NO15G01970, NO15G01970 (gene) Nannochloropsis oceanica

Overview
NameNO15G01970
Unique NameNO15G01970
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2643
Alignment locationchr15:551625..554267 +

Link to JBrowse

Properties
Property NameValue
DescriptionCirhin
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:551625..554267 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR001680WD40_repeat
Homology
BLAST of NO15G01970 vs. NCBI_GenBank
Match: EWM22410.1 (cirhin [Nannochloropsis gaditana])

HSP 1 Score: 939.9 bits (2428), Expect = 5.800e-270
Identity = 503/894 (56.26%), Postives = 601/894 (67.23%), Query Frame = 0
Query:    3 GRA--TPAGSSE--------ADATEQHLLSIHRCRFLNWEPQAVVCMAVSASGQLLAVARESGSVEIRLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVGTLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKLFSTADDALEFSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIFVGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGDSLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCLKRQPSSXXXXXXXXXXXXXXXSNGTWVATASNRAHSHDVRALALVRKSSGRQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLASRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELIICSTLSSNGRFLAYATGEELRVFEVEMEKEE----EDESGRE--ERGRVNLQRWKPSALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRLDLPVAVVEEARDDATSAGAEGRCVVRLSCSQDGRSVAVGRWNGEVEIYSILSGEXXXXXXXXXXXXXXXXXXEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRFYLFDIEAQQLTGWSKDFGHRLPKELLDRHDCVLGICFNPDSSNALILHGFGFVCYVDLDRPMGRHVQLLPRTHPAALAQREGIRKRNPPWLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKLARRPANVEEKEDAWNFMLHLGYQGVLAVLALGRDELLVVEEPWIKIVSKLPDVLHRQRYGT 881
            GRA  TP G  E        A   +QHLL IHRCRFL+WEP+A+VCMA  ASG++LAVARESG VEIRLV EKFRV G+VP+PG  GLIR++ WS  V +++ RLFVG+LDT + EIDV G+RV+ R+DSYGG VWCLA  P +DLLAVGCEDGSVKLFSTAD   EFSRALPTVN+R+LS+AWQ  P           S R  P +FVGA+DGTIRHLDA TGHSAYRMTVEA+NS HP ++W L +L DGTLVSGDSLG +HFWDGA+G LKQSF+VHEAD+LAL A   G+TVFASGVDSKLVCL+R PS                 +  WV  ASNRAHSHD+RALA+V +S GR  GG GR+S LLVSGG DTKLCTYSV +FA  RPRYIAPYPY+P+AS+AS    RLL+MQH RKL LW LG  ++ETA  L+HEPSP+LEIQA KG+LI+ S+LS +GRFLAYAT   LRV  +E+ + E    E + G +   R RV L+R K  AL   G  K + AL F PDS++LV+GTGGGRV  LR  L  ++VEEA  D +    E + VVRLSCSQDGR +AVGRWNG+VE+Y++ +                    E    L+L+WRLPRLDSAPTALA+HPE D+LV+ACVSNRFY+FD   Q+LT WS+D GHRLP+ELLDRHDC++G+CFNPDS  A++L+GFGFVCYVDL RP G+ VQ+LP +HPAALAQR   RKR   WL                                                                            +L  +    ++  D+WNF +HLGYQGV+AV ALG DELL+VEEPWIKIVSKLPDVLHR RYGT
Sbjct:   42 GRAAMTPRGEEEDIEGRQLMAKRRDQHLLYIHRCRFLDWEPRAIVCMAACASGRMLAVARESGEVEIRLVDEKFRVAGVVPVPGGNGLIRSMTWSRQVSESQGRLFVGSLDTSVFEIDVPGLRVRRRQDSYGGPVWCLAADPHRDLLAVGCEDGSVKLFSTADQGFEFSRALPTVNSRILSMAWQAPP-----------SPRDSPSLFVGAVDGTIRHLDARTGHSAYRMTVEAKNSAHPPLVWSLLALSDGTLVSGDSLGAVHFWDGAMGALKQSFWVHEADVLALAASAAGDTVFASGVDSKLVCLRR-PSQ-----AGAREPPGAPEDEAWVLAASNRAHSHDLRALAVVERSGGR--GGEGRRSSLLVSGGVDTKLCTYSVASFAHNRPRYIAPYPYYPVASVASARGRRLLMMQHSRKLQLWGLGGFQEETALCLQHEPSPLLEIQAVKGQLIVSSSLSPDGRFLAYATTGTLRVLALEVGESEGGGAEVDRGGDGHARPRVLLRRNKLPALAGRGGEKDVKALCFSPDSRSLVVGTGGGRV--LRAGLKGSLVEEAIRDTSLESEEEQGVVRLSCSQDGRLLAVGRWNGDVELYAVPASS----------------SGEDTGSLSLTWRLPRLDSAPTALAFHPETDILVVACVSNRFYVFDAAGQRLTDWSQDMGHRLPRELLDRHDCIVGVCFNPDSPQAVVLYGFGFVCYVDLGRPPGQLVQILPASHPAALAQRASTRKRQHEWL--------------PTRKQKKQRGEAEIAQVSSNKVIQAIEDNDMGGTHGRRRSRGDSLVQEAEERSLPPGSDVSEQLNGKMVKEDDGNDSWNFKMHLGYQGVVAVEALGPDELLLVEEPWIKIVSKLPDVLHRHRYGT 884          
BLAST of NO15G01970 vs. NCBI_GenBank
Match: OQS02331.1 (U3 small nucleolar RNA-associated protein [Thraustotheca clavata])

HSP 1 Score: 330.5 bits (846), Expect = 1.600e-86
Identity = 221/702 (31.48%), Postives = 337/702 (48.01%), Query Frame = 0
Query:   23 IHRCRFLNWEPQAVVCMAVSASGQLLAVARESGSVEIRLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVGTLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKLFS-TADDALEFSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIFVGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGDSLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCLKRQPSSXXXXXXXXXXXXXXXSNGTWVATASNRAHSHDVRALALVRKSSGRQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLASRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELIICSTLSSNGRFLAYATGEELRVFEVEMEKEEEDESGREERGRVNLQRWKPSALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRLDLPVAVVEEARDDATSAGAEGRCVVRLSCSQDGRSVAVGRWNGEVEIYSILSGEXXXXXXXXXXXXXXXXXXEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRFYLFDIEAQQLTGWSKDFGHRLPKELLDRHDCVLGICFNPDSSNALILHGFGFVCYVDLDRPM-GRHVQLLPRT 723
            +HRCRFL +EP  +  +A + +G  LAVAR++G VE+  V E+      V     + +I ++ W+    D+  RLFV +LD  I EID+  +R  +   + GG +WC+      ++LAVGCEDG ++LF+   D+ L F +     N RV+SLAW                  +   +F G  +G I H +  TG +  RMT+E  +   PA++W L  L D T++SGDS GN+H WDG  GTL Q+F    AD+L +        +FASG+D++++ L+R P++                   W    S+RAH+HDVRALA+ R               LLVSGG DT L TY  + F  +RP  I+P P     +LAS+   RLLL+QH   L +W L    +E+  +L H     + +Q      I+   +S NG F+A +T  EL+VF ++                      K  AL  + V     +L F  DS  L+ G    RV+ +     +  +       T           L  S DG+ VA G     + ++++                           + L    PR +   +ALA+HP   +LV+  VSN F  +D+E + LT WS++  H+LPKEL  R   ++G+ F+P   N+++L    F+ ++D+D+P+ G+HV    RT
Sbjct:   32 VHRCRFLKYEPSTITTVAFNVAGDKLAVARQNGDVELWNVHERECYFDAVVGGRSSAVISSVQWT----DSN-RLFVASLDGTIREIDLDSLRFVNSLHANGGPIWCMQYHSIDNMLAVGCEDGRIRLFTMDEDEPLYFHKVFGGTNRRVISLAWH----------------ARTDTLFSGNDEGVIYHWNTKTGRNESRMTLERFSKQDPAVVWTLNVLDDMTVLSGDSNGNVHTWDGITGTLMQTFAQLTADVLTMAVNTTETLLFASGIDNQVIQLRRSPTTK-----------------LWSYAYSHRAHTHDVRALAVSR----------NEDEPLLVSGGVDTHLVTYPSSKFHIVRPNKISPIPPRQFIALASQ--KRLLLVQHSNSLDVWTLA---NESPKLLAH-----INVQGTYN--IVSCAISPNGEFIACSTAAELKVFHLQGTS------------------IKKVALS-SSVSNPAYSLLFTADSAHLITGDTALRVIDMTTLSLIKTLATPHQLQTKT---------LCVSNDGQWVACGDIGNNISVFNL-------------------------DAMLLYAEFPRPNDMHSALAFHPSGKILVVTTVSNNFACYDVERKSLTDWSRENAHKLPKELFLRQSSLMGVLFHPTQPNSIVLWSQRFLLHIDIDQPIGGQHVTKRRRT 620          
BLAST of NO15G01970 vs. NCBI_GenBank
Match: OWZ19797.1 (U3 small nucleolar RNA-associated protein [Phytophthora megakarya])

HSP 1 Score: 328.6 bits (841), Expect = 6.100e-86
Identity = 242/733 (33.02%), Postives = 353/733 (48.16%), Query Frame = 0
Query:    8 AGSSEADATEQHLLSIHRCRFLNWEPQAVVCMAVSASGQLLAVARESGSVEIRLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVGTLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKLFSTADDALEFSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIFVGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGDSLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCLKRQPSSXXXXXXXXXXXXXXXSNGTWVATASNRAHSHDVRALALVRKSSGRQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLASRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELIICSTLSSNGRFLAYATGEELRVFEVEMEKEEEDESGREERGRVNLQRWKPSALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRLD----------LPVAVVEEARDDATSAGAEGRCVVRLSCSQDGRSVAVGRWNGEVEIYSILSGEXXXXXXXXXXXXXXXXXXEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRFYLFDIEAQQLTGWSKDFGHRLPKELLDRHDCVLGICFNPDSSNALILHGFGFVCYVDLDRPMGRHVQLLPRTHPAALAQR 731
            A   +AD +    L +HRCRF++W P AV  ++ SASG  LAVAR +G VE+  V  K+  + +V        I AL WS        RLF  +LD  + EID   +  KH  DS GG +W + +  +   LAVGCEDG ++LFS ADD L FS+A  T  +RV+SLAW             A+       IF G+  G I   DA+TG +  R+T++   + H A++W L  L D TLVSGDS GN+ FW+   GTL Q F    ADILA+       T+FASGVD+++V  +R  +                 N TW  + S+R HSHDVRALAL   SS +          +LVSGG DT+L  Y  N F   RP  I   PY  L S+A  +  R+L++Q    L LW L AT+      +  +   +LE+   K   + CS L+ N  FLA +  EEL++FE++              G  + Q  K + L R  V +    LAF PDS  LV+ +   ++  L L           + VA  +E  D+  S       +V LS S DG+ +A G  +  + IY++ S                         +    +LPR     T++ ++P    LV+  VSN F  +D+E + L+ W +    + PKEL++  + + G+ F+P + + L L+    +  ++    MG+ V    ++ P    +R
Sbjct:    6 AKKRKADESVVTTLQVHRCRFVDWMPAAVHALSFSASGDELAVARANGDVELWHVSSKWH-LQLVVSGSSQRSISALCWS-----ENRRLFASSLDGTLWEIDWETLSRKHVADSNGGPIWSMVLDSSSQQLAVGCEDGRIRLFSFADDQLHFSKAFLTTGSRVVSLAWH-----------GAAHK-----IFSGSEAGVIHCWDAVTGRNESRITLD-NLAKHKAIVWSLVVLDDLTLVSGDSTGNLSFWNAPTGTLLQKFSHLTADILAICVSKGNNTLFASGVDNQVVEFRRSVAE--------------SGNSTWAYSYSHRGHSHDVRALAL--SSSAKS---------VLVSGGIDTQLVWYHGNNFGAGRPAKIVSLPY--LHSIALANEMRVLMVQKSTSLDLWRL-ATQSAATGAITQKRKLLLELNVGKALNLSCSALAPNASFLACSNSEELKLFELD--------------GEQDFQPKKVTTLPR-NVARPARVLAFSPDSTRLVIASSSHQIRVLDLTKMEVLKTFKVVTVASTDEDSDNVPSP------LVSLSISSDGQWLATGDASNNIAIYNLDS-------------------------MQFYCQLPRPSEMHTSIGFNPSGKTLVVTLVSNSFVCYDVETKGLSEWYRRNHEQFPKELVEGRN-IKGMTFDPANPDFLYLYSPVSLYQIN----MGKQVDGFAKSSPKKTRRR 636          
BLAST of NO15G01970 vs. NCBI_GenBank
Match: ETP52523.1 (hypothetical protein F442_02500 [Phytophthora parasitica P10297])

HSP 1 Score: 317.8 bits (813), Expect = 1.100e-82
Identity = 221/682 (32.40%), Postives = 329/682 (48.24%), Query Frame = 0
Query:   21 LSIHRCRFLNWEPQAVVCMAVSASGQLLAVARESGSVEIRLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVGTLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKLFSTADDALEFSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIFVGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGDSLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCLKRQPSSXXXXXXXXXXXXXXXSNGTWVATASNRAHSHDVRALALVRKSSGRQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLASRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELIICSTLSSNGRFLAYATGEELRVFEVEMEKEEEDESGREERGRVNLQRWKPSALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRLDLPVAVVEEARDDATSAGAEGRCV----VRLSCSQDGRSVAVGRWNGEVEIYSILSGEXXXXXXXXXXXXXXXXXXEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRFYLFDIEAQQLTGWSKDFGHRLPKELLDRHDCVLGICFNPDSSNALILH 699
            L +HRCRF++W P AV  +  +A+G  LAVAR +G VEI  V  K+  +  V        + AL W+ D      RLF  +LD  + E+D+  +  K+  DS GG +W + +      LAVGCEDG ++LFS AD  L FS++  T   RV+SLAW                  Q   IF G+ +G I   +A+TG +  R+T+E       +++W L  L D TLVSGDS GN+ FW+   GTL Q F    ADILA+       T+FASGVD+++V  +R  +                 N TW  + S+R HSHDVRALAL                 +LVSGG DT+L  Y  N+F   RP  IA  PY    +LA+    R+L++Q    L LW L AT+  T   +  +   +LE+   K   + CS L+ N  F+A +  +EL++FE+E E++               Q  K + L  + V+     LAF PDS  LV+ +   ++  L L     +     D   + G E   V    V L+ S DG+ +A G  +  + IY++ S                         +    +LPR     T+++++P    LV+  VSN F  +D+E + L+ W +    + PKEL++  + + G+ F+P + + L L+
Sbjct:   24 LQVHRCRFVDWMPSAVHALCFNAAGDQLAVARATGDVEIWSVSSKWH-LKFVLAGSAQSQVSALCWTPDSD----RLFASSLDGTLWELDLQSLCRKNVTDSNGGPIWSMVMNAETQQLAVGCEDGRIRLFSFADGQLYFSKSFLTTGGRVVSLAWH----------------SQAHKIFSGSENGIIHCWNAVTGRNESRITLETLTK-QKSVVWSLVVLDDLTLVSGDSAGNLSFWNAPTGTLLQKFSHLTADILAICVSQSNNTLFASGVDNQVVEFRRSVAD--------------SGNATWAYSYSHRGHSHDVRALAL-----------SANAKPVLVSGGIDTQLVWYRGNSFGASRPAKIASMPYRQSVALANE--KRVLMVQKSTSLDLWRL-ATQSATTGAITKKHKLLLELNVGKALNLSCSALAPNASFVACSNSKELKLFELETEQD--------------FQPKKVTTLPHS-VKGPARVLAFSPDSTRLVIASSSHQIRVLDLSKMEVLKTFEVDTPATTGEESASVPSPLVSLTISSDGQWLATGDASNNIAIYNLDS-------------------------MQFYCQLPRPSEMHTSMSFNPSGKTLVVTLVSNSFVCYDVETKGLSEWYRQNHEQFPKELVEGRN-LKGMAFDPANPDFLYLY 614          
BLAST of NO15G01970 vs. NCBI_GenBank
Match: ETI54734.1 (hypothetical protein F443_02529, partial [Phytophthora parasitica P1569] >ETK94599.1 hypothetical protein L915_02404, partial [Phytophthora parasitica] >ETL47974.1 hypothetical protein L916_02378, partial [Phytophthora parasitica] >ETM01085.1 hypothetical protein L917_02302, partial [Phytophthora parasitica] >ETM54261.1 hypothetical protein L914_02402, partial [Phytophthora parasitica])

HSP 1 Score: 316.6 bits (810), Expect = 2.400e-82
Identity = 220/682 (32.26%), Postives = 329/682 (48.24%), Query Frame = 0
Query:   21 LSIHRCRFLNWEPQAVVCMAVSASGQLLAVARESGSVEIRLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVGTLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKLFSTADDALEFSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIFVGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGDSLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCLKRQPSSXXXXXXXXXXXXXXXSNGTWVATASNRAHSHDVRALALVRKSSGRQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLASRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELIICSTLSSNGRFLAYATGEELRVFEVEMEKEEEDESGREERGRVNLQRWKPSALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRLDLPVAVVEEARDDATSAGAEGRCV----VRLSCSQDGRSVAVGRWNGEVEIYSILSGEXXXXXXXXXXXXXXXXXXEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRFYLFDIEAQQLTGWSKDFGHRLPKELLDRHDCVLGICFNPDSSNALILH 699
            L +HRCRF++W P AV  +  +A+G  LAVAR +G VEI  V  K+  +  V        + AL W+ D      RLF  +LD  + E+D+  +  K+  DS GG +W + +      LAVGCEDG ++LFS AD  L FS++  T   RV+SLAW                  Q   IF G+ +G I   +A+TG +  R+T+E       +++W L  L D TLVSGDS GN+ FW+   GTL Q F    ADILA+       T+FASGVD+++V  +R  +                 N TW  + S+R HSHDVRALAL                 +LVSGG DT+L  Y  N+F   RP  IA  PY    +LA+    R+L++Q    L LW L AT+  T   +  +   +LE+   K   + CS L+ N  F+A +  +EL++FE++ E++               Q  K + L  + V+     LAF PDS  LV+ +   ++  L L     +     D   + G E   V    V L+ S DG+ +A G  +  + IY++ S                         +    +LPR     T+++++P    LV+  VSN F  +D+E + L+ W +    + PKEL++  + + G+ F+P + + L L+
Sbjct:   50 LQVHRCRFVDWMPSAVHALCFNAAGDQLAVARATGDVEIWSVSSKWH-LKFVLAGSAQSQVSALCWTPDSD----RLFASSLDGTLWELDLQSLCRKNVTDSNGGPIWSMVMNAETQQLAVGCEDGRIRLFSFADGQLYFSKSFLTTGGRVVSLAWH----------------SQAHKIFSGSENGIIHCWNAVTGRNESRITLETLTK-QKSVVWSLVVLDDLTLVSGDSAGNLSFWNAPTGTLLQKFSHLTADILAICVSQSNNTLFASGVDNQVVEFRRSVAD--------------SGNATWAYSYSHRGHSHDVRALAL-----------SANAKPVLVSGGIDTQLVWYRGNSFGASRPAKIASMPYRQSVALANE--KRVLMVQKSTSLDLWRL-ATQSATTGAITKKHKLLLELNVGKALNLSCSALAPNASFVACSNSKELKLFELDTEQD--------------FQPKKVTTLPHS-VKGPARVLAFSPDSTRLVIASSSHQIRVLDLSKMEVLKTFEVDTPATTGEESASVPSPLVSLTISSDGQWLATGDASNNIAIYNLDS-------------------------MQFYCQLPRPSEMHTSMSFNPSGKTLVVTLVSNSFVCYDVETKGLSEWYRQNHEQFPKELVEGRN-LKGMAFDPANPDFLYLY 640          
BLAST of NO15G01970 vs. NCBI_GenBank
Match: XP_008899763.1 (hypothetical protein PPTG_07340 [Phytophthora parasitica INRA-310] >ETN15162.1 hypothetical protein PPTG_07340 [Phytophthora parasitica INRA-310] >KUF99867.1 hypothetical protein AM588_10010324 [Phytophthora nicotianae])

HSP 1 Score: 316.6 bits (810), Expect = 2.400e-82
Identity = 220/682 (32.26%), Postives = 329/682 (48.24%), Query Frame = 0
Query:   21 LSIHRCRFLNWEPQAVVCMAVSASGQLLAVARESGSVEIRLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVGTLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKLFSTADDALEFSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIFVGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGDSLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCLKRQPSSXXXXXXXXXXXXXXXSNGTWVATASNRAHSHDVRALALVRKSSGRQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLASRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELIICSTLSSNGRFLAYATGEELRVFEVEMEKEEEDESGREERGRVNLQRWKPSALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRLDLPVAVVEEARDDATSAGAEGRCV----VRLSCSQDGRSVAVGRWNGEVEIYSILSGEXXXXXXXXXXXXXXXXXXEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRFYLFDIEAQQLTGWSKDFGHRLPKELLDRHDCVLGICFNPDSSNALILH 699
            L +HRCRF++W P AV  +  +A+G  LAVAR +G VEI  V  K+  +  V        + AL W+ D      RLF  +LD  + E+D+  +  K+  DS GG +W + +      LAVGCEDG ++LFS AD  L FS++  T   RV+SLAW                  Q   IF G+ +G I   +A+TG +  R+T+E       +++W L  L D TLVSGDS GN+ FW+   GTL Q F    ADILA+       T+FASGVD+++V  +R  +                 N TW  + S+R HSHDVRALAL                 +LVSGG DT+L  Y  N+F   RP  IA  PY    +LA+    R+L++Q    L LW L AT+  T   +  +   +LE+   K   + CS L+ N  F+A +  +EL++FE++ E++               Q  K + L  + V+     LAF PDS  LV+ +   ++  L L     +     D   + G E   V    V L+ S DG+ +A G  +  + IY++ S                         +    +LPR     T+++++P    LV+  VSN F  +D+E + L+ W +    + PKEL++  + + G+ F+P + + L L+
Sbjct:   24 LQVHRCRFVDWMPSAVHALCFNAAGDQLAVARATGDVEIWSVSSKWH-LKFVLAGSAQSQVSALCWTPDSD----RLFASSLDGTLWELDLQSLCRKNVTDSNGGPIWSMVMNAETQQLAVGCEDGRIRLFSFADGQLYFSKSFLTTGGRVVSLAWH----------------SQAHKIFSGSENGIIHCWNAVTGRNESRITLETLTK-QKSVVWSLVVLDDLTLVSGDSAGNLSFWNAPTGTLLQKFSHLTADILAICVSQSNNTLFASGVDNQVVEFRRSVAD--------------SGNATWAYSYSHRGHSHDVRALAL-----------SANAKPVLVSGGIDTQLVWYRGNSFGASRPAKIASMPYRQSVALANE--KRVLMVQKSTSLDLWRL-ATQSATTGAITKKRKLLLELNVGKALNLSCSALAPNASFVACSNSKELKLFELDTEQD--------------FQPKKVTTLPHS-VKGPARVLAFSPDSTRLVIASSSHQIRVLDLSKMEVLKTFEVDTPATTGEESASVPSPLVSLTISSDGQWLATGDASNNIAIYNLDS-------------------------MQFYCQLPRPSEMHTSMSFNPSGKTLVVTLVSNSFVCYDVETKGLSEWYRQNHEQFPKELVEGRN-LKGMAFDPANPDFLYLY 614          
BLAST of NO15G01970 vs. NCBI_GenBank
Match: ETO83496.1 (hypothetical protein F444_02520 [Phytophthora parasitica P1976] >ETP24584.1 hypothetical protein F441_02469 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 316.6 bits (810), Expect = 2.400e-82
Identity = 220/682 (32.26%), Postives = 329/682 (48.24%), Query Frame = 0
Query:   21 LSIHRCRFLNWEPQAVVCMAVSASGQLLAVARESGSVEIRLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVGTLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKLFSTADDALEFSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIFVGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGDSLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCLKRQPSSXXXXXXXXXXXXXXXSNGTWVATASNRAHSHDVRALALVRKSSGRQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLASRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELIICSTLSSNGRFLAYATGEELRVFEVEMEKEEEDESGREERGRVNLQRWKPSALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRLDLPVAVVEEARDDATSAGAEGRCV----VRLSCSQDGRSVAVGRWNGEVEIYSILSGEXXXXXXXXXXXXXXXXXXEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRFYLFDIEAQQLTGWSKDFGHRLPKELLDRHDCVLGICFNPDSSNALILH 699
            L +HRCRF++W P AV  +  +A+G  LAVAR +G VEI  V  K+  +  V        + AL W+ D      RLF  +LD  + E+D+  +  K+  DS GG +W + +      LAVGCEDG ++LFS AD  L FS++  T   RV+SLAW                  Q   IF G+ +G I   +A+TG +  R+T+E       +++W L  L D TLVSGDS GN+ FW+   GTL Q F    ADILA+       T+FASGVD+++V  +R  +                 N TW  + S+R HSHDVRALAL                 +LVSGG DT+L  Y  N+F   RP  IA  PY    +LA+    R+L++Q    L LW L AT+  T   +  +   +LE+   K   + CS L+ N  F+A +  +EL++FE++ E++               Q  K + L  + V+     LAF PDS  LV+ +   ++  L L     +     D   + G E   V    V L+ S DG+ +A G  +  + IY++ S                         +    +LPR     T+++++P    LV+  VSN F  +D+E + L+ W +    + PKEL++  + + G+ F+P + + L L+
Sbjct:   24 LQVHRCRFVDWMPSAVHALCFNAAGDQLAVARATGDVEIWSVSSKWH-LKFVLAGSAQSQVSALCWTPDSD----RLFASSLDGTLWELDLQSLCRKNVTDSNGGPIWSMVMNAETQQLAVGCEDGRIRLFSFADGQLYFSKSFLTTGGRVVSLAWH----------------SQAHKIFSGSENGIIHCWNAVTGRNESRITLETLTK-QKSVVWSLVVLDDLTLVSGDSAGNLSFWNAPTGTLLQKFSHLTADILAICVSQSNNTLFASGVDNQVVEFRRSVAD--------------SGNATWAYSYSHRGHSHDVRALAL-----------SANAKPVLVSGGIDTQLVWYRGNSFGASRPAKIASMPYRQSVALANE--KRVLMVQKSTSLDLWRL-ATQSATTGAITKKHKLLLELNVGKALNLSCSALAPNASFVACSNSKELKLFELDTEQD--------------FQPKKVTTLPHS-VKGPARVLAFSPDSTRLVIASSSHQIRVLDLSKMEVLKTFEVDTPATTGEESASVPSPLVSLTISSDGQWLATGDASNNIAIYNLDS-------------------------MQFYCQLPRPSEMHTSMSFNPSGKTLVVTLVSNSFVCYDVETKGLSEWYRQNHEQFPKELVEGRN-LKGMAFDPANPDFLYLY 614          
BLAST of NO15G01970 vs. NCBI_GenBank
Match: KUF83201.1 (U3 small nucleolar RNA-associated protein 4 [Phytophthora nicotianae])

HSP 1 Score: 316.6 bits (810), Expect = 2.400e-82
Identity = 220/682 (32.26%), Postives = 329/682 (48.24%), Query Frame = 0
Query:   21 LSIHRCRFLNWEPQAVVCMAVSASGQLLAVARESGSVEIRLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVGTLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKLFSTADDALEFSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIFVGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGDSLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCLKRQPSSXXXXXXXXXXXXXXXSNGTWVATASNRAHSHDVRALALVRKSSGRQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLASRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELIICSTLSSNGRFLAYATGEELRVFEVEMEKEEEDESGREERGRVNLQRWKPSALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRLDLPVAVVEEARDDATSAGAEGRCV----VRLSCSQDGRSVAVGRWNGEVEIYSILSGEXXXXXXXXXXXXXXXXXXEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRFYLFDIEAQQLTGWSKDFGHRLPKELLDRHDCVLGICFNPDSSNALILH 699
            L +HRCRF++W P AV  +  +A+G  LAVAR +G VEI  V  K+  +  V        + AL W+ D      RLF  +LD  + E+D+  +  K+  DS GG +W + +      LAVGCEDG ++LFS AD  L FS++  T   RV+SLAW                  Q   IF G+ +G I   +A+TG +  R+T+E       +++W L  L D TLVSGDS GN+ FW+   GTL Q F    ADILA+       T+FASGVD+++V  +R  +                 N TW  + S+R HSHDVRALAL                 +LVSGG DT+L  Y  N+F   RP  IA  PY    +LA+    R+L++Q    L LW L AT+  T   +  +   +LE+   K   + CS L+ N  F+A +  +EL++FE++ E++               Q  K + L  + V+     LAF PDS  LV+ +   ++  L L     +     D   + G E   V    V L+ S DG+ +A G  +  + IY++ S                         +    +LPR     T+++++P    LV+  VSN F  +D+E + L+ W +    + PKEL++  + + G+ F+P + + L L+
Sbjct:   60 LQVHRCRFVDWMPSAVHALCFNAAGDQLAVARATGDVEIWSVSSKWH-LKFVLAGSAQSQVSALCWTPDSD----RLFASSLDGTLWELDLQSLCRKNVTDSNGGPIWSMVMNAETQQLAVGCEDGRIRLFSFADGQLYFSKSFLTTGGRVVSLAWH----------------SQAHKIFSGSENGIIHCWNAVTGRNESRITLETLTK-QKSVVWSLVVLDDLTLVSGDSAGNLSFWNAPTGTLLQKFSHLTADILAICVSQSNNTLFASGVDNQVVEFRRSVAD--------------SGNATWAYSYSHRGHSHDVRALAL-----------SANAKPVLVSGGIDTQLVWYRGNSFGASRPAKIASMPYRQSVALANE--KRVLMVQKSTSLDLWRL-ATQSATTGAITKKRKLLLELNVGKALNLSCSALAPNASFVACSNSKELKLFELDTEQD--------------FQPKKVTTLPHS-VKGPARVLAFSPDSTRLVIASSSHQIRVLDLSKMEVLKTFEVDTPATTGEESASVPSPLVSLTISSDGQWLATGDASNNIAIYNLDS-------------------------MQFYCQLPRPSEMHTSMSFNPSGKTLVVTLVSNSFVCYDVETKGLSEWYRQNHEQFPKELVEGRN-LKGMAFDPANPDFLYLY 650          
BLAST of NO15G01970 vs. NCBI_GenBank
Match: XP_008865305.1 (hypothetical protein H310_03283 [Aphanomyces invadans] >ETW05528.1 hypothetical protein H310_03283 [Aphanomyces invadans])

HSP 1 Score: 313.5 bits (802), Expect = 2.000e-81
Identity = 210/697 (30.13%), Postives = 336/697 (48.21%), Query Frame = 0
Query:   23 IHRCRFLNWEPQAVVCMAVSASGQLLAVARESGSVEI-RLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVGTLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKLFSTADDALE---FSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIFVGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGDSLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCLKRQPSSXXXXXXXXXXXXXXXSNGTWVATASNRAHSHDVRALALVRKSSGRQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLASRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELIICSTLSSNGRFLAYATGEELRVFEVEMEKEEEDESGREERGRVNLQRWKPSALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRLDLPVAVVEEARDDATSAGAEGRCVVRLSCSQDGRSVAVGRWNGEVEIYSILSGEXXXXXXXXXXXXXXXXXXEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRFYLFDIEAQQLTGWSKDFGHRLPKELLDRHDC-VLGICFNPDSSNALILHGFGFVCYVDLDRPMGR 715
            +HRCRFL +EP  +  M  +A+G +LAVAR++G++E+    L +F +  +V     T +I  + W+     +  RLF   LD  +SE+++  +R  H   + GG VWC+    ++ +LAVGCEDG ++L++  +D  E   F + L     RV+SLA  +   S +              +F G  DG I   D  TG +  RMT+E      PA++W L  L D T++SGDS GN+H WDG  GTL Q+F    AD+L L        +FASG+D++++ L++  +S                +  W    S+RAH+HDVRALA+   +    +G     + +LVSGG DT L  Y+   F  +RP    P P  P  SLA +  AR +L+QH   L +WALG+      A     P+ V +++ A    I+ S +S +G+F+A +T   L+VF V               GRV  +    S +          ++ F  DS+ L+ G    R++ L     + V  + R   T +         L+ S DG+ +AVG  +  + ++++                           ++     P      T L +HP    LV+A V+N F  +D+E + +T WS++  H+LPK L  R    + G+ F+P   N+++     F+ ++D+D+P+ R
Sbjct:   51 VHRCRFLKYEPSTITAMGFNAAGDMLAVARQNGNIELWHASLRQFHLHAVVS-GRSTAVISGVVWT-----SSNRLFASCLDGTVSEVNLNTLRFIHCIHANGGPVWCMQYKASEQVLAVGCEDGRIRLYAVPEDEAEPIVFHKVLGGTGRRVVSLA--LHADSDI--------------VFGGNDDGVIYKWDTRTGRNESRMTLERFAKQAPAVVWSLLVLNDMTVISGDSNGNVHTWDGLSGTLLQTFAQLTADVLTLAVDSSETLLFASGIDNQVIQLRKGSAS-----------SGKAPSSQWAYAYSHRAHTHDVRALAISPGTLSTDDG----STPVLVSGGVDTHLVWYNAAKFNALRPNKATPLPQRPFVSLAPQ--ARHVLVQHPTSLEVWALGSANAAAPAA----PTMVAQLKLAAEANIVSSAISPDGKFIAASTASVLKVFSV--------------NGRVIKKLPLASTVAHPAY-----SMVFTADSQRLITGDVAVRLIDLTSLSAIKVFVKKRSVQTKS---------LAVSSDGQWLAVGDLDNHISVFNL-------------------------DAMSFYADFPTPQDMHTCLGFHPNGKTLVVATVTNHFACYDVEQKNMTEWSRENHHKLPKTLFLRQPYNIKGLAFHPTQPNSVVFWSQQFLFHIDIDQPIVR 651          
BLAST of NO15G01970 vs. NCBI_GenBank
Match: POM75558.1 (U3 small nucleolar RNA-associated protein, partial [Phytophthora palmivora var. palmivora])

HSP 1 Score: 312.0 bits (798), Expect = 5.900e-81
Identity = 229/730 (31.37%), Postives = 354/730 (48.49%), Query Frame = 0
Query:    8 AGSSEADATEQHLLSIHRCRFLNWEPQAVVCMAVSASGQLLAVARESGSVEIRLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVGTLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKLFSTADDALEFSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIFVGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGDSLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCLKRQPSSXXXXXXXXXXXXXXXSNGTWVATASNRAHSHDVRALALVRKSSGRQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLASRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELIICSTLSSNGRFLAYATGEELRVFEVEMEKEEEDESGREERGRVNLQRWKPSALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRL-------DLPVAVVEEARDDATSAGAEGRCVVRLSCSQDGRSVAVGRWNGEVEIYSILSGEXXXXXXXXXXXXXXXXXXEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRFYLFDIEAQQLTGWSKDFGHRLPKELLDRHDCVLGICFNPDSSNALILHGFGFVCYVDLDRPMGRHVQLLPRTHPAALAQR 731
            A   +AD +    L +HRCRF++W P A+  ++ +A+G  LAVAR +G VE+  V  K+ +  +V        + AL WS       +RLF  +LD  + E++   +  K+  DS GG +W + +  A   LAVGCEDG ++LFS ADD L FS+A  T   RV+SLAW            +A        IF G+  G I   +A+TG +  R+T+E   + H A++W L  L D TLVSGDS GN+ FW+   GTL Q F    ADILA+       T+FASGVD+++V  +R  +                 N TW  + S+R HSHDVRALAL   S+G +         +LVSGG DT+L  Y   +F   RP  I   PY    +LA+    R+L++Q    L LW L AT+      +  +   +LE+   K   + CS L+ N  F+A +  +EL++FE+++ ++               Q  K + L ++ V      LAF PDS  LV+ +   ++  L L          VA      +++ SA +    +V L+ S DG+ +A G  +  + IY++ S                         +    +LPR     T++ ++P    LV+  VSN F  +D+E + L+ W +      PKEL++  + + G+ F+P + + L L+    +  ++    MG+HV    ++ P    +R
Sbjct:    6 AKKRKADESVATTLQVHRCRFVDWMPAAIHALSFNAAGDQLAVARANGDVELWSVGRKWHLKFVVS-GSSQSQVTALCWS-----ESSRLFACSLDGTLWEMNFETLSKKNVVDSNGGPIWSMVLDAASQQLAVGCEDGRIRLFSFADDQLHFSKAFLTTGTRVVSLAWH----------GTAHK------IFSGSEAGVIHCWNAVTGRNESRITLE-NLAKHKAIVWSLVVLDDLTLVSGDSTGNLSFWNAPTGTLLQKFSHLTADILAICVSKNNNTLFASGVDNQVVEFRRSVAE--------------SGNSTWAYSYSHRGHSHDVRALAL---SNGAKS--------VLVSGGIDTQLVWYLGTSFGAGRPAKIVSMPYPQTIALANE--KRVLMVQKSTSLDLWKL-ATQSAATGTITQKHKLLLELNVGKAWNLSCSALAPNASFVACSNAKELKLFELDVNQD--------------FQPTKVTTLPQS-VTGPARVLAFSPDSTRLVIASSSHQIRVLDLTKMEVLKTFKVATPTPTDEESDSAPSP---LVSLTVSSDGQWLATGDASNNIAIYNLDS-------------------------MQFYCKLPRPSEMHTSMGFNPSGKTLVVTLVSNSFVCYDVETKGLSEWYRQNHEHFPKELVEGRN-IKGMTFDPANPDFLYLYSPVSLYQIN----MGKHVNGSAKSPPKKTRRR 636          
The following BLAST results are available for this feature:
BLAST of NO15G01970 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22410.15.800e-27056.26cirhin [Nannochloropsis gaditana][more]
OQS02331.11.600e-8631.48U3 small nucleolar RNA-associated protein [Thraust... [more]
OWZ19797.16.100e-8633.02U3 small nucleolar RNA-associated protein [Phytoph... [more]
ETP52523.11.100e-8232.40hypothetical protein F442_02500 [Phytophthora para... [more]
ETI54734.12.400e-8232.26hypothetical protein F443_02529, partial [Phytopht... [more]
XP_008899763.12.400e-8232.26hypothetical protein PPTG_07340 [Phytophthora para... [more]
ETO83496.12.400e-8232.26hypothetical protein F444_02520 [Phytophthora para... [more]
KUF83201.12.400e-8232.26U3 small nucleolar RNA-associated protein 4 [Phyto... [more]
XP_008865305.12.000e-8130.13hypothetical protein H310_03283 [Aphanomyces invad... [more]
POM75558.15.900e-8131.37U3 small nucleolar RNA-associated protein, partial... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL142nonsL142Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001411NSK001411Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01970.1NO15G01970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|527386gene_4747Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100067g20gene8041Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01970.1NO15G01970.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01970 ID=NO15G01970|Name=NO15G01970|organism=Nannochloropsis oceanica|type=gene|length=2643bp
ATGGTAGGCAGGGCAACACCTGCGGGGAGCAGCGAGGCGGATGCGACCGA
GCAGCACTTGCTAAGCATCCACCGATGCCGCTTCTTGAACTGGGAGCCAC
AAGCTGTCGTTTGCATGGCCGTGAGCGCTTCTGGTCAACTGCTGGCTGTG
GCCCGCGAGAGCGGTTCGGTGGAAATCCGCCTCGTTCTGGAAAAGTTTCG
GGTGGTAGGCATGGTGCCCTTACCGGGCAAGACAGGGCTCATTCGGGCGT
TGGCCTGGTCCCTTGACGTGCAAGATGCAAGAGCAAGGCTTTTTGTCGGG
ACCTTAGATACGTTCATTTCGGAAATTGACGTGACTGGCATGCGTGTAAA
GCATCGGCGGGATTCGTACGGTGGAGCCGTATGGTGCTTAGCGGTAGCAC
CCGCTCAGGATCTACTAGCCGTGGGATGCGAAGATGGCTCCGTCAAGCTT
TTCAGCACTGCAGACGATGCGTTGGAATTCTCTCGGGCGCTGCCAACGGT
GAATGCACGGGTTCTGTCCTTGGCGTGGCAAATGTTTCCTGCCTCTTCTG
TCCCTATCTCCTCCTCAGCCTCCTCATCAAGGCAACAACCCGGCATATTC
GTCGGTGCCATTGATGGGACGATCCGCCACCTTGACGCCATAACAGGGCA
CAGCGCCTATCGTATGACAGTGGAAGCGCGGAATAGCGTGCACCCTGCTA
TGATTTGGTGCTTGAAATCTCTGCGAGATGGTACTTTAGTGAGTGGTGAT
TCACTGGGCAACATCCATTTTTGGGATGGAGCTCTAGGGACGTTGAAACA
GTCTTTTTACGTACATGAGGCAGATATTTTGGCCTTGGAAGCTGGCCCGA
TGGGGGAGACAGTGTTCGCATCGGGGGTGGACAGTAAATTGGTGTGTTTG
AAACGGCAGCCGTCCTCCCAGCAGCAGCAGAAGCAGCAGCACCAGCACCA
GCGGGTGGAAGCATCGAATGGGACATGGGTCGCGACGGCGTCCAATCGTG
CACACAGCCACGACGTACGAGCCCTTGCCTTGGTGCGCAAGTCCTCCGGA
AGACAGGAAGGGGGGGGAGGAAGACAGTCCTACCTGCTGGTCTCGGGGGG
GGAAGACACTAAGCTGTGTACTTACTCTGTCAATGCCTTTGCTCGCATGA
GGCCTAGGTATATCGCTCCTTACCCTTACCACCCGCTTGCGAGCTTGGCC
TCACGTCATCCGGCACGCTTGTTGCTGATGCAGCATGACCGGAAGTTGCA
CCTATGGGCCTTGGGGGCGACGAAAGATGAGACGGCCGCAGTATTACGAC
ATGAACCTTCGCCTGTGTTGGAGATTCAGGCAGCCAAAGGGGAGTTGATA
ATTTGCTCCACTCTGTCGTCCAACGGGAGATTTTTAGCCTATGCGACGGG
GGAGGAATTAAGGGTGTTTGAGGTCGAGATGGAGAAAGAGGAGGAGGACG
AGAGCGGGCGGGAGGAGAGGGGACGCGTGAATCTTCAAAGGTGGAAACCC
TCAGCGTTACAAAGGGCGGGTGTGAGGAAGGGTATCACTGCTCTAGCCTT
CTGCCCTGACTCAAAGACGCTGGTACTCGGTACTGGGGGAGGGAGGGTGC
TTAGGCTGCGATTGGATCTGCCTGTGGCAGTGGTGGAGGAGGCGAGGGAT
GATGCGACATCGGCTGGGGCAGAAGGAAGGTGTGTGGTTAGATTGTCATG
CAGTCAGGATGGACGTTCGGTGGCTGTCGGGAGATGGAATGGGGAGGTGG
AGATTTATTCCATCCTTTCTGGTGAAAGGAAGAAGAAGAAGAAGAAAGAA
GGAGGAGAGGCAGCGGCAGCAGTGGCGGGAGAGGGAGAAAGAGAACTGAC
CTTGTCTTGGCGATTGCCGAGATTAGACTCTGCACCGACTGCTTTGGCTT
ATCACCCGGAGGCGGATGTGTTGGTAATTGCTTGCGTGTCTAATCGATTT
TATCTCTTTGATATAGAAGCGCAGCAGTTGACGGGGTGGTCGAAAGACTT
CGGACATCGCTTGCCGAAGGAATTGTTGGACCGACATGATTGTGTGTTGG
GTATCTGCTTTAATCCTGACTCGTCGAATGCCTTGATTTTACATGGCTTC
GGCTTCGTGTGTTATGTTGATCTGGATCGGCCGATGGGCCGACATGTTCA
GCTCTTGCCCAGGACGCATCCTGCGGCCCTCGCACAGAGGGAAGGGATTC
GAAAGCGCAACCCACCATGGTTGGTGGCGATGAAGCAGAAGAAGCAGAAG
AAGAAGAAGGAGGAAAAGAAGAACGAGGAGGCGGAGGGCACTATGCTGCC
TGCGGCAGAAGCAGCAGCAACAGCGGGAGGACGGGTCGAGACCATGCCTA
ATGGTGGAGGGCGGCGGAGGACCCGTGGTGAGAGCATTGCGGAAGAGGAG
GAGATGCGAGAGCAACTGATGGCTGCAGCCGCAGCGGCCACAGAGACGGC
GAAGTTGGCAAGGCGGCCCGCGAACGTAGAAGAGAAGGAGGACGCATGGA
ACTTCATGCTGCATTTGGGGTACCAAGGGGTCTTGGCCGTGCTGGCATTG
GGGCGTGATGAGTTGTTGGTTGTGGAGGAGCCATGGATTAAGATTGTGAG
CAAGCTGCCAGATGTCTTGCATCGTCAGCGATATGGCACGTAA
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protein sequence of NO15G01970.1

>NO15G01970.1-protein ID=NO15G01970.1-protein|Name=NO15G01970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=881bp
MVGRATPAGSSEADATEQHLLSIHRCRFLNWEPQAVVCMAVSASGQLLAV
ARESGSVEIRLVLEKFRVVGMVPLPGKTGLIRALAWSLDVQDARARLFVG
TLDTFISEIDVTGMRVKHRRDSYGGAVWCLAVAPAQDLLAVGCEDGSVKL
FSTADDALEFSRALPTVNARVLSLAWQMFPASSVPISSSASSSRQQPGIF
VGAIDGTIRHLDAITGHSAYRMTVEARNSVHPAMIWCLKSLRDGTLVSGD
SLGNIHFWDGALGTLKQSFYVHEADILALEAGPMGETVFASGVDSKLVCL
KRQPSSQQQQKQQHQHQRVEASNGTWVATASNRAHSHDVRALALVRKSSG
RQEGGGGRQSYLLVSGGEDTKLCTYSVNAFARMRPRYIAPYPYHPLASLA
SRHPARLLLMQHDRKLHLWALGATKDETAAVLRHEPSPVLEIQAAKGELI
ICSTLSSNGRFLAYATGEELRVFEVEMEKEEEDESGREERGRVNLQRWKP
SALQRAGVRKGITALAFCPDSKTLVLGTGGGRVLRLRLDLPVAVVEEARD
DATSAGAEGRCVVRLSCSQDGRSVAVGRWNGEVEIYSILSGERKKKKKKE
GGEAAAAVAGEGERELTLSWRLPRLDSAPTALAYHPEADVLVIACVSNRF
YLFDIEAQQLTGWSKDFGHRLPKELLDRHDCVLGICFNPDSSNALILHGF
GFVCYVDLDRPMGRHVQLLPRTHPAALAQREGIRKRNPPWLVAMKQKKQK
KKKEEKKNEEAEGTMLPAAEAAATAGGRVETMPNGGGRRRTRGESIAEEE
EMREQLMAAAAAATETAKLARRPANVEEKEDAWNFMLHLGYQGVLAVLAL
GRDELLVVEEPWIKIVSKLPDVLHRQRYGT*
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Synonyms
Publications