NO15G02070, NO15G02070 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02070 vs. NCBI_GenBank
Match: XP_005854553.1 (hypothetical protein NGA_0239600 [Nannochloropsis gaditana CCMP526] >EKU21800.1 hypothetical protein NGA_0239600 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 211.5 bits (537), Expect = 1.400e-51 Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 0
Query: 1 MHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDLKNVPIYDQVLQWFAQS 112
MHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFED+GRQ +TYGHREAPEALCRKIDEVKAED+M IARRAISKPVSISAVGKDL+ VP Y+QVLQWFAQS
Sbjct: 223 MHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDIGRQMITYGHREAPEALCRKIDEVKAEDLMKIARRAISKPVSISAVGKDLRTVPNYEQVLQWFAQS 333
BLAST of NO15G02070 vs. NCBI_GenBank
Match: EWM22439.1 (Peptidase M16 [Nannochloropsis gaditana]) HSP 1 Score: 211.5 bits (537), Expect = 1.400e-51 Identity = 102/111 (91.89%), Postives = 107/111 (96.40%), Query Frame = 0
Query: 1 MHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDLKNVPIYDQVLQWFAQS 112
MHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFED+GRQ +TYGHREAPEALCRKIDEVKAED+M IARRAISKPVSISAVGKDL+ VP Y+QVLQWFAQS
Sbjct: 425 MHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDIGRQMITYGHREAPEALCRKIDEVKAEDLMKIARRAISKPVSISAVGKDLRTVPNYEQVLQWFAQS 535
BLAST of NO15G02070 vs. NCBI_GenBank
Match: EWM22363.1 (Peptidase M16 [Nannochloropsis gaditana]) HSP 1 Score: 209.9 bits (533), Expect = 4.000e-51 Identity = 101/111 (90.99%), Postives = 107/111 (96.40%), Query Frame = 0
Query: 1 MHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDLKNVPIYDQVLQWFAQS 112
MHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQL+SRIILFED+GRQ +TYGHREAPEALCRKIDEVKAED+M IARRAISKPVSISAVGKDL+ VP Y+QVLQWFAQS
Sbjct: 240 MHEFCAQICKLALTPVDPVELSRARNMLKCNVLTQLKSRIILFEDIGRQMITYGHREAPEALCRKIDEVKAEDLMKIARRAISKPVSISAVGKDLRTVPNYEQVLQWFAQS 350
BLAST of NO15G02070 vs. NCBI_GenBank
Match: GAX23778.1 (mitochondrial-processing peptidase subunit alpha [Fistulifera solaris]) HSP 1 Score: 118.2 bits (295), Expect = 1.600e-23 Identity = 54/104 (51.92%), Postives = 74/104 (71.15%), Query Frame = 0
Query: 4 FCAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDLKNVPIYDQVLQW 108
F + +LA+ V EL RARNMLKCNVLTQLESR++LFED+GRQ +TYG RE C+KID V ED+ +A +A+ KP +++VG DL +VP +D+++ W
Sbjct: 452 FTHHLAQLAVNHVSDEELDRARNMLKCNVLTQLESRLVLFEDMGRQVLTYGQRENMNVTCKKIDAVTKEDLRQVASKALEKPPCLASVGSDLSHVPRHDELVAW 555
BLAST of NO15G02070 vs. NCBI_GenBank
Match: XP_002289075.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED94511.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 117.9 bits (294), Expect = 2.100e-23 Identity = 56/101 (55.45%), Postives = 71/101 (70.30%), Query Frame = 0
Query: 10 KLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDLKNVPIYDQVLQWFAQ 111
KLA V EL RARNMLKCNVLTQLESR++LFED+GRQ +TYG RE +C KID V ED+ + ++A+ KP ++S VG D+ VP ++V QW AQ
Sbjct: 462 KLADQLVTDEELDRARNMLKCNVLTQLESRLVLFEDIGRQILTYGKREDAATMCAKIDAVSKEDIREVVQKALLKPPTLSTVGLDISKVPKVEEVTQWLAQ 562
BLAST of NO15G02070 vs. NCBI_GenBank
Match: OEU16163.1 (LuxS/MPP-like metallohydrolase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 115.9 bits (289), Expect = 7.900e-23 Identity = 57/103 (55.34%), Postives = 72/103 (69.90%), Query Frame = 0
Query: 7 QICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAI-SKPVSISAVGKDLKNVPIYDQVLQWF 109
Q+ +A+ PV +ELSRARNMLKCNVLTQLESR+ILFED+GRQ +TYG RE CRKID V A D+ +AR + + ++ A G L VP YD+V +WF
Sbjct: 338 QLACVAIQPVGDIELSRARNMLKCNVLTQLESRLILFEDMGRQVLTYGKREDAATTCRKIDSVTAGDIQKLAREMLQNHQPTLVATGSHLDKVPTYDEVSRWF 440
BLAST of NO15G02070 vs. NCBI_GenBank
Match: EJK70440.1 (hypothetical protein THAOC_08203 [Thalassiosira oceanica]) HSP 1 Score: 109.0 bits (271), Expect = 9.700e-21 Identity = 52/87 (59.77%), Postives = 63/87 (72.41%), Query Frame = 0
Query: 20 ELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDLKNVPIYDQVLQ 107
ELSRARNMLKCNVLTQLESR++LFED+ RQ TYG E +C KID V ED+ I R ++ KPV++SAVG+D+ VP D V Q
Sbjct: 455 ELSRARNMLKCNVLTQLESRLVLFEDVARQISTYGKVEDAATMCEKIDAVTKEDIQRIVRESLKKPVTMSAVGRDISRVPRVDDVSQ 541
BLAST of NO15G02070 vs. NCBI_GenBank
Match: XP_002183564.1 (predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1] >EEC44746.1 predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 107.1 bits (266), Expect = 3.700e-20 Identity = 51/101 (50.50%), Postives = 72/101 (71.29%), Query Frame = 0
Query: 8 ICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDLKNVPIYDQVLQWF 109
+ +LA TPV ELSRAR MLK NVLTQLESR++LFED+GRQ +TY R+ +C KID V A+D++ IA+ ++ P ++++VG +L VP +V +WF
Sbjct: 340 VLRLASTPVTDEELSRARKMLKNNVLTQLESRLVLFEDMGRQILTYNSRQDMHQVCAKIDAVTADDLVRIAQNSLRHPPTLASVGSNLAYVPQQSEVSEWF 440
BLAST of NO15G02070 vs. NCBI_GenBank
Match: CCA25279.1 (conserved hypothetical protein [Albugo laibachii Nc14]) HSP 1 Score: 106.7 bits (265), Expect = 4.800e-20 Identity = 53/100 (53.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query: 5 CAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDLKNVPIYDQV 105
C Q+ +A VDP+ELSRA+N LK +VL LESR+IL+ED+GRQ +TYG+RE+P+ +C KID+V AED+ + R A+ + S+ G DLK P YDQV
Sbjct: 508 CNQLLHIAQVVVDPLELSRAKNQLKSSVLMNLESRMILYEDIGRQLLTYGYRESPQRVCAKIDKVTAEDLQRVMREAMRERPSMVYYG-DLKLFPTYDQV 606
BLAST of NO15G02070 vs. NCBI_GenBank
Match: CCI40388.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 105.5 bits (262), Expect = 1.100e-19 Identity = 51/100 (51.00%), Postives = 73/100 (73.00%), Query Frame = 0
Query: 5 CAQICKLALTPVDPVELSRARNMLKCNVLTQLESRIILFEDLGRQFVTYGHREAPEALCRKIDEVKAEDVMNIARRAISKPVSISAVGKDLKNVPIYDQV 105
C Q+ +A VDP+ELSRA+N LK +VL LESR+IL+ED+GRQ +TYG+RE+P+++C KID+V +D+ + R A+++ S+ G DLK P YDQV
Sbjct: 438 CNQLLHVAQIAVDPLELSRAKNQLKSSVLMNLESRMILYEDIGRQLLTYGYRESPQSVCAKIDKVTTDDIQRVMRTAMTERPSMVYYG-DLKLFPAYDQV 536 The following BLAST results are available for this feature:
BLAST of NO15G02070 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02070 ID=NO15G02070|Name=NO15G02070|organism=Nannochloropsis oceanica|type=gene|length=336bpback to top protein sequence of NO15G02070.1 >NO15G02070.1-protein ID=NO15G02070.1-protein|Name=NO15G02070.1|organism=Nannochloropsis oceanica|type=polypeptide|length=112bpback to top Synonyms
Publications
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