NO15G01890, NO15G01890 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01890 vs. NCBI_GenBank
Match: EWM22394.1 (cyclophilin [Nannochloropsis gaditana]) HSP 1 Score: 349.4 bits (895), Expect = 8.100e-93 Identity = 164/174 (94.25%), Postives = 168/174 (96.55%), Query Frame = 0
Query: 40 IMPNPVVFFDCTTGSGKALGRVEMTLRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFPDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAIESYGSRTGATREKIIIADCGQLS 214
IMPNPVVFFD TGSG LGR+EMTLRADVVPKTAENFRALCTGEKG GRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYG+KFPDENF LKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKA+ESYGSRTGATREKI+IADCGQLS
Sbjct: 27 IMPNPVVFFDVQTGSGNNLGRIEMTLRADVVPKTAENFRALCTGEKGAGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGNKFPDENFTLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAVESYGSRTGATREKIVIADCGQLS 200
BLAST of NO15G01890 vs. NCBI_GenBank
Match: XP_011402103.1 (Peptidyl-prolyl cis-trans isomerase CYP18-4 [Auxenochlorella protothecoides] >KFM29054.1 Peptidyl-prolyl cis-trans isomerase CYP18-4 [Auxenochlorella protothecoides]) HSP 1 Score: 307.0 bits (785), Expect = 4.600e-80 Identity = 147/173 (84.97%), Postives = 156/173 (90.17%), Query Frame = 0
Query: 41 MPNPVVFFDCTTGSGKALGRVEMTLRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFPDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAIESYGSRTGATREKIIIADCGQLS 214
M PVVFFD + GS LGR+EM LRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIP FMCQGGDFTAGNGTGGESIYG+KF DENF+L HTGPGILSMANAGPNTNGSQFFLCTA TAWLDGKHVVFGSVTKG+DVVK IESYGS +GAT++ I I DCGQL+
Sbjct: 1 MSKPVVFFDVSAGS-TPLGRIEMELRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFKLTHTGPGILSMANAGPNTNGSQFFLCTAATAWLDGKHVVFGSVTKGLDVVKKIESYGSGSGATKQVIRITDCGQLA 172
BLAST of NO15G01890 vs. NCBI_GenBank
Match: XP_005772559.1 (peptidyl-prolyl cis-trans isomerase putative cyclophilin protein [Emiliania huxleyi CCMP1516] >EOD20130.1 peptidyl-prolyl cis-trans isomerase putative cyclophilin protein [Emiliania huxleyi CCMP1516]) HSP 1 Score: 304.7 bits (779), Expect = 2.300e-79 Identity = 143/173 (82.66%), Postives = 157/173 (90.75%), Query Frame = 0
Query: 41 MPNPVVFFDCTTGSGKALGRVEMTLRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFPDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAIESYGSRTGATREKIIIADCGQLS 214
M NPVVFFD T G G GR+EMTLRADVVPKTAENFRALCTGEKG G+SGKPLHFKGS+FHRVI +FMCQGGDFTAGNGTGGESIYG+KF DENFQLKHTGPGILSMANAGP TNGSQFFLCT +T WLDGKHVVFGSVTKGM+VVKAIE+ GS++G T +K++IADCGQ+S
Sbjct: 1 MSNPVVFFDMTIG-GAPAGRIEMTLRADVVPKTAENFRALCTGEKGQGKSGKPLHFKGSSFHRVITNFMCQGGDFTAGNGTGGESIYGAKFADENFQLKHTGPGILSMANAGPGTNGSQFFLCTVKTDWLDGKHVVFGSVTKGMEVVKAIEAVGSQSGQTAKKVVIADCGQIS 172
BLAST of NO15G01890 vs. NCBI_GenBank
Match: XP_005643480.1 (cyclophilin-like protein [Coccomyxa subellipsoidea C-169] >EIE18936.1 cyclophilin-like protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 301.6 bits (771), Expect = 1.900e-78 Identity = 143/173 (82.66%), Postives = 153/173 (88.44%), Query Frame = 0
Query: 41 MPNPVVFFDCTTGSGKALGRVEMTLRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFPDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAIESYGSRTGATREKIIIADCGQLS 214
M NPVVFFD + G G +GR+EMTLR DV P+TAENFRALCTGEKG GR GKPLHFKGS+FHRVIPDFMCQGGDFTAGNGTGGESIYG+KF DENF LKHTGPGILSMANAG NTNGSQFFLCTA+TAWLDGKHVVFGSVTKGMDVVK IES+GS +G T + I I DCGQLS
Sbjct: 1 MSNPVVFFDVSAG-GAPVGRIEMTLRNDVTPRTAENFRALCTGEKGVGRMGKPLHFKGSSFHRVIPDFMCQGGDFTAGNGTGGESIYGAKFADENFTLKHTGPGILSMANAGANTNGSQFFLCTAKTAWLDGKHVVFGSVTKGMDVVKKIESFGSGSGKTSKPITITDCGQLS 172
BLAST of NO15G01890 vs. NCBI_GenBank
Match: XP_001700372.1 (peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Chlamydomonas reinhardtii] >PNW87794.1 hypothetical protein CHLRE_01g002300v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 300.8 bits (769), Expect = 3.300e-78 Identity = 140/173 (80.92%), Postives = 150/173 (86.71%), Query Frame = 0
Query: 41 MPNPVVFFDCTTGSGKALGRVEMTLRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFPDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAIESYGSRTGATREKIIIADCGQLS 214
MPNP+VFFD T G +GR+EM L AD VPKTAENFRALCTGEKG GRSGKPLHFKGSTFHRVIP+FMCQGGDFT GNGTGGESIYG KFPDENF+ +HTGPG+LSMANAGPNTNGSQFFLCT ETAWLDGKHVVFG V KGMDVVK +E YGS +G TR I IADCGQL+
Sbjct: 1 MPNPIVFFD-ITADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTFHRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFFLCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRATIAIADCGQLA 172
BLAST of NO15G01890 vs. NCBI_GenBank
Match: XP_005787000.1 (peptidyl-prolyl isomerase [Emiliania huxleyi CCMP1516] >EOD34571.1 peptidyl-prolyl isomerase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 300.8 bits (769), Expect = 3.300e-78 Identity = 142/173 (82.08%), Postives = 155/173 (89.60%), Query Frame = 0
Query: 41 MPNPVVFFDCTTGSGKALGRVEMTLRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFPDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAIESYGSRTGATREKIIIADCGQLS 214
M PVVFFD T G G GR+EMTLRADVVPKTAENFRALCTGEKG G+SGKPLHFKGS FHRVI +FMCQGGDFTAGNGTGGESIYG+KF DENFQLKHTGPGILSMANAGP TNGSQFFLCT +T WLDGKHVVFGSVTKGM+VVKAIE+ GS++G T +K++IADCGQ+S
Sbjct: 1 MSCPVVFFDMTIG-GAPAGRIEMTLRADVVPKTAENFRALCTGEKGMGKSGKPLHFKGSAFHRVITNFMCQGGDFTAGNGTGGESIYGAKFADENFQLKHTGPGILSMANAGPGTNGSQFFLCTVKTDWLDGKHVVFGSVTKGMEVVKAIEAVGSQSGQTAKKVVIADCGQIS 172
BLAST of NO15G01890 vs. NCBI_GenBank
Match: AAC05639.1 (cyclophilin 1 [Chlamydomonas reinhardtii]) HSP 1 Score: 297.0 bits (759), Expect = 4.800e-77 Identity = 138/173 (79.77%), Postives = 148/173 (85.55%), Query Frame = 0
Query: 41 MPNPVVFFDCTTGSGKALGRVEMTLRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFPDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAIESYGSRTGATREKIIIADCGQLS 214
MPNP+VFFD T G +GR+EM L AD VPKTAENFRALCTGEKG GRSGKPLHFKGSTFHRVIP+FMCQGGDFT GNGTGGESIYG KFPDENF+ +HTGPG+LSMANAGPNTNGSQFFLCT ETAWLDGKHVVFG V KGMDVVK +E YGS +G TR IADC QL+
Sbjct: 1 MPNPIVFFD-ITADGAPVGRIEMELYADDVPKTAENFRALCTGEKGVGRSGKPLHFKGSTFHRVIPNFMCQGGDFTRGNGTGGESIYGEKFPDENFKHRHTGPGVLSMANAGPNTNGSQFFLCTVETAWLDGKHVVFGKVCKGMDVVKKVEGYGSSSGKTRATFAIADCAQLA 172
BLAST of NO15G01890 vs. NCBI_GenBank
Match: XP_021378464.1 (peptidyl-prolyl cis-trans isomerase 1-like [Mizuhopecten yessoensis] >OWF38368.1 Peptidyl-prolyl cis-trans isomerase 1 [Mizuhopecten yessoensis]) HSP 1 Score: 296.6 bits (758), Expect = 6.200e-77 Identity = 140/172 (81.40%), Postives = 150/172 (87.21%), Query Frame = 0
Query: 41 MPNPVVFFDCTTGSGKALGRVEMTLRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFPDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAIESYGSRTGATREKIIIADCGQL 213
M NP VFFD T G G + GR+EM LRADVVPKT+ENFRALCTGEKGTG+SGKPLHFKGS+FHRVI DFMCQGGDFT GNGTGGESIYG KF DENF LKHTGPGILSMANAGP TNGSQFFLCT +TAWLDGKHVVFGSVTKGM+VVKAIE GS G T + ++IADCGQL
Sbjct: 1 MSNPKVFFDMTIG-GASAGRIEMELRADVVPKTSENFRALCTGEKGTGKSGKPLHFKGSSFHRVITDFMCQGGDFTRGNGTGGESIYGEKFADENFTLKHTGPGILSMANAGPGTNGSQFFLCTVKTAWLDGKHVVFGSVTKGMEVVKAIEKVGSTGGTTSKPVVIADCGQL 171
BLAST of NO15G01890 vs. NCBI_GenBank
Match: CBN79758.1 (peptidyl-prolyl cis-trans isomerase, cyclophilin-type [Ectocarpus siliculosus]) HSP 1 Score: 296.2 bits (757), Expect = 8.200e-77 Identity = 138/173 (79.77%), Postives = 150/173 (86.71%), Query Frame = 0
Query: 41 MPNPVVFFDCTTGSGKALGRVEMTLRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFPDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAIESYGSRTGATREKIIIADCGQLS 214
M NPVVFFD T G G+ GR+EMTLR DVVP+TAENFR LCTGEKGTGRSGKPLHFKGS+FHRVI DFMCQGGDFT GNGTGGESIYG KF DENFQLKHT PG+LSMANAG NTNGSQFFLCT T+WLDGKHVVFG VTKGMDVVKA+E+ GS +G T ++IADCGQ+S
Sbjct: 1 MANPVVFFDITIG-GQTAGRIEMTLRQDVVPRTAENFRCLCTGEKGTGRSGKPLHFKGSSFHRVITDFMCQGGDFTRGNGTGGESIYGEKFADENFQLKHTEPGVLSMANAGANTNGSQFFLCTVVTSWLDGKHVVFGKVTKGMDVVKAVEAVGSSSGKTSSPVVIADCGQIS 172
BLAST of NO15G01890 vs. NCBI_GenBank
Match: XP_005851021.1 (hypothetical protein CHLNCDRAFT_29941 [Chlorella variabilis] >EFN58919.1 hypothetical protein CHLNCDRAFT_29941 [Chlorella variabilis]) HSP 1 Score: 294.7 bits (753), Expect = 2.400e-76 Identity = 140/173 (80.92%), Postives = 147/173 (84.97%), Query Frame = 0
Query: 41 MPNPVVFFDCTTGSGKALGRVEMTLRADVVPKTAENFRALCTGEKGTGRSGKPLHFKGSTFHRVIPDFMCQGGDFTAGNGTGGESIYGSKFPDENFQLKHTGPGILSMANAGPNTNGSQFFLCTAETAWLDGKHVVFGSVTKGMDVVKAIESYGSRTGATREKIIIADCGQLS 214
M NP VFFD T GS LGR+ M LRADVVPKTAENFR LCTGEKGTGRSGKPLHFKGSTFHRVIP FMCQGGDFT GNGTGGESIYG KF DENFQLKHTG G+LSMANAGPNTNGSQFFLCT T WLDGKHVVFG V +G+DVVK +ESYGS +G T + I IADCGQLS
Sbjct: 1 MGNPRVFFDVTAGS-TPLGRIVMELRADVVPKTAENFRCLCTGEKGTGRSGKPLHFKGSTFHRVIPQFMCQGGDFTRGNGTGGESIYGEKFADENFQLKHTGAGVLSMANAGPNTNGSQFFLCTVSTPWLDGKHVVFGQVVEGLDVVKKVESYGSGSGKTSQTITIADCGQLS 172 The following BLAST results are available for this feature:
BLAST of NO15G01890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01890 ID=NO15G01890|Name=NO15G01890|organism=Nannochloropsis oceanica|type=gene|length=1874bpback to top protein sequence of NO15G01890.1 >NO15G01890.1-protein ID=NO15G01890.1-protein|Name=NO15G01890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=214bpback to top Synonyms
Publications
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