NO15G01810, NO15G01810 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01810 vs. NCBI_GenBank
Match: EWM22399.1 (2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase [Nannochloropsis gaditana]) HSP 1 Score: 323.2 bits (827), Expect = 6.400e-85 Identity = 160/190 (84.21%), Postives = 174/190 (91.58%), Query Frame = 0 Query: 29 FHTITNTNRIVIVLDQSYRKDFAFLQETDPRIVFADPGKERQDSVLNGFCQTLPDASIVCIHDSARPLVSQAAVLASLRDGVKHGAAVLGVPMKATVKESEDGEFVLRTINRSRLWEIQTPQVIKPDILAKAFEYVRENALEVTDDVSMVEEVGLPVKLTMGEYTNIKLTTPEDLGVAEGFLKQRAEGKL 219 F T+ NRIVIVLD+SYR++F+FLQE DPRIVFADPGKERQDSV NGF QTLPDAS+VCIHDSARPLVSQ+AVLASLRDG HGAAVLGVPMKATVKES DGEFVLRT+NRSRLWEIQTPQVIKPDIL++AF V E LEVTDDVSMVE+VG PVKLTMGEYTNIKLTTPED+GVAEGFL++RAEGKL Sbjct: 121 FSTLPGVNRIVIVLDKSYRQEFSFLQEEDPRIVFADPGKERQDSVFNGFSQTLPDASVVCIHDSARPLVSQSAVLASLRDGSVHGAAVLGVPMKATVKESADGEFVLRTMNRSRLWEIQTPQVIKPDILSEAFALVTEKGLEVTDDVSMVEQVGRPVKLTMGEYTNIKLTTPEDIGVAEGFLRERAEGKL 310
BLAST of NO15G01810 vs. NCBI_GenBank
Match: CEM24010.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 230.7 bits (587), Expect = 4.300e-57 Identity = 121/195 (62.05%), Postives = 147/195 (75.38%), Query Frame = 0 Query: 20 PIHSFSHFPFHTITNTNRIVIVLDQSYRKDFAFLQETDPRIVFADPGKERQDSVLNGFCQTLPD-ASIVCIHDSARPLVSQAAVLASLRDGVKHGAAVLGVPMKATVKESEDGEFVLRTINRSRLWEIQTPQVIKPDILAKAFEYVRENALEVTDDVSMVEEVGLPVKLTMGEYTNIKLTTPEDLGVAEGFLKQR 214 P+ S F T+ IV+VLD++YR F + D RIVFA PG+ERQDSV NG Q +P+ S+VCIHDSARPLV+Q VL +RD HGAAV+GVPMKATVKESEDG+FVLRTI RSRLWEIQTPQVI+P +L + F VRE +L VTDDVS+VE +G PVKLTMGEY N+K+TTPED+ +AE F++ R Sbjct: 93 PVLEHSVELFLTLPGVKHIVLVLDEAYRDTF---RGRDERIVFAPPGEERQDSVWNGL-QAMPEGVSVVCIHDSARPLVTQGTVLQCIRDANTHGAAVVGVPMKATVKESEDGQFVLRTIERSRLWEIQTPQVIQPALLKEGFALVREKSLAVTDDVSLVELLGKPVKLTMGEYENLKITTPEDMVIAEQFMRAR 283
BLAST of NO15G01810 vs. NCBI_GenBank
Match: CBJ33583.1 (4-diphosphocytidyl-2C-methyl-D-erythritol synthase, chloroplast precursor [Ectocarpus siliculosus]) HSP 1 Score: 217.6 bits (553), Expect = 3.800e-53 Identity = 108/185 (58.38%), Postives = 140/185 (75.68%), Query Frame = 0 Query: 29 FHTITNTNRIVIVLDQSYRKDFAFLQETDPRIVFADPGKERQDSVLNGFCQTLPDASIVCIHDSARPLVSQAAVLASLRDGVKHGAAVLGVPMKATVKESEDGEFVLRTINRSRLWEIQTPQVIKPDILAKAFEYVRENALEVTDDVSMVEEVGLPVKLTMGEYTNIKLTTPEDLGVAEGFLKQR 214 F + +++++VLD+ YR LQ+ + R+VFADPG ERQ SV N + +S+VCIHD+ARPLV++AAV + D ++GAAVLGVPMKATVKES DG+FV RTI+RSRLW+IQTPQV+KPD+L + F+ V EVTDDVS+VE++GLPVKLT G+YTN+KLTTPEDL VA L+ R Sbjct: 96 FLRLKGVSQLILVLDEQYRPMLQDLQKREGRLVFADPGLERQHSVYNALQKVEDGSSLVCIHDAARPLVTKAAVKKVIADADEYGAAVLGVPMKATVKESADGQFVQRTIDRSRLWDIQTPQVVKPDLLRRGFDKVMSERWEVTDDVSIVEQLGLPVKLTEGDYTNLKLTTPEDLVVASRILEAR 280
BLAST of NO15G01810 vs. NCBI_GenBank
Match: XP_009034896.1 (hypothetical protein AURANDRAFT_23670 [Aureococcus anophagefferens] >EGB10061.1 hypothetical protein AURANDRAFT_23670 [Aureococcus anophagefferens]) HSP 1 Score: 216.5 bits (550), Expect = 8.400e-53 Identity = 106/186 (56.99%), Postives = 140/186 (75.27%), Query Frame = 0 Query: 29 FHTITNTNRIVIVLDQSYRKDFAFLQETDPRIVFADPGKERQDSVLNGFCQTLPDASIVCIHDSARPLVSQAAVLASLRDGVKHGAAVLGVPMKATVKESEDGEFVLRTINRSRLWEIQTPQVIKPDILAKAFEYVRENALEVTDDVSMVEEVGLPVKLTMGEYTNIKLTTPEDLGVAEGFLKQRA 215 F + + +V+V+++ YR +FA D R+ FADPG ERQDSV +G DA++VCIHD+ARPLV+ + + D HGAAVLGVP+KATVKES+DGEFVLRT++RSRLWE+ TPQVIKP +L + F+ V + LEVTDDVS++E++GLPVKLT+GEYTN+K+TTP+D+ VA L QRA Sbjct: 77 FLGLEGVSSLVLVINEQYRGEFA-PYAADGRVTFADPGAERQDSVRSGLDACPADAALVCIHDAARPLVTPEEIFKVIGDARDHGAAVLGVPVKATVKESDDGEFVLRTVDRSRLWEVHTPQVIKPALLREGFDKVAKEGLEVTDDVSIIEQLGLPVKLTLGEYTNLKVTTPDDMVVATQILDQRA 261
BLAST of NO15G01810 vs. NCBI_GenBank
Match: XP_005820482.1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Guillardia theta CCMP2712] >EKX33502.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Guillardia theta CCMP2712]) HSP 1 Score: 216.5 bits (550), Expect = 8.400e-53 Identity = 111/197 (56.35%), Postives = 141/197 (71.57%), Query Frame = 0 Query: 20 PIHSFSHFPFHTITNTNRIVIVLDQSYRKDFAFLQETDPRIVFADPGKERQDSVLNGFCQTLPDASIVCIHDSARPLVSQAAVLASLRDGVKHGAAVLGVPMKATVKESEDGEFVLRTINRSRLWEIQTPQV------IKPDILAKAFEYVRENALEVTDDVSMVEEVGLPVKLTMGEYTNIKLTTPEDLGVAEGFL 211 PI S F I RIVIV+ YR A + + D RI FA+PGKERQDSV NG +T D S++CIHD+ARPLV++ +L+ + D ++HGAAVL VPMKATVKESEDG+FVLRTI RSRLWEI TPQV I+P +L + F+ V+E L VTDDVS++E++ PVK+T+GEYTNIK+TTPED+ +A L Sbjct: 74 PILRHSLELFMKIQGVTRIVIVIAPEYRDSLADVTKKDARICFAEPGKERQDSVFNGLQETALDTSLICIHDAARPLVTEQEILSCMNDALEHGAAVLAVPMKATVKESEDGKFVLRTIERSRLWEIHTPQVREKEQIIRPALLREGFKKVKELNLAVTDDVSIIEQLPAPVKITVGEYTNIKITTPEDMPMARSIL 270
BLAST of NO15G01810 vs. NCBI_GenBank
Match: GAQ79774.1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [Klebsormidium nitens]) HSP 1 Score: 209.1 bits (531), Expect = 1.300e-50 Identity = 104/197 (52.79%), Postives = 138/197 (70.05%), Query Frame = 0 Query: 20 PIHSFSHFPFHTITNTNRIVIVLDQSYRKDFA-FLQETDPRIVFADPGKERQDSVLNGFCQTLPDASIVCIHDSARPLVSQAAVLASLRDGVKHGAAVLGVPMKATVKESEDGEFVLRTINRSRLWEIQTPQVIKPDILAKAFEYVRENALEVTDDVSMVEEVGLPVKLTMGEYTNIKLTTPEDLGVAEGFLKQRAE 216 PI +S F ++ I++V D SYR+ F +Q++ + +A PGKERQDSV NG + A +VC+HDSARPL++ RDG++HGAAVLGVP+K T+KE++ G FV RT+NRS LWE+QTPQVIKPD+L + FE+VR LEVTDDVS+VE + PVK+T G YTNIK+TTPEDL +AE + + E Sbjct: 53 PIALYSLALFASLKEVGEIIVVCDPSYRQLFEDAIQKSGRTLQWASPGKERQDSVFNGLQEVRTSAGLVCVHDSARPLLTHEDARRVFRDGLRHGAAVLGVPVKQTIKEAKAGGFVARTLNRSLLWEMQTPQVIKPDLLRRGFEHVRREGLEVTDDVSIVEYLNAPVKITQGSYTNIKVTTPEDLLLAEKLIAEAEE 249
BLAST of NO15G01810 vs. NCBI_GenBank
Match: AGP04988.1 (2-C-methyl-D-erythritol 4-phosphate cytidyltransferase [Taxus wallichiana var. chinensis]) HSP 1 Score: 202.6 bits (514), Expect = 1.300e-48 Identity = 106/195 (54.36%), Postives = 134/195 (68.72%), Query Frame = 0 Query: 19 VPIHSFSHFPFHTITNTNRIVIVLDQSYRKDFAFLQET-DPRIVFADPGKERQDSVLNGFCQTLPDASIVCIHDSARPLVSQAAVLASLRDGVKHGAAVLGVPMKATVKESEDGEFVLRTINRSRLWEIQTPQVIKPDILAKAFEYVRENALEVTDDVSMVEEVGLPVKLTMGEYTNIKLTTPEDLGVAEGFLKQ 213 VPI +S F F I I+ V D SYR F +E+ + FA PGKERQDSV NG + P A +VC+HDSARPLVS V L+D HGAAVLGVP+KAT+KE+ + FV++T++R LWE+QTPQV+KP +L K FE V+ ++LEVTDDVS+VE + PV +T G YTNIK+TTP+DL VAE L Q Sbjct: 118 VPIALYSFFTFGRIPEVKEIIAVCDSSYRDIFQDAKESVMVNLKFASPGKERQDSVYNGLQEIDPLADLVCVHDSARPLVSPEDVEKVLQDAWVHGAAVLGVPVKATIKEANNDSFVVKTLDRQMLWEMQTPQVVKPGLLRKGFELVQRDSLEVTDDVSIVEHLKHPVYITQGSYTNIKVTTPDDLLVAERILNQ 312
BLAST of NO15G01810 vs. NCBI_GenBank
Match: XP_005649705.1 (2-C-methyl-D-erythritol 4-phosphate cy [Coccomyxa subellipsoidea C-169] >EIE25161.1 2-C-methyl-D-erythritol 4-phosphate cy [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 202.2 bits (513), Expect = 1.600e-48 Identity = 102/196 (52.04%), Postives = 138/196 (70.41%), Query Frame = 0 Query: 20 PIHSFSHFPFHTITNTNRIVIVLDQSYRKDFAFLQE---TDPRIVFADPGKERQDSVLNGFCQTLPDASIVCIHDSARPLVSQAAVLASLRDGVKHGAAVLGVPMKATVKESEDGEFVLRTINRSRLWEIQTPQVIKPDILAKAFEYVRENALEVTDDVSMVEEVGLPVKLTMGEYTNIKLTTPEDLGVAEGFLKQ 213 PI +S ++ +VIV D SYR+ F + P +VFA+PGKERQDSV NGF + PD+ +V IHDSARPLV+ V L+DG++ GAAVLGVP+K T+KE + V++T+ R+ LWE+QTPQVI+P +L + FE VRE +LEVTDDVS++E +G PV++T G YTNIK+TTP+D+ VAE FL + Sbjct: 54 PIAMYSLQTMSSMPEIGEVVIVCDPSYRELFQGYYDRLPVKPLLVFAEPGKERQDSVYNGFAASNPDSVLVAIHDSARPLVTVQDVRRCLKDGLEVGAAVLGVPVKPTIKEVDSDRNVVKTLARAALWEVQTPQVIRPALLKEGFELVREKSLEVTDDVSIIEALGRPVRVTQGSYTNIKVTTPDDMSVAERFLSE 249
BLAST of NO15G01810 vs. NCBI_GenBank
Match: OAY73953.1 (2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, chloroplastic [Ananas comosus]) HSP 1 Score: 201.1 bits (510), Expect = 3.700e-48 Identity = 103/196 (52.55%), Postives = 132/196 (67.35%), Query Frame = 0 Query: 20 PIHSFSHFPFHTITNTNRIVIVLDQSYRKDFA-FLQETDPRIVFADPGKERQDSVLNGFCQTLPDASIVCIHDSARPLVSQAAVLASLRDGVKHGAAVLGVPMKATVKESEDGEFVLRTINRSRLWEIQTPQVIKPDILAKAFEYVRENALEVTDDVSMVEEVGLPVKLTMGEYTNIKLTTPEDLGVAEGFLKQRA 215 PI +S + F ++ IV+V D SY+ F +++ I FA PGKERQDSV NGF + D+ +VCIHDSARPL S + LRDG +GAAVLGVP+KAT+KE+ FV++T++R LWE+QTPQVIKPD+L FE V LEVTDDVS+VE + PV +T G YTNIK+TTP+DL +AE L A Sbjct: 106 PIALYSFYTFSQMSEVKEIVVVCDPSYKDVFEDVIEDVQVNIKFALPGKERQDSVFNGFQEIDRDSELVCIHDSARPLASSGDIRKVLRDGWLNGAAVLGVPVKATIKEANSDSFVVKTLDRKTLWEMQTPQVIKPDLLRAGFELVNREGLEVTDDVSIVEHLKHPVYITEGSYTNIKVTTPDDLLLAERILNMNA 301
BLAST of NO15G01810 vs. NCBI_GenBank
Match: ABU48538.1 (2-C-methyl-D-erythritol 4-phosphate cytidyltransferase [Taxus x media]) HSP 1 Score: 199.5 bits (506), Expect = 1.100e-47 Identity = 105/195 (53.85%), Postives = 133/195 (68.21%), Query Frame = 0 Query: 19 VPIHSFSHFPFHTITNTNRIVIVLDQSYRKDFAFLQET-DPRIVFADPGKERQDSVLNGFCQTLPDASIVCIHDSARPLVSQAAVLASLRDGVKHGAAVLGVPMKATVKESEDGEFVLRTINRSRLWEIQTPQVIKPDILAKAFEYVRENALEVTDDVSMVEEVGLPVKLTMGEYTNIKLTTPEDLGVAEGFLKQ 213 VPI +S F F I I+ V D SYR F +E+ + FA PGKERQDSV NG + P A +VC+HDSARPLVS V L+D HGAAVLGV +KAT+KE+ + FV++T++R LWE+QTPQV+KP +L K FE V+ ++LEVTDDVS+VE + PV +T G YTNIK+TTP+DL VAE L Q Sbjct: 117 VPIALYSFFTFARIPEVKEIIAVCDSSYRDIFEDAKESVMVNLKFASPGKERQDSVYNGLQEIDPLADLVCVHDSARPLVSPKDVEKVLQDAWVHGAAVLGVSVKATIKEANNDSFVVKTLDRQMLWEMQTPQVVKPGLLRKGFELVQRDSLEVTDDVSIVEHLKHPVYITQGSYTNIKVTTPDDLLVAERILNQ 311 The following BLAST results are available for this feature:
BLAST of NO15G01810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01810 ID=NO15G01810|Name=NO15G01810|organism=Nannochloropsis oceanica|type=gene|length=1674bpback to top protein sequence of NO15G01810.2 >NO15G01810.2-protein ID=NO15G01810.2-protein|Name=NO15G01810.2|organism=Nannochloropsis oceanica|type=polypeptide|length=219bpback to top protein sequence of NO15G01810.1 >NO15G01810.1-protein ID=NO15G01810.1-protein|Name=NO15G01810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=301bpback to top Synonyms
Publications
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