NO15G02080, NO15G02080 (gene) Nannochloropsis oceanica

Overview
NameNO15G02080
Unique NameNO15G02080
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1451
Alignment locationchr15:588870..590320 +

Link to JBrowse

Properties
Property NameValue
DescriptionProtein phosphatase inhibitor
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:588870..590320 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009966regulation of signal transduction
GO:0043666regulation of phosphoprotein phosphatase activity
GO:0009987cellular process
Vocabulary: Molecular Function
TermDefinition
GO:0004864protein phosphatase inhibitor activity
Vocabulary: INTERPRO
TermDefinition
IPR007062PPI-2
Homology
[Close]
BLAST of NO15G02080 vs. NCBI_GenBank
Match: XP_005854558.1 (protein phosphatase inhibitor [Nannochloropsis gaditana CCMP526] >EKU21805.1 protein phosphatase inhibitor [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 189.5 bits (480), Expect = 1.400e-44
Identity = 143/227 (63.00%), Postives = 162/227 (71.37%), Query Frame = 0 
Query:   30 GDNNDDERGRRGIRWDEETIAEHDKLRGTRQKIDEPPTPYHVSYEPADAEDSNMDIGIPDGGGRGGRQGSYGTESISSSYGGNDVGGPFDQHRVSRSGSVCSGPDTPGDAAKKTQPSYLAENWQALTIALEQAARNREAL--ISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERLAEEKRIKCPEHKAFAQKRLSHYDEYKRLQEWRQAH 255
            G   +D+  RRG+RWDEETIAEHDKLRGTRQKIDEPPTPYH+SYEPADAED NM +   DG G G      G +           G P  ++RVSRS SV S P TP   AKK+QP YLAENWQ LT ALEQAA+NREAL             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +R +++K +K P+H AFA+KR+SHYDEYKRLQEWR+AH
Sbjct:    5 GCRQEDDASRRGVRWDEETIAEHDKLRGTRQKIDEPPTPYHMSYEPADAEDDNMKL---DGTGEGEDDKPPGNK-----------GSPVTRNRVSRSNSVSSAPGTPSQIAKKSQPGYLAENWQELTTALEQAAQNREALRQARGSSSAVSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSGHDRASDDKLMKSPQHAAFAKKRMSHYDEYKRLQEWRKAH 217
[Close]
BLAST of NO15G02080 vs. NCBI_GenBank
Match: EWM22368.1 (protein phosphatase inhibitor [Nannochloropsis gaditana])

HSP 1 Score: 189.5 bits (480), Expect = 1.400e-44
Identity = 143/227 (63.00%), Postives = 162/227 (71.37%), Query Frame = 0 
Query:   30 GDNNDDERGRRGIRWDEETIAEHDKLRGTRQKIDEPPTPYHVSYEPADAEDSNMDIGIPDGGGRGGRQGSYGTESISSSYGGNDVGGPFDQHRVSRSGSVCSGPDTPGDAAKKTQPSYLAENWQALTIALEQAARNREAL--ISRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERLAEEKRIKCPEHKAFAQKRLSHYDEYKRLQEWRQAH 255
            G   +D+  RRG+RWDEETIAEHDKLRGTRQKIDEPPTPYH+SYEPADAED NM +   DG G G      G +           G P  ++RVSRS SV S P TP   AKK+QP YLAENWQ LT ALEQAA+NREAL             XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +R +++K +K P+H AFA+KR+SHYDEYKRLQEWR+AH
Sbjct:   54 GCRQEDDASRRGVRWDEETIAEHDKLRGTRQKIDEPPTPYHMSYEPADAEDDNMKL---DGTGEGEDDKPPGNK-----------GSPVTRNRVSRSNSVSSAPGTPSQIAKKSQPGYLAENWQELTTALEQAAQNREALRQARGSSSAVSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDSGHDRASDDKLMKSPQHAAFAKKRMSHYDEYKRLQEWRKAH 266
[Close]
BLAST of NO15G02080 vs. NCBI_GenBank
Match: GBG33214.1 (Hypothetical Protein FCC1311_094382 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 67.0 bits (162), Expect = 1.000e-7
Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 0 
Query:   27 GKMGDNNDDERGRRGIRWDEETIAEHDKLRGTRQKIDEPPTPYHVSYEPADAE-------DSNMDIGIPDGGGRGG 96
            G  G+ +DD  G R +RWDE TIAEHDKLRGTRQKIDEP TP+H     ++A+       DS + +   DG   GG
Sbjct:   13 GAAGEEDDDPEGSRHVRWDEATIAEHDKLRGTRQKIDEPDTPFHRDSFDSEADEDFEEDGDSAVKVVFEDGVKPGG 88
The following BLAST results are available for this feature:
BLAST of NO15G02080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 3
Match NameE-valueIdentityDescription
XP_005854558.11.400e-4463.00protein phosphatase inhibitor [Nannochloropsis gad... [more]
EWM22368.11.400e-4463.00protein phosphatase inhibitor [Nannochloropsis gad... [more]
GBG33214.11.000e-750.00Hypothetical Protein FCC1311_094382 [Aurantiochytr... [more]
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL147nonsL147Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001386NSK001386Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G02080.1NO15G02080.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|442566gene_4760Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100066g2gene8055Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G02080.1NO15G02080.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G02080 ID=NO15G02080|Name=NO15G02080|organism=Nannochloropsis oceanica|type=gene|length=1451bp
ATGATGCATTTCCCACACATTTCGAAATCGAAAAGgtaggagcagcaata
cggttcgccacctaatatgtcccgtggacacgtgatttcacatcacgtga
atgttccccgcaagaggacattctgtggtgcttgcctccattgaacctgt
ggacaggcgtcgtgttgtactgggacgctcggaaagagcgtcctcttttt
cacaatgccgtgccgtgcaggtttcgtatttttgggtccaaagatgcacc
atttaccacttccccattcctccttcaagATACCCAGGCCCAGAGTGTCA
GCGGCAGGAGCAGGAGCAGCCAGGCAAGATGGGCGACAACAACGACGACG
AGAGGGGCAGGAGAGGgtacgtgtgataggcacgatggctgggaggggtg
gattgaccgactacatgagtgaggcacgacgtagtgggcaaatgcggatc
gatttcctttagcgtgagcccctgtcaatcatacaccagcaccacacttt
cccattccttatcttccaagtagCATCCGATGGGATGAGGAAACGATTGC
GGAGCACGATAAGCTTCGTGGGACCCGACAAAAGgtatgttgtcctgccc
tcttcagattcctgtcgatgtgtcttgatgttgacgctatacacccatgt
cctctatttgtgctgtatcgacgcgtatgcgtgatcgcactcttaccttt
ttcgtctttctgtactccacgcgctcatttaaactactccaattcatgga
caccatcatctcaacctccctacccacctccccacctacccccaccacag
ATCGATGAACCCCCTACGCCGTACCACGTGTCCTACGAGCCAGCCGACGC
CGAAGACAGCAATATGGACATTGGTATTCCTGATGGAGGAGGAAGAGGGG
GACGTCAAGGGAGCTACGGCACCGAAAGCATCAGCAGCAGCTACGGTGGC
AACGACGTTGGGGGCCCTTTCGACCAACACCGAGTGTCCCGCTCGGGGTC
TGTGTGTTCGGGTCCCGACACGCCGGGCGATGCTGCGAAGAAAACACAAC
CTAGTTATCTTGCTGAGAACTGGCAAGCCCTTACAATAGCCCTAGAGCAA
GCGGCCCGGAACCGCGAAGCCTTAATCTCCCGCTCTTCCTCCTCCTCCTC
TGCCTCTGGAAGTGGAGGGGGGGAGTCGTTCTCGCCATCTATGTCCAGGA
GTGGCAGCTCAAGCAATAGCAGTAGGAGGGAGAGGGCAACCAGTTTTTCG
TCTGACTCGGACATCGAGAGATTGGCAGAGGAGAAAAGGATAAAGTGTCC
CGAGCATAAGGCATTTGCCCAGAAGAGGTTGAGTCATTATGATGAGTATA
AGAGGCTGCAGGAGTGGAGGCAGGCGCATGAGAAAGAGGAGGAGGAGGAG
GAGGAGGAGGAGGAAGAAGAAGAGGGAAGGGAGGAGGGACGGGATGCATA
G
back to top

protein sequence of NO15G02080.1

>NO15G02080.1-protein ID=NO15G02080.1-protein|Name=NO15G02080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=278bp
MMHFPHISKSKRYPGPECQRQEQEQPGKMGDNNDDERGRRGIRWDEETIA
EHDKLRGTRQKIDEPPTPYHVSYEPADAEDSNMDIGIPDGGGRGGRQGSY
GTESISSSYGGNDVGGPFDQHRVSRSGSVCSGPDTPGDAAKKTQPSYLAE
NWQALTIALEQAARNREALISRSSSSSSASGSGGGESFSPSMSRSGSSSN
SSRRERATSFSSDSDIERLAEEKRIKCPEHKAFAQKRLSHYDEYKRLQEW
RQAHEKEEEEEEEEEEEEEGREEGRDA*
back to top
Synonyms
Publications