 vs. NCBI_GenBank
Match: CEM30532.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 150.2 bits (378), Expect = 7.400e-33
Identity = 82/197 (41.62%), Postives = 117/197 (59.39%), Query Frame = 0
Query:    5 LRLIYFNFGGRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYPFGSVPVLEVDGVVYAQSVGILRYVGRLGKLYPEDPLAGLAIDQIVGAVEDMIVATVPYLF-APEADKPLMKEKLEQEVYPRFFSAFENLLKADGKGFFYGQHLTIADLAVYPVLQWITTSIVG--KESLD--PYPLLKALFATIEGHEKVK 197
            +++IYF F GRAE +RLAL +  ++FED R+T  EF + K++G  PFG  P++EVDG   AQSV  L Y GRL  L P D      + +    +ED++ A +P L    EA K  MK++L    +P++F   E L  A   G+  G  LTIADL++Y ++ W+   IVG  K+  D   +  L  +FAT++GHEKVK
Sbjct:    3 IKIIYFPFKGRAEPVRLALTIAGIDFEDTRVTGEEFAKMKADGVLPFGQFPIIEVDGKPLAQSVAQLIYAGRLAGLIPSDTWEEAKVMEFQMGIEDIVTAMIPALMEKDEAKKMEMKKELADVTFPKWFGYMEKL--AGDGGYAVGSKLTIADLSLYNLMSWLKDGIVGIPKDMFDHGKHTKLNKVFATVDGHEKVK 197          
BLAST of NO15G02620 vs. NCBI_GenBank
Match: KRX07459.1 (Thioredoxin-like fold [Pseudocohnilembus persalinus])

HSP 1 Score: 146.7 bits (369), Expect = 8.100e-32
Identity = 80/203 (39.41%), Postives = 124/203 (61.08%), Query Frame = 0
Query:   14 GRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYPFGSVPVLEVDGVVYAQSVGILRYVGRLGKLYP-EDPLAGLAIDQIVGAVEDMIVATVPYLFAPEADKPLM-KEKLEQEVYPRFFSAFENLLKADGKGFFYG-QHLTIADLAVYPVLQWITTSI---VGKESLDPYPLLKALFATIEGHEKVKDYYDYERRRTEEKE 211
            GRAE IRLA H+G ++FED RI+  EF +QK+EG + FG +PVLE+DG+ YAQS  ILRYVGRL  LYP EDP+  L +DQ + ++++++   +P  F  + ++ L  ++KL +  +  +    E+ LK DG G+F G Q ++IA+L +  V+ W+T      V  +    Y  L+     ++  +KVK+YY       ++KE
Sbjct:    3 GRAEPIRLAFHIGGIQFEDNRISMEEFSKQKNEGAFKFGQIPVLEIDGIQYAQSHAILRYVGRLTNLYPQEDPIQCLKVDQALYSIDEIVTRIIPTYFIKDKEEQLQARKKLSENEFSFWLEKLESQLK-DGNGYFAGNQQISIAELYMVQVVDWLTRGSLEGVPSDIAKKYGFLQKSIEFVKNIDKVKEYYARLEEEKKQKE 204          
BLAST of NO15G02620 vs. NCBI_GenBank
Match: XP_005111883.2 (PREDICTED: glutathione S-transferase 1-like [Aplysia californica])

HSP 1 Score: 142.1 bits (357), Expect = 2.000e-30
Identity = 77/196 (39.29%), Postives = 114/196 (58.16%), Query Frame = 0
Query:    4 SLRLIYFNFGGRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYPFGSVPVLEVDGVVYAQSVGILRYVGRLGKLYPEDPLAGLAIDQIVGAVEDMIVATVPYLF-APEADKPLMKEKLEQEVYPRFFSAFENLLKADGKGFFYGQHLTIADLAVYPVLQWITTSIVGKESLDPYPLLKALFATIEGHEKVKDY 199
            SL+L+YFN  GRAE IRL L     E+ED+R+T  +++ +K     PFGS+P LEV+G +Y QS+ I  ++ +   LY      GL ID ++  ++D+I   V ++F   E  K  +    +    PRFF  FE +LK +G G+F G  L++AD+AVY V   +    +G  S+D +PLLKAL   +   EK+K Y
Sbjct:    5 SLKLVYFNGKGRAEMIRLVLAAAGKEYEDVRVTSEQWKDKKP--SVPFGSLPCLEVNGKMYGQSMAIATFLAKEFGLYGNGNTDGLVIDGVLQLIQDIITLAVKFMFEKDEKKKEELMAAFKDTESPRFFGYFEKMLKENGTGYFVGSKLSLADIAVYDVFTGMMAPCLG--SMDSFPLLKALIDKVGADEKIKAY 196          
BLAST of NO15G02620 vs. NCBI_GenBank
Match: XP_013075526.1 (PREDICTED: probable glutathione S-transferase 7 [Biomphalaria glabrata] >XP_013075532.1 PREDICTED: probable glutathione S-transferase 7 [Biomphalaria glabrata])

HSP 1 Score: 137.5 bits (345), Expect = 4.900e-29
Identity = 86/210 (40.95%), Postives = 119/210 (56.67%), Query Frame = 0
Query:    2 PQSLRLIYFNFGGRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYPFGSVPVLEVDGVVYAQSVGILRYVGRLGKLYPEDPLAGLAIDQIVGAVEDMIVATV-PYLFAPEADKPLMKEKLEQEVYPRFFSAFENLLKADGKGFFYGQHLTIADLAVYPVLQWITTSIVGKE---SLDPYPLLKALFATIEGHEKVKDYYDYERRRTE 208
            PQ++++IYF+  GRAE  RL L     +FED+R T+  +  +K     PFG +PV+E+DG  +AQSV I  YV R    Y +  L GL IDQ+V    D + A V  Y    EA K  + + L++   P++ + FE LLK  G G+F G+ LT+AD  VY +     T   GK    SLD YPLL+ L   +E +EK+K Y   ER+ TE
Sbjct:    3 PQTIKIIYFDARGRAEVSRLMLVAAGQKFEDVRHTKETWPTEKP--NTPFGQLPVIEIDGKRFAQSVAIANYVAREFGFYGKTNLEGLEIDQVVQLGMDFLSAAVKSYHEKDEAKKAELNKSLKEVEAPKYLAFFEKLLKESGTGYFVGEALTLADFFVYDL-----TYAFGKRGVLSLDSYPLLQELQNKVESNEKIKAYL-AERKETE 204          
BLAST of NO15G02620 vs. NCBI_GenBank
Match: CBJ30560.1 (Glutathione S-transferase [Ectocarpus siliculosus])

HSP 1 Score: 135.2 bits (339), Expect = 2.400e-28
Identity = 70/200 (35.00%), Postives = 112/200 (56.00%), Query Frame = 0
Query:    4 SLRLIYFNFGGRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYPFGSVPVLEVDGVVYAQSVGILRYVGRLGKLYPEDPLAGLAIDQIVGAVEDMIVATVPYLFAPEADKPL-MKEKLEQEVYPRFFSAFENLLKADGKGFFYGQHLTIADLAVYPVLQWITTSI---VGKESLDPYPLLKALFATIEGHEKVKDYY 200
            S+ L YF+  G AEAIRLA +VG + F+D R++ +EF + K +   PF  +P+L VD  V+ QS  ILRY G++G LYP DP+A   +D ++  + D+  A  P ++   A + L M+++L +   P +    E  L+  G  FF G+ +TI DL +Y  ++W+   +   +    L  +  ++A    +  H KV DYY
Sbjct:    3 SITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKRD--LPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYY 200          
BLAST of NO15G02620 vs. NCBI_GenBank
Match: EPZ36256.1 (Thioredoxin-like fold domain-containing protein [Rozella allomycis CSF55])

HSP 1 Score: 135.2 bits (339), Expect = 2.400e-28
Identity = 74/203 (36.45%), Postives = 117/203 (57.64%), Query Frame = 0
Query:    1 MPQSLRLIYFNFGGRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYPFGSVPVLEVDGVVYAQSVGILRYVGRLGKLYP-EDPLAGLAIDQIVGAVEDMIVATVPYLFAPEADKPL-MKEKLEQEVYPRFFSAFENLLKADGKGFFYGQHLTIADLAVYPVLQWITTSI---VGKESLDPYPLLKALFATIEGHEKVKDY 199
            +P++++L YF   GRAE  RLA H+G V F+D R+   EF   K +   P G +P++ +DG V AQS+GILRY G L  LYP  DPL  L +DQIV ++ D+    VP     + D+ +  ++++ +  +P  F   E  LK  G  +  G +LT+ADL++Y +++ + + I   V K  ++PYPL+      +  H KV ++
Sbjct:    3 VPKNIKLTYFAGKGRAEPTRLAFHIGGVAFQDERVKGEEF--AKIKPTLPLGQLPIITIDGTVIAQSLGILRYAGTLTGLYPNNDPLKALLVDQIVFSLGDVTDMLVPTFGIQDLDQRIKARKEIVENRWPALFKGIEEALKKHGGKYCVGDNLTVADLSLYTLVEGLKSGILDGVPKNVVEPYPLMTKFSNQVANHPKVVEW 203          
BLAST of NO15G02620 vs. NCBI_GenBank
Match: XP_002906309.1 (glutathione S-transferase, putative [Phytophthora infestans T30-4] >EEY65710.1 glutathione S-transferase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 133.7 bits (335), Expect = 7.100e-28
Identity = 80/202 (39.60%), Postives = 115/202 (56.93%), Query Frame = 0
Query:    4 SLRLIYFNFGGRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYPFGSVPVLEVDGVVYAQSVGILRYVGRLGKLYP-EDPLAGLAIDQIVGAVEDMIVATVPYLFAPEAD-KPLMKEKLEQEVYPRFFSAFENLL-KADGKGFFYGQHLTIADLAVYPVLQWITTSI---VGKESLDPYPLLKALFATIEGHEKVKDYY 200
            S+RL YFNFGGRAE++RLAL+VG V FED R+T  EF   KS   +P G VPVLEVDG V  Q+  ILRYVGRLG LYP   P A L +D+++ A+ +M    +P     +AD K  M+E+L     P + +  E+ L K      F    + + ++++Y  ++     +   +    LD Y    A F  +  H++VK++Y
Sbjct:    6 SIRLTYFNFGGRAESVRLALYVGGVPFEDKRLTREEFGALKS--SFPLGQVPVLEVDGQVLTQTDAILRYVGRLGGLYPTSSPFAALKVDEMLHALCEMGEQIIPSFEERDADKKKAMREELANVTIPHYAACIEDRLEKLQQLPSFQSDVVYVHEISLYTWMKGFRDGLLDHIPTTILDDYKFHNATFDKVAAHQRVKEWY 205          
BLAST of NO15G02620 vs. NCBI_GenBank
Match: CEP02483.1 (hypothetical protein PBRA_009067 [Plasmodiophora brassicae])

HSP 1 Score: 132.1 bits (331), Expect = 2.100e-27
Identity = 71/200 (35.50%), Postives = 115/200 (57.50%), Query Frame = 0
Query:    4 SLRLIYFNFGGRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYPFGSVPVLEVDGVVYAQSVGILRYVGRLGKLYPEDPLAGLAIDQIVGAVEDMIVATVPYLFAPEADKPL-MKEKLEQEVYPRFFSAFENLLKADG-KGFFYGQHLTIADLAVYPVLQWITTSIVG---KESLDPYPLLKALFATIEGHEKVKDY 199
            S++L YF+  GRAE IRLALHV  V +E  R+   ++   K   K PFG +PV+ +DGV YAQ+  +LRYV  +GK+ P  P+  L +DQI+ A  D++ A +P L  P+A K + M+++L     P      +  L  +   G+  G  +TIAD++++ + QW  + ++    K+ +D YP +  +  T+  H KV ++
Sbjct:    5 SIKLTYFDMPGRAETIRLALHVAGVPYEFERVARDQWPSLKP--KTPFGGLPVMTIDGVQYAQTHALLRYVAAIGKMEPATPIDRLKVDQIIEANTDIVTALMPSLREPDAQKKMAMRKELADTTLPPLLKGIDRALGQNATPGYTCGSTITIADISLWGLTQWFRSGMIDGIPKDLIDGYPAIAKVVQTVGEHPKVAEW 202          
BLAST of NO15G02620 vs. NCBI_GenBank
Match: XP_013071550.1 (PREDICTED: probable glutathione S-transferase 7 [Biomphalaria glabrata])

HSP 1 Score: 132.1 bits (331), Expect = 2.100e-27
Identity = 74/200 (37.00%), Postives = 116/200 (58.00%), Query Frame = 0
Query:    3 QSLRLIYFNFGGRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYPFGSVPVLEVDGVVYAQSVGILRYVGRLGKLYPEDPLAGLAIDQIVGAVEDMIVATVPYLFAPEADKPLMKE----KLEQEVYPRFFSAFENLLKADGKGFFYGQHLTIADLAVYPVLQWITTSIVGKESLDPYPLLKALFATIEGHEKVKDY 199
            +S+++IYF+  GRAE +RL L     EFED+R+   ++++ K     PFG VPVLE+DG   AQS+ +  ++ R  KLY +D    L ID +    ED+I +   Y  +     P+ KE    +++ EV P+F   FE+LLK +G GFF G  +T+AD+ +Y +        V  E++D +PL+K +  TI  +E++K Y
Sbjct:    5 KSIKVIYFDLNGRAEVLRLVLTYAGKEFEDVRLAREKWQEVKP--TTPFGQVPVLEIDGKKKAQSIALAAFLAREFKLYGKDNWDALTIDTVAQLAEDLIQS---YARSFRESDPVKKEAIVTEVKTEVGPKFLGFFESLLKENGTGFFVGNDITLADIIIYDLATGFLK--VAFEAIDNFPLVKKVVDTIGDNERIKKY 197          
The following BLAST results are available for this feature:
BLAST of NO15G02620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22337.18.000e-8877.25glutathione s [Nannochloropsis gaditana][more]
CEM30532.17.400e-3341.62unnamed protein product [Vitrella brassicaformis C... [more]
KRX07459.18.100e-3239.41Thioredoxin-like fold [Pseudocohnilembus persalinu... [more]
XP_005111883.22.000e-3039.29PREDICTED: glutathione S-transferase 1-like [Aplys... [more]
XP_013075526.14.900e-2940.95PREDICTED: probable glutathione S-transferase 7 [B... [more]
CBJ30560.12.400e-2835.00Glutathione S-transferase [Ectocarpus siliculosus][more]
EPZ36256.12.400e-2836.45Thioredoxin-like fold domain-containing protein [R... [more]
XP_002906309.17.100e-2839.60glutathione S-transferase, putative [Phytophthora ... [more]
CEP02483.12.100e-2735.50hypothetical protein PBRA_009067 [Plasmodiophora b... [more]
XP_013071550.12.100e-2737.00PREDICTED: probable glutathione S-transferase 7 [B... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL141nonsL141Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR064ngnoR064Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001333NSK001333Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02620.1NO15G02620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|588008gene_4823Nannochloropsis oceanica (N. oceanica CCMP1779)gene
GSTgene8103Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02620.1NO15G02620.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02620 ID=NO15G02620|Name=NO15G02620|organism=Nannochloropsis oceanica|type=gene|length=992bp
ATCACAGTCCCAACATGCCTCAATCTTTACGCCTCATCTATTTCAATTTC
GGGGGTCGAGCGGAAGCCATCCGTTTGGCTTTACACGTTGGATCTGTCGA
GTTTGAAGACATAAGAATAACCGAGAGGGAATTCCGCCAGCAGAAGTCTG
gtacgtacgcaaagattctggtagttgtccgataagatttaactcatcaa
acatccgtttatcctctttccaccttgtcctcttcaataacccctcccag
AGGGCAAGTACCCCTTTGGAAGCGTCCCCGTCCTCGAAGTCGACGGTGTC
GTCTATGCACAGTCTGTGGGCATCCTCCGCTATGTCGGTCGGCTCGGTAA
GCTCTACCCAGAAGACCCTCTGGCAGGGCTTGCTATCGATCAAATCGTCG
GAGCAGTGGAAGATATGATCGTCGCTACTGTACCCTACCTCTTCGCTCCT
GAAGCAGACAAACCCTTGATGAAGGAGAAGCTGGAGCAGGAAGTGTACCC
ACGGTTTTTCTCGGCGTTTGAAAATTTGTTGAAGGCAGATGGGAAGGGAT
TTTTTTATGGGCAGCACTTGACAATTGCCGATTTGGCGGTCTACCCGGTG
CTGCAATGGATAACGACCTCAATTGTTGGTAAGGAGAGCTTGGACCCTTA
CCCTCTGCTCAAGGCGTTGTTTGCGACGATTGAGGGGCATGAGAAGGTCA
AGGACTATTATGACTACGAGAGGCGACGGACCGAGGAAAAAGAAGGGGAA
GTGGGGCCAACAAGCTGAGGTGTGAATAAATGTGAGGGTTTATGTAAGGG
AGGGTAGATGGGGAAGTGAAGTCGGTAGTAGGTTCTGTTCTGGGAATGCC
TTGTAAGAAGAGAACAGGAATAGGAGAAGTGAGCGCGAGTTTTGTGAAAT
CCTGATGAGAGGCGAGTGTCATTAGTTTGGTCTTTGGCAAACGGGAAGAG
GTTTGAAAACACCCCCCCACATGGTTGTAGTTAACTCTTGGT
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protein sequence of NO15G02620.1

>NO15G02620.1-protein ID=NO15G02620.1-protein|Name=NO15G02620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=218bp
MPQSLRLIYFNFGGRAEAIRLALHVGSVEFEDIRITEREFRQQKSEGKYP
FGSVPVLEVDGVVYAQSVGILRYVGRLGKLYPEDPLAGLAIDQIVGAVED
MIVATVPYLFAPEADKPLMKEKLEQEVYPRFFSAFENLLKADGKGFFYGQ
HLTIADLAVYPVLQWITTSIVGKESLDPYPLLKALFATIEGHEKVKDYYD
YERRRTEEKEGEVGPTS*
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Synonyms
Publications