NO15G02000, NO15G02000 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G02000 vs. NCBI_GenBank
Match: EWM22390.1 (5 -3 dna helicase [Nannochloropsis gaditana]) HSP 1 Score: 835.1 bits (2156), Expect = 2.200e-238 Identity = 439/832 (52.76%), Postives = 541/832 (65.02%), Query Frame = 0
Query: 131 PTVRAQPIKTGWLDAQLARLCPGLKLDVLQRRALEEVVIRRNNVFLTGSGGVGKSYVTTLFIQLFKEHYGAEYGKKVCVTASTGIASTQLNGTTLHTATGVGVPRCWDNFGRMFGHDKNVEHRWSKSYEVLIIDEISMLSGEMLDALSYTIQRIRHNASPFGGLQVIFIGDFAQLPPVPEDPTYTTNDFVRPEDWYFPRHHEFWHMPVXXXXXXXXXXXXXXXXXXYCRMREGLNPQPRQEVLFSNRGLALQSEVWWNLDLRIIELTKVFRQDDVHFIATLNRMRKGETTHEDLHWLNQEFYYAPFQKDLTQQKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQMLESGMEEEVYTPNQTTREQSQSPISTFVAIETGGDEGAADSVTGAG-----TGRCEEAATR------------ATLSKSSALHLYPKNVLVERRNKLMLDALDSPLEEYDTHDFVWHENTGAILRRGQSPNAFDGRVRRDLQLLLANHTYYKTCLAAERVELKLGAKVLLLKNLDLVGPKKLVNGSVGVVVSWAPLDDPCLDLDMEEEVTGKGKKGGNGGAGTEEQMEGLTSRKASPSPTKRRRDKEHDLIEYKEKVVNEWFEANKRRIPVVEFTNGRKKAIYPELLSENIVGVGSTCRIQLPLMIGFAISIHKSQGMTLQEALVDVQECFDGGQTYVALSRVGPRLGLRLARRLGMDSIKVNPTFLLWNRLRNAMDHRRMVLLSLLASHKGPGATMEAKRVESLGMKGLYDEAIKILRIPAKKGEELPEIRKAWAALKNSLDPLKPGRDERKKEVRILHWQCLDWWKARNNEKMRAIY 946
P + + GW+ +QL +C G+ LD LQ ALEEV++RR NVFL+GSGGVGKS+VT L I L + H+G + +KVC+TASTGIAST ++GTTLH ATGVGVPRCWD+FGRMF DK VE RWS+ YEVL +DEISMLSGEMLDAL+ IQ++R + PFGGLQV+F+GDFAQLPPVPEDP+YTT+DFVR +DW F H +FWHMPV R R RQEVLFSNRGLA QS+ WW+LD+R+IEL KVFRQDD FIATLNR+R G TT ED WLNQEFY+AP +++ LQ E E + RE+ +A +T G++G S +G G G +A+ R A LHLYP N LVERRN++MLD L + LEEY+ DFVWHE++G ILRR ++ +DGR RRDL+LLL NH YYKTCLAAERV+LKLGAK+LLLKN+DL+GP+KLVNGSVG+VV WAP +P D D G G GG E + + P ++ D + L YKE++V W+ ANK RIPVV F+NGRKKAI+PEL SE IVGVG TCR+QLPLMIGFAISIHKSQGMTLQEALVDV+ CFDGGQTYVALSRVGPR GLRLA+RL ++KVNPTFLLW+ L M RR +L++L + GA A E LG+KGL+ EA+ +L K+ E +++AWA+LK +LD LKPG++ ++++V ILHWQ LDWW+ N M AIY
Sbjct: 92 PCEGSMNMSAGWMHSQLDNMCAGINLDALQYNALEEVLLRRRNVFLSGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDFWHMPVISRGALLCDAETQGPGLE--RGRVAPRRGARQEVLFSNRGLAFQSDAWWDLDMRVIELKKVFRQDDARFIATLNRVRTGHTTAEDFDWLNQEFYHAPLRREQA---------------------------------------LQESERKSRERPQLKDGGGREEXSDQKKRKLAWKTEGEDGHGVSASGGGPASTSLGEAAQASLRQLGSLEMTRPAPACQIAEEPLHLYPVNALVERRNRVMLDRLPTRLEEYEAQDFVWHEDSGVILRRQETAQGYDGRQRRDLELLLGNHLYYKTCLAAERVKLKLGAKILLLKNVDLLGPQKLVNGSVGMVVEWAPEGNPFFDQDTSG--VGAGAAGGESEENLREPSPAPHAVETRPPSSENGTDNKRSLHCYKERLVEAWYTANKSRIPVVLFSNGRKKAIFPELFSETIVGVGCTCRLQLPLMIGFAISIHKSQGMTLQEALVDVERCFDGGQTYVALSRVGPRAGLRLAQRLSYSNVKVNPTFLLWHNLHKTMVTRRREVLAMLEAEGDSGAVTHA---EGLGLKGLHQEAVAVLMDSTKRAETPVALKRAWASLKKTLDQLKPGKNLQRQDVDILHWQMLDWWRPGNARTMEAIY 877
BLAST of NO15G02000 vs. NCBI_GenBank
Match: XP_005854688.1 (dna helicase aaa atpase, partial [Nannochloropsis gaditana CCMP526] >EKU21672.1 dna helicase aaa atpase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 242.3 bits (617), Expect = 6.300e-60 Identity = 109/157 (69.43%), Postives = 131/157 (83.44%), Query Frame = 0
Query: 177 TGSGGVGKSYVTTLFIQLFKEHYGAEYGKKVCVTASTGIASTQLNGTTLHTATGVGVPRCWDNFGRMFGHDKNVEHRWSKSYEVLIIDEISMLSGEMLDALSYTIQRIRHNASPFGGLQVIFIGDFAQLPPVPEDPTYTTNDFVRPEDWYFPRHHEF 334
+GSGGVGKS+VT L I L + H+G + +KVC+TASTGIAST ++GTTLH ATGVGVPRCWD+FGRMF DK VE RWS+ YEVL +DEISMLSGEMLDAL+ IQ++R + PFGGLQV+F+GDFAQLPPVPEDP+YTT+DFVR +DW F H +F
Sbjct: 1 SGSGGVGKSFVTNLIINLLRRHHGRAFSRKVCITASTGIASTHVDGTTLHAATGVGVPRCWDHFGRMFYQDKVVERRWSRHYEVLFVDEISMLSGEMLDALNRIIQKLRRSKEPFGGLQVVFVGDFAQLPPVPEDPSYTTSDFVRRQDWAFEGHEDF 157
BLAST of NO15G02000 vs. NCBI_GenBank
Match: XP_014155604.1 (hypothetical protein SARC_05992 [Sphaeroforma arctica JP610] >KNC81702.1 hypothetical protein SARC_05992 [Sphaeroforma arctica JP610]) HSP 1 Score: 206.8 bits (525), Expect = 2.900e-49 Identity = 194/716 (27.09%), Postives = 282/716 (39.39%), Query Frame = 0
Query: 152 PGLKLDVLQRRALEEVVIRRNNVFLTGSGGVGKSYVTTLFIQLFKEHYGAE-YGKKVCVTASTGIASTQLNGTTLHTATGVGVPRCWDNFGRMFGHDKNVEHRWSKSYEVLIIDEISMLSGEMLDALSYTIQ-----------RIRHNASPFGGLQVIFIGDFAQLPPVPEDPTYTTNDFVRPEDWYFPRHHEFWHMPVXXXXXXXXXXXXXXXXXXYCRMREGL--------NPQPRQEVLFSNRGLALQSEVWWNLDLRIIELTKVFRQ-DDVHFIATLNRMRKGETTHEDLHWLNQEFYYAPFQKDLTQQKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQMLESGMEEEVYTPNQTTREQSQSPISTFVAIETGGDEGAADSVTGAGTGRCEEAATRATLSKSSALHLYPKNVLVERRNKLMLDALDSPLEEYDTHDFVWHENTGAILRRGQSPNAFDGRVRRDLQLLLANHTYYKTCLAAERVELKLGAKVLLLKNLDLVGP---KKLVNGSVGVVVSWAPLDDPCLDLDMEEEVTGKGKKGGNGGAGTEEQMEGLTSRKASPSPTKRRRDKEHDLIEYKEKVVNEWFEANKRRIPVVEFTNGRKKAIYPELLSENIVGVGSTCRIQLPLMIGFAISIHKSQGMTLQEALVDVQECFDGGQTYVALSRVGPRLGLRLARRLGMDSIKVNPTFLLWNRLRNAMD 844
P L LD Q R + ++ NVFLTGS GVGKS+ T K Y E Y +V V A TG+A+T ++GTT+++ATGVG+P +F RM + W++ E+ ++DEISM+SGE LD L I+ + H PFGG+Q+ F GDF QLPP+ + T + P+ +++ GL + + F NRG A + W LDL I L+K +RQ F+ LN++R G L + NQ F+ L + TT L+P N V++ N L +L S + HD V N D L + + LA ++LK A+VLL++NLDL G K L+NGS GVV +W + + + + G E G +A +R + EH+L++ +V + K ++PVVEF NGR+ I P L ++G G T R+Q+PL +G+A+SIHKSQGMTL V F GQ+YVALSRV L + L M IK+ +++N++ +D
Sbjct: 586 PSLTLDEDQLRCVRLTIVDEKNVFLTGSAGVGKSHTTATVRDFLKRLYEREDYPDRVVVAAPTGVAATHIDGTTINSATGVGIPSEVADFQRMM--KPAMYKLWTQDVELFMVDEISMVSGEFLDCLDSQIRLMCMNLPKNMGKKLHELPPFGGIQIFFCGDFLQLPPIEGSIPFETMKKLDPQ-----------------------------------QLKRGLAIEKYKNEKQEWTERSYFLNRGFAFSASTWGRLDLVTITLSKCYRQLGQQLFVHHLNQIRNGRADQRTLDYFNQ------FRTPLPDHR---------------------------------------------------LPTT--------------------------------------------------LFPFNKKVQQLNSTKLASLCSQAMTFHAHDHVNGLNN-----------------CHDETALWESELFKGGSLAERALQLKTNARVLLIRNLDLKGTDKLKPLINGSSGVVTNWTSKVEAEQTVQHRMNYLSTRVEALHSALGHGEYSRG---SRACEISDERACEVEHELLQ----IVAAKY---KWKLPVVEFNNGRQMIILPCLFRNEVMGQGMTYRLQIPLKLGWAVSIHKSQGMTLTAGNVSTAGAFAEGQSYVALSRVTGPEALYMIDMLTMKDIKMPRQPVIYNQIMAQLD 1130
BLAST of NO15G02000 vs. NCBI_GenBank
Match: PRW56986.1 (DNA helicase ATP-dependent [Chlorella sorokiniana]) HSP 1 Score: 203.0 bits (515), Expect = 4.300e-48 Identity = 178/684 (26.02%), Postives = 278/684 (40.64%), Query Frame = 0
Query: 163 ALEEVVIRRNNVFLTGSGGVGKSYVTTLFIQLFKEHYGAEYGKKVCVTASTGIASTQLNGTTLHTATGVGVPRCWDNFGRMFGHDKNVEHRWSKSYEVLIIDEISMLSGEMLDALSYTIQRIRHNASPFGGLQVIFIGDFAQLPPVPEDPTYTTNDFVRPEDWYFPRHHEFWHMPVXXXXXXXXXXXXXXXXXXYCRMREGLNPQPRQEVLFSNRGLALQSEVWWNLDLRIIELTKVFRQDDVHFIATLNRMRKGETTHEDLHWLNQEFYYAPFQKDLTQQKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQMLESGMEEEVYTPNQTTREQSQSPISTFVAIETGGDEGAADSVTGAGTGRCEEAATRATLSKSSALHLYPKNVLVERRNKLMLDALDSPLEEYDTHDFVWHENTGAILRRGQSPNAFDGRVRRDLQLLLANHTYYKTCLAAERVELKLGAKVLLLKNLDLVGPKKLVNGSVGVVVSWAPLDDPCLDLDMEEEVTGKGKKGGNGGAGTEEQMEGLTSRKASPSPTKRRRDKEHDLIEYKEKVVNEWFEANKRRIPVVEFTNGRKKAIYPELLSENIVGVGSTCRIQLPLMIGFAISIHKSQGMTLQEALVDVQECFDGGQTYVALSRVGPRLGLRLARRLGMDSIKVNPTFLLWNR-LRNAMDHR 846
A+ E+V +VF TG G GKS++ I ++ YG ++G V VTA+TGIA+ Q+ G+TLH+ G GV R D+F RM+ + ++ +VL+IDEISM+S E + + IR +PFGGLQ++ GDF QLPP+ TT W + + F NRG Q W +L LTKV+RQ D F++ LN +R G+ + Q +Q + P++ E + T L+ +N V+R N L L + D V A + R R+ ++ L H +++ C+A + +LK GA+V+L+KNL+L G LVNGS GVV + + DL + + K G+G + L S + + + + +++ +W + RIPVV F +GR+ + P + S + GVGS R Q+PL + +AI++HKSQG+TL A V +++CF GQ YVALSRV GL++ + +K +P + +++ LR D++
Sbjct: 67 AVLELVKAGKSVFFTGDAGTGKSFLLNRVIAELRDEYGEDFGSAVGVTAATGIAAVQIAGSTLHSCMGCGVARTVDDFQRMWKRKAAL-----RALKVLVIDEISMISAEFFHMIEAMCRSIRGLDAPFGGLQLVLCGDFFQLPPI------TTR----------------WTPSL-------------------------------PKATFLNRGFCFQCPAWHRCNLECRVLTKVWRQSDQTFVSILNAVRFGDN--------------------------------------------------------------------------SAAQRLFQQCRRPLA-------------------------ERDGIKPT-------QLFSRNADVDRVNAQELAQLPGSPQLCQAQDTV---EVAAPADEEEQRQGLSHRQRQQMEQRLWQHEFFRDCMAGKETQLKAGAQVMLVKNLELGGSHMLVNGSRGVVTRFMTRAEYEADLRSQLAAAKRALKRGSG--------DPLLSXXXXXXXXXXXAGMQMERVSRQLQLLGKWGGPDS-RIPVVRFLHGREVPMGPTVFSAELAGVGSCTRTQIPLKLAWAITVHKSQGLTLDLARVSLKDCFAEGQAYVALSRVRSLEGLQVL-DISSTCVKTSPVVMRFHQALRAGQDYQ 573
BLAST of NO15G02000 vs. NCBI_GenBank
Match: GAX73971.1 (hypothetical protein CEUSTIGMA_g1421.t1 [Chlamydomonas eustigma]) HSP 1 Score: 195.3 bits (495), Expect = 8.900e-46 Identity = 179/688 (26.02%), Postives = 272/688 (39.53%), Query Frame = 0
Query: 144 DAQLARLCPGLKLDVLQRRALEEVVIRRNNVFLTGSGGVGKSYVTTLFIQLFKEHYGAEYGKKVCVTASTGIASTQLNGTTLHTATGVGVPRCWDNFGRMFGHDKNVEHRWSKSYEVLIIDEISMLSGEMLDALSYTIQRIRHNASPFGGLQVIFIGDFAQLPPVPEDPTYTTNDFVRPEDWYFPRHHEFWHMPVXXXXXXXXXXXXXXXXXXYCRMREGLNPQPRQEVLFSNRGLALQSEVWWNLDLRIIELTKVFRQDDVHFIATLNRMRKGETTHEDLHWLNQEFYYAPFQKDLTQQKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQMLESGMEEEVYTPNQTTREQSQSPISTFVAIETGGDEGAADSVTGAGTGRCEEAATRATLSKS--SALHLYPKNVLVERRNKLMLDALDSPLEEYDTHDFVWHENTGAILRRGQSPNAFDGRVRRDLQLLLANHTYYKTCLAAERVELKLGAKVLLLKNLDLVG----PKKLVNGSVGVVVSWAPLDDPCLDLDMEEEVTGKGKKGGNGGAGTEEQMEGLTSRKASPSPTKRRRDKEHDLIEYKEKVVNEWFEANKRRIPVVEFTNGRKKAIYPELLSENIVGVGSTCRIQLPLMIGFAISIHKSQGMTLQEALVDVQECFDGGQTYVALSRVGPRLGLRLARRLGMDS 826
+A +LCP ++ + ++V NVF TG+ G GK+++ I+ + YG ++ KV + A TGIA+T + GTTL+ A G+G+ + +FG MF K R S+ YE+LI+DE+SMLS E+ + + ++R+R++ P GGLQ+I GDF QLPPV + T P D +F N G A Q+ W ++ + LTKVFRQ D FI L+ +R G H+ A R E R LS + A L+ +N V+ N L L + D V +L D +R+ L + +++ CLAA+ + +K+GA+VLL+KNLDL G ++LVNGS GV+ S P D L+ + G G N ++ K T+ + + K +++ W IPVV F NG + + P + S + G R+Q+PL + +A++IHK QG+TL V +++CF GQ YVALSR GL++ L +DS
Sbjct: 129 EASSPQLCP-------EQEKVMQLVRDGKNVFFTGNAGTGKTFMLNKIIEELRIKYGRDFISKVALAAPTGIAATHIQGTTLNAALGLGICNYYKDFGSMF--KKETRARISR-YEILIVDEVSMLSAELFNTIESNLKRLRNDVRPAGGLQLIMCGDFFQLPPVTKKWTPG-----MPSD------------------------------------------------MFLNWGYAFQAPAWKAANIEHVLLTKVFRQQDGEFIKILDNIRYG---HD-------------------------------------------------------------------------------------------------------IPAALKRLRELCMRPLLSSNGIKATQLFSRNKEVDETNIRELAVLKGATAVFGAEDEV-------VLDPALQGTHVDPTWQREATSRLEKNEFFRDCLAAKEIRMKVGAQVLLIKNLDLEGGPNNSRQLVNGSRGVITSMVPKADVIRGLEANRKALG----GDN----------NISMSKMDSKGTQLVTE-----VHKKVEMLRGWAGT---EIPVVRFRNGAEIQVLPTIFSSTVPHTGECRRVQIPLKLAWALTIHKCQGLTLDLVQVSLKDCFAQGQAYVALSRARSLEGLQI---LDLDS 615
BLAST of NO15G02000 vs. NCBI_GenBank
Match: XP_024403996.1 (ATP-dependent DNA helicase PIF1-like [Physcomitrella patens] >XP_024403997.1 ATP-dependent DNA helicase PIF1-like [Physcomitrella patens] >PNR33886.1 hypothetical protein PHYPA_023702 [Physcomitrella patens]) HSP 1 Score: 186.0 bits (471), Expect = 5.400e-43 Identity = 190/701 (27.10%), Postives = 274/701 (39.09%), Query Frame = 0
Query: 160 QRRALEEVVIRRNNVFLTGSGGVGKSYVTTLFIQLFKEHYGAEYGK-------------KVCVTASTGIASTQLNGTTLHTATGVGVPRCWDNFGRMFGHDKNVEHRWSKSYEVLIIDEISMLSGEMLDALSYTIQRIRHNAS-----PFGGLQVIFIGDFAQLPPVPEDPTYTTNDFVRPEDWYFPRHHEFWHMPVXXXXXXXXXXXXXXXXXXYCRMREGLNPQPRQEVLFSNRGLALQSEVWWNLDLRIIELTKVFRQDDVHFIATLNRMRKGETTHEDLHWLNQEFYYAPFQKDLTQQKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQMLESGMEEEVYTPNQTTREQSQSPISTFVAIETGGDEGAADSVTGAGTGRCEEAATRATLSKSSALHLYPKNVLVERRNKLMLDALDSPLEEYDTHDFVWHENTGAILRRGQSPNAFDGRVRRDLQLLLANHTYYKTCLAAERVELKLGAKVLLLKNLDLVGPKK-LVNGSVGVVVSWAPLDDPCLDLDMEEEVTGKGKKGGNGGAGTEEQMEGLTSRKASPSPTKRRRDKEHDLIEYKEKVVNEWFEANKRRIPVVEFTNGRKKAIYPELLSENIVGVGSTCRIQLPLMIGFAISIHKSQGMTLQEALVDVQECFDGGQTYVALSRVGPRLGLRLARRLGMDSIKVNPTFLLWNRLRNA 842
Q+R + ++V + NVF +GSGG GKS V + + K+ + E+ KV +TA TGIA+ + GTT+H ATG+G+PR +F RM+ + V+ RW ++ V IIDEISM+S E+L++L I+RIR A PFGGLQVIF GDF QL PV E T+T++D F NRGLA ++ W L + L VFRQ D F+ LN +R GE N E+ S + +E G LY KN V++ N D L E+ H T L++ ++ N +++ L + ++K C A + + LK+GA+V+L++NL L G + LVNGS GVVV WA D EE L S++ +P + +D + K N IP+V F NGR+ PE S I+ G R Q+PL + +AI+IHK QGM+L V +++ F GQ YVALSR GL++ ++V+P + + R A
Sbjct: 127 QQRLVIDLVQKGKNVFYSGSGGTGKSLVLHHIVGILKDRFRDEHNDRLAQGSSCGCCACKVAITAPTGIAAIPIGGTTVHRATGIGIPRRRQDFNRMW--NAPVKRRW-RNMSVWIIDEISMVSAELLESLEQMIRRIRTPADLLPGVPFGGLQVIFSGDFFQLQPVLEKITHTSDD------------------------------------------------------QFLNRGLAFEAPAWTRAKLTPVILQHVFRQSDGDFVDLLNGIRTGE-----------------------------------------------------------------------------NPAALEEIAKRCSRPLPMEAG----------------------------ILPTVLYSKNADVDKYNH---DRLRELPEQEVVLVAEEHIYTNEGLKKEEARNL---ALQQAQFNQLRDAEFWKLCTALKELSLKVGAQVMLVRNLTLTGKESDLVNGSRGVVVGWAFRD-----------------------VILEECRAVLRSKQYPETPKEVEAQLMYD--KLKATCFN--------LIPIVRFRNGREIYCVPERFSYEILNTGECVRWQVPLKLAWAITIHKCQGMSLDYVQVTLKDIFAEGQVYVALSRARSMEGLQVIGNPSRGDVRVSPKVMEFYRALTA 626
BLAST of NO15G02000 vs. NCBI_GenBank
Match: PSC73766.1 (DNA helicase ATP-dependent [Micractinium conductrix]) HSP 1 Score: 175.6 bits (444), Expect = 7.300e-40 Identity = 174/664 (26.20%), Postives = 261/664 (39.31%), Query Frame = 0
Query: 160 QRRALEEVVIRRNNVFLTGSGGVGKSYVTTLFIQLFKEHYG----AEYGKKVCVTASTGIASTQLNGTTLHTATGVGVPRCWDNFGRMFGHDKNVEHRWSKSYEVLIIDEISMLSGEMLDALSYTIQRIRHNASPFGGLQVIFIGDFAQLPPVPEDPTYTTNDFVRPEDWYFPRHHEFWHMPVXXXXXXXXXXXXXXXXXXYCRMREGLNPQPRQEVLFSNRGLALQSEVWWNLDLRIIELTKVFRQDDVHFIATLNRMRKGETTHEDLHWLNQEFYYAPFQKDLTQQKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQMLESGMEEEVYTPNQTTREQSQSPISTFVAIETGGDEGAADSVTGAGTGRCEEAATRATLSKSSALHLYPKNVLVERRNKLMLDALDSPLEEYDTHDFVWHENTGAILRRGQSPNAFDGRVRRDLQLLLANHTYYKTCLAAERVELKLGAKVLLLKNLDLVGPKK-LVNGSVGVVVSWAPLDDPCLDLDMEEEVTGKGKKGGNGGAGTEEQMEGLTSRKASPSPTKRRRDKEHDLIEYKEKVVNEWF-EANKRRIPVVEFTNGRKKAIYPELLSENIVGVGSTCRIQLPLMIGFAISIHKSQGMTLQEALVDVQECFDGGQTYVALSRVGPRLGLRL 818
++ A+ E+V RR +VF TG G GKS++ I ++ +G A K + A L LH R +N EH ++ +VLI+DEISM+S E + L + IR +PFGGL+++ GDF QLPP+ + R R L F NRG A QS W DL+ + LTKV+RQ D +F++ LN +R G+ + ++ +A E G + V LY +N V+R N L L ++ D V + + RG S + RD Q L +++ CLAA +LK+GA+V+L+KNL+L G + LVNGS GVV + PL + +L+ E+ + GAG + KA+ + T+ + + K+ ++N W ++ +PVV F NGR+ + PE + I GVGS R Q+PL + +A+++HKSQGMTL A V +++CF GQ YVALSRV GL++
Sbjct: 124 EQAAVLELVRRRQSVFFTGDAGTGKSFLLNHIIDALRQEFGHSCHAHRRKHAALCAG-------LRRAALHRRL------------REDWKKENKEH--LRALQVLIVDEISMVSAEFFELLEQMTRAIRGLPAPFGGLRLVLCGDFFQLPPISD------------------------------------------------RWRANL-----PHNTFLNRGFAFQSPAWRRCDLQCVVLTKVWRQRDPYFLSVLNAVRFGD--------------------------------------------------------------------------------------NAVAAALARECGAPLPEREGV--------------------KPTQLYSRNADVDRVNAEELARLPGSALDFGAKDDVILDPDNVM--RGMSAQ----ELSRDTQ-RLEKSEFFRDCLAARCFQLKVGAQVMLVKNLELSGSSRMLVNGSRGVVTRFMPLAEYKAELEQEKADARAQMRREGRGAGPAGLLALSREHKATSAGTR------FEKLLRKQALLNSWVDQSGAAAVPVVRFLNGRELPMGPEAFTAEIPGVGSCSREQVPLKLAWAVTVHKSQGMTLDLARVSLKDCFAEGQAYVALSRVRSLEGLQV 594
BLAST of NO15G02000 vs. NCBI_GenBank
Match: PNH01360.1 (ATP-dependent DNA helicase PIF1 [Tetrabaena socialis]) HSP 1 Score: 175.3 bits (443), Expect = 9.500e-40 Identity = 175/668 (26.20%), Postives = 253/668 (37.87%), Query Frame = 0
Query: 156 LDVLQRRALEEVVIRRNNVFLTGSGGVGKSYVTTLFIQLFKEHYGAEYGKKVCVTASTGIASTQLNGTTLHTATGVGVPRCWDNFGRMFGHDKNVEHRWSKSYEVLIIDEISMLSGEMLDALSYTIQRIRHNASPFGGLQVIFIGDFAQLPPVPEDPTYTTNDFVRPEDWYFPRHHEFWHMPVXXXXXXXXXXXXXXXXXXYCRMREGLNPQPRQEVLFSNRGLALQSEVWWNL--DLRIIELTKVFRQDDVHFIATLNRMRKGETTHEDLHWLNQEFYYAPFQKDLTQQKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQMLESGMEEEVYTPNQTTREQSQSPISTFVAIETGGDEGAADSVTGAGTGRCEEAATRATLSKSSALHLYPKNVLVERRNKLMLDALDSPLEEYDTHDFVWHENTGAILRRGQSPNAFDGRVRRDLQLLLANHTYYKTCLAAERVELKLGAKVLLLKNLDLVGPKKLVNGSVGVVVSWA----PLDDPCLDLDMEEEVTGKGKKGGNGGAGTEEQMEGLTSRKASPSPTKRRRDKEHDLIEYKEKVVNEWFEANKRRIPVVEFTNGRKKAIYPELLSENIVGVGSTCRIQLPLMIGFAISIHKSQGMTLQEALVDVQECFDGGQTYVALSRVGPRLGLRL 818
LD +Q+ ++ V+R +VF TGS G GK+++ +Q KE +G YG++V VTA TGIA+T + GTT + A G+G P + +F M H K+V R Y VL++DE SM+SGEM + + ++ IR N+ P GGLQ+I GDF QLPP+ + + P Q F+N G A Q+ W + + I LT++FRQ D F A LN +R GE EG +T C T A K + ++ +N V+R N L AL ++ + D L+ G + + ++D + + C+AA + LK GA+V+LLKNLD +G LVNGS GVV + L C L T Q+ TS A P ++PVV F +G++ I P + ++ GV R Q+PL + + I+IHKSQG+TL A V + F GQ YVALSR + GL +
Sbjct: 2 LDAIQQEVTDK-VLRGESVFFTGSAGTGKTFLLNTILQCLKEKWGDLYGERVAVTAMTGIAATHIEGTTFNAAMGIGAPSRYRDFLTM--HRKDVRARIKAMY-VLVVDECSMMSGEMFAIVEFMLRTIRKNSRPAGGLQLILCGDFFQLPPI---------------------------------------------------TKISMADPPPQRDAFTNYGYAFQAPSWRQVFSEGNHIVLTRIFRQSDESFAAVLNSIRLGE----------------------------------------------------------------------------------------------------EG-VKQITARLVAECSREVTCAEGIKPT--QIFARNADVDRINMAELAALPGDAVQFRSVD-------EYALKAGVE----ESKTQKD---------FLRDCIAAHDISLKEGAQVMLLKNLDPMG--GLVNGSRGVVTGYVHASLALAAACAFL-------------------TPTQLAEATSVLAKGPP--------------------------GFKVPVVRFVSGKEFGILPAIFRHDVPGVVECKRTQIPLKLAWTITIHKSQGLTLDAAQVSLVGMFAPGQAYVALSRARSKEGLEI 444
BLAST of NO15G02000 vs. NCBI_GenBank
Match: PNH00917.1 (ATP-dependent DNA helicase PIF1 [Tetrabaena socialis]) HSP 1 Score: 174.9 bits (442), Expect = 1.200e-39 Identity = 175/668 (26.20%), Postives = 248/668 (37.13%), Query Frame = 0
Query: 156 LDVLQRRALEEVVIRRNNVFLTGSGGVGKSYVTTLFIQLFKEHYGAEYGKKVCVTASTGIASTQLNGTTLHTATGVGVPRCWDNFGRMFGHDKNVEHRWSKSYEVLIIDEISMLSGEMLDALSYTIQRIRHNASPFGGLQVIFIGDFAQLPPVPEDPTYTTNDFVRPEDWYFPRHHEFWHMPVXXXXXXXXXXXXXXXXXXYCRMREGLNPQPRQEVLFSNRGLALQSEVWWNL--DLRIIELTKVFRQDDVHFIATLNRMRKGETTHEDLHWLNQEFYYAPFQKDLTQQKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQMLESGMEEEVYTPNQTTREQSQSPISTFVAIETGGDEGAADSVTGAGTGRCEEAATRATLSKSSALHLYPKNVLVERRNKLMLDALDSPLEEYDTHDFVWHENTGAILRRGQSPNAFDGRVRRDLQLLLANHTYYKTCLAAERVELKLGAKVLLLKNLDLVGPKKLVNGSVGVVVSWA----PLDDPCLDLDMEEEVTGKGKKGGNGGAGTEEQMEGLTSRKASPSPTKRRRDKEHDLIEYKEKVVNEWFEANKRRIPVVEFTNGRKKAIYPELLSENIVGVGSTCRIQLPLMIGFAISIHKSQGMTLQEALVDVQECFDGGQTYVALSRVGPRLGLRL 818
LD +Q+ +++ V+R +VF TGS G GK+++ +Q KE +G YG++V VTA TGIA+T + GTT + A G+G P + +F M H K+V R K+ VL++DE SM+SGE+ + + ++ IR N P GGLQ+I GDF QLPP+ + + P Q F+N G A Q+ W + + I LT++FRQ D F A LN +R GE EG +T C T A K + ++ +N V+R N L AL A+ R AF V + + C+AA + LK GA+V+LLKNLD +G LVNGS GVV + L C L T Q+ TS A P ++PVV F +G++ I P + ++ GV R Q+PL + + I+IHKSQG+TL A V + F GQ YVALSR + GL +
Sbjct: 2 LDAVQQEVIDK-VLRGESVFFTGSAGTGKTFLLNTILQCLKEKWGDLYGERVAVTAMTGIAATHIEGTTFNAAMGIGAPSRYRDFLTM--HRKDVRAR-IKALHVLVVDECSMMSGELFAIVEFMLRTIRKNMRPAGGLQLILCGDFFQLPPI---------------------------------------------------TKISMADPPPQRDAFTNYGYAFQAPSWRQVFSEGNHIVLTRIFRQSDESFAAVLNSIRLGE----------------------------------------------------------------------------------------------------EG-VKQITARLVAECSREVTCAEGIKPT--QIFARNADVDRINMAELAALPG----------------DAVQFRSVDEYAFKAGVEES----KTQKDFLRDCIAAHDISLKEGAQVMLLKNLDPMG--GLVNGSRGVVTGYVHASLALAAACAFL-------------------TPTQLAEATSVLAKGPP--------------------------GFKVPVVRFVSGKEFGILPAIFRHDVPGVVECKRTQIPLKLAWTITIHKSQGLTLDAAQVSLVGMFAPGQAYVALSRARSKEGLEI 444
BLAST of NO15G02000 vs. NCBI_GenBank
Match: PNH12573.1 (ATP-dependent DNA helicase PIF1 [Tetrabaena socialis]) HSP 1 Score: 174.5 bits (441), Expect = 1.600e-39 Identity = 173/667 (25.94%), Postives = 256/667 (38.38%), Query Frame = 0
Query: 154 LKLDVLQRRALEEVVIRRNNVFLTGSGGVGKSYVTTLFIQLFKEHYGAEYGKKVCVTASTGIASTQLNGTTLHTATGVGVPRCWDNFGRMFGHDKNVEHRWSKSYEVLIIDEISMLSGEMLDALSYTIQRIRHNASPFGGLQVIFIGDFAQLPPVPEDPTYTTNDFVRPEDWYFPRHHEFWHMPVXXXXXXXXXXXXXXXXXXYCRMREGLNPQPRQEVLFSNRGLALQSEVW---WNLDLRIIELTKVFRQDDVHFIATLNRMRKGETTHEDLHWLNQEFYYAPFQKDLTQQKEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLQMLESGMEEEVYTPNQTTREQSQSPISTFVAIETGGDEGAADSVTGAGTGRCEEAATRATLSKSSALHLYPKNVLVERRNKLMLDALDSPLEEYDTHDFVWHENTGAILRRGQSPNAFDGRVRRDLQLLLANHTYYKTCLAAERVELKLGAKVLLLKNLDLVGPKKLVNGSVGVVVSWAPLDDPCLDLDMEEEVTGKGKKGGNGGAGTEEQMEGLTSRKASPSPTKRRRDKEHDLIEYKEKVVNEWFEANKRRIPVVEFTNGRKKAIYPELLSENIVGVGSTCRIQLPLMIGFAISIHKSQGMTLQEALVDVQECFDGGQTYVALSRVGPRLGLRL 818
+ LD Q+ +++ V+R +VF TGS G GK+++ + + KE +GA +G V V A TGIA+T + GTTL+ A G+G P + +F M H +V R K ++VL+IDE SM+S EM + + + + IR + P GGLQ+I GDF QLPPV C++ P P ++SN G A Q+ W + ++ R+I LT++FRQ D F LN +R GE + + VT C A + A K + ++ +N V+R N L AL + D V R +RD ++K C+AA+++ LK GA+V+LLKNLD G LVNGS GVV G + + L K + T+ ++W+ N +PVV F +GR+ I P + + + G+ RIQ+PL + + I+IHKSQG+TL A V + F GQ YVALSR + GL +
Sbjct: 4 MALDPAQQLVVDK-VMRGESVFFTGSAGTGKTFLLNTILNMLKEKWGASFGDHVAVAAMTGIAATHIEGTTLNAAIGIGAPSRYRDFKTM--HRPDVRAR-IKGWDVLVIDECSMMSAEMFEIIEHMFRVIRRSQRPAGGLQLILCGDFFQLPPV-------------------------------------------------CKVSMADAPPPMD--VYSNYGYAFQAPAWQRVFTIENRVI-LTQIFRQSDATFAGMLNCIRVGEGSRQ------------------------------------------------------------------------------------------------------VTARLVSECGRAISCAEGIKPT--QIFARNADVDRINMAELVALPGQSVLCASIDEVIFTTEADAATR-----------KRD---------FFKDCIAAQQLSLKEGAQVMLLKNLDPAG--GLVNGSRGVV------------------------------TGFQHKSVALARAKEFMTVTQ---------FAEATTAASKWWGQN---VPVVRFVSGREFGILPAIFRQEVSGLAECKRIQMPLKLAWTITIHKSQGLTLDAAQVSLTGMFAPGQAYVALSRARSKEGLEI 446 The following BLAST results are available for this feature:
BLAST of NO15G02000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G02000 ID=NO15G02000|Name=NO15G02000|organism=Nannochloropsis oceanica|type=gene|length=2907bpback to top protein sequence of NO15G02000.1 >NO15G02000.1-protein ID=NO15G02000.1-protein|Name=NO15G02000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=969bpback to top Synonyms
Publications
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