NO15G01780, NO15G01780 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO15G01780
Unique Name	NO15G01780
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	5461
Alignment location	chr15:507898..513358 -

Link to JBrowse

Properties


Property Name	Value
Description	Seryl-trna synthetase

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr15	genome	chr15:507898..513358 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
PRJNA769958	2024-08-13
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
PXD016054	2021-01-14
PXD016699	2021-01-08
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
PXD010030	2020-03-16
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PXD008721	2019-04-30
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006418	tRNA aminoacylation for protein translation
GO:0006434	seryl-tRNA aminoacylation
GO:0006412	translation
GO:0006139	nucleobase-containing compound metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0004812	aminoacyl-tRNA ligase activity
GO:0005524	ATP binding
GO:0004828	serine-tRNA ligase activity
GO:0000166	nucleotide binding
GO:0003824	catalytic activity
GO:0000166	nucleotide binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0005737	cytoplasm

Vocabulary: **INTERPRO**
Term	Definition
IPR036282	Glutathione-S-Trfase_C_sf
IPR010978	tRNA-bd_arm
IPR009068	S15_NS1_RNA-bd
IPR006195	aa-tRNA-synth_II
IPR015866	Ser-tRNA-synth_1_N
IPR002314	aa-tRNA-synt_IIb_cons-dom
IPR000738	WHEP-TRS
IPR002317	Ser-tRNA-ligase_type_1

Homology

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BLAST of NO15G01780 vs. NCBI_GenBank
Match: EWM22412.1 (seryl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 974.5 bits (2518), Expect = 1.800e-280
Identity = 507/704 (72.02%), Postives = 553/704 (78.55%), Query Frame = 0

Query:   68 MKAKQECKDLVVQIQDYDKKVLEMDKAVKVAKDELDRLLPKIGNIVDDTVPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQPPYFMNKDVMAGVAQLEQFDEELYKVSGDDDKYLIATSEQPLCGFHKGEWLEEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEVSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTRTICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVREARKDGATAKAADKKTKKVAVPAKGTXXXXXXXXXXXXQPAAG------GVLSEAEKLGEAIAAKGEEIRQLKTKKADKATIQSAVNELLALKSEYKKVTGGEYAPPGTVHAE--KPAATAAKAPSTSTPSSLPPSNGFTNEAAEIAEAIAAKGEEIRKLKAAKRDKQALAPHIADLLSLKEKFKSITGKDFAAPNSAAAGEVGETNSKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEVAVAVESIKGPLFDRSGKPDLVNLNAYLQTRSYIQGFVPSQEDNMVAAAVIDMQKDKGGNGGVDKGNYPHLSRWLRHVGAVPVSERVAW 764
            MKAK+EC+DLV +IQ++DK+VLEMD+AVK AK+E+D+LLPKIGNIVDD+VPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMAL+NYGVSFLRAR+YSVLQPPYFMN+DVMAGVAQLEQFDEELYKV+GDD+KYLIATSEQPLCGFHKGEWLEEK+LPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLE SQK+QEEMI+AAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYD YRELVSCSNCTDYQSRSMEIRCG KKVGQEGKKYVHMLNSTLCACTRTICAILENFQ  +G+RVPEVLVPFMGGLTFLPFVRE RKD ATAKAADKK KK A P KG              PA G      G  SE E+L  AIAAKGEEIRQLK KKADKAT+Q  V  LL+LK +YK  TG EYA P    A+  KPA  A   P         PS G   E A + EAI AKGEEIR LKA K DK+ L PHIA+LL+LK K+K++TG DF AP   +AG     + K                                       + A+E ++GP+ D +GKP L NLN YLQTRSYI+GFVPSQEDN+VA AVI M+KD     GVDK  YPHLSRWLRHVGAV  +ER+AW
Sbjct:    1 MKAKEECRDLVTKIQEFDKQVLEMDRAVKAAKEEVDKLLPKIGNIVDDSVPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALVNYGVSFLRARKYSVLQPPYFMNRDVMAGVAQLEQFDEELYKVTGDDEKYLIATSEQPLCGFHKGEWLEEKTLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEASQKMQEEMIIAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDAYRELVSCSNCTDYQSRSMEIRCGTKKVGQEGKKYVHMLNSTLCACTRTICAILENFQVKDGIRVPEVLVPFMGGLTFLPFVREGRKDAATAKAADKKPKKTAAP-KG------------MAPAVGKAQNGTGTPSETEELANAIAAKGEEIRQLKLKKADKATVQPHVETLLSLKRDYKAATGEEYAAPSAGQAQNPKPAVRALNPPPL-------PSTGNAGEGAGVEEAITAKGEEIRALKARKADKETLGPHIAELLNLKAKYKALTGADFVAP---SAGSTSVHDKKV-----AASQTSPKVVSTSIPSTKNKTGTNKAEHVAGRNSGAIEDVQGPILDATGKPILANLNTYLQTRSYIRGFVPSQEDNVVAVAVISMEKD-----GVDKVRYPHLSRWLRHVGAVSSAERMAW 671

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BLAST of NO15G01780 vs. NCBI_GenBank
Match: CBJ31293.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 656.8 bits (1693), Expect = 8.500e-185
Identity = 362/646 (56.04%), Postives = 436/646 (67.49%), Query Frame = 0

Query:    1 MPIDINLLRADRGGDPDLVRESQRRRFASVELVDQVLAKDAEWRKLINDSEATRKARNAVQAEVSKKMKAKQECKDLVVQIQDYDKKVLEMDKAVKVAKDELDRLLPKIGNIVDDTVPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQPPYFMNKDVMAGVAQLEQFDEELYKVSGD--DDKYLIATSEQPLCGFHKGEWLEEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEVSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTRTICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVREARKDGATAKAADK-----KTKK-------------VAVPAKGTXXXXXXXXXXXXQPAAGGVLSEAEKLGEAIAAKGEEIRQLKTKKADKATIQSAVNELLALKSEYKKVTGGEYAPPGTVHAEKPAATAAKAPSTSTPSSLPPSNGFTNEAAEIAEAIAAKGEEIRKLKAAKRDKQALAPHIADLLSLKEKFKSITGKDFAAPNSAA 627
            MP+DIN+ R     +PDL+RESQRRRF  VE+VD+V+  D +WR+  +  +   K RN  Q EV+K  KA  E  +   +I++  K+V  ++  +     ++ +LLPKIGNIV D VPVS DEE D +VV T+G   TG+  +HHH++L RIGG+EPERG  VAGHR YFLRDAGLLLN ALINYG++FLR R YSVLQPPYFM+KDVMAGVAQLEQFDEELYKVSG   ++KYLIATSEQP+C FHKGEWL E  LPLRYGGVSTCFRKEAGAHGKD WGIFRVHQF+KVEQF +CEGDLE S  +Q EM  A+E+FYQSLGI+YRVVNIVSGELNNAAIKK+DLE WFP Y+ +RELVSCSNCTDYQSR ME+R G KK+GQ  KK+VHMLNSTLCA TRT+  ILEN+QTP GV VPEVLVPFMGG+TFL +V+E  K    AK A K       KK                     X           + A GG  SEA+ + + I AKG EIR LK  K DKAT++  ++ LLALK+EYK+ TG +YAP                                  A      I AKG+EIR+LK +K DK  + PHI  L++LK ++K  TGK + AP + A
Sbjct:    1 MPLDINMFRR----EPDLIRESQRRRFQPVEIVDEVIDLDTKWRESRSRIDFLNKDRNRYQKEVTKAKKAGGEDPENAAKIKEVAKEVKIVEAKMVELSQQVSKLLPKIGNIVADDVPVSNDEEKDNKVVSTFGPTPTGEKYMHHHEVLHRIGGYEPERGVGVAGHRAYFLRDAGLLLNQALINYGIAFLRKRNYSVLQPPYFMSKDVMAGVAQLEQFDEELYKVSGSGTEEKYLIATSEQPICAFHKGEWLGESELPLRYGGVSTCFRKEAGAHGKDTWGIFRVHQFEKVEQFCICEGDLEKSAAMQVEMSKASEEFYQSLGISYRVVNIVSGELNNAAIKKYDLEAWFPAYEEFRELVSCSNCTDYQSRGMEVRSGHKKMGQVEKKFVHMLNSTLCATTRTMSCILENYQTPTGVTVPEVLVPFMGGITFLDYVKELPKGKREAKGATKGGYATSAKKPXXXXXXXXXXXXXXXXXXXXXAESSARGLPGLEEAKGG--SEADAIADKITAKGLEIRDLKKSKPDKATLKPHIDTLLALKTEYKEKTGKDYAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA-----KIVAKGDEIRELKKSKPDKATIQPHIDALIALKTQYKDETGKAYVAPGATA 635

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BLAST of NO15G01780 vs. NCBI_GenBank
Match: XP_008879585.1 (serine-tRNA ligase [Aphanomyces invadans] >ETV91659.1 serine-tRNA ligase [Aphanomyces invadans])

HSP 1 Score: 578.6 bits (1490), Expect = 2.900e-161
Identity = 294/461 (63.77%), Postives = 353/461 (76.57%), Query Frame = 0

Query:    1 MPIDINLLRADRGGDPDLVRESQRRRFASVELVDQVLAKDAEWRKLINDSEATRKARNAVQAEVSKKMKAKQECKDLVVQIQDYDKKVLEMDKAVKVAKDEL----DRLLPKIGNIVDDTVPVSQDEEADTEVVRTWGTPVTGDDLLH-HHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQPPYFMNKDVMAGVAQLEQFDEELYKVSG---DDDKYLIATSEQPLCGFHKGEWLEEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEVSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTRTICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVREARKDGATAKAADKKTKK 454
            MPIDINLLR +RGG+P+LVRESQR+RFA V+LVD+V+A D  WRK   D E  +   N +QA +    KAK+  KD   ++ +  KK+ E + A+K+  D L    DR L KIGNIVD +VP+SQ+E+ D  V  TWGT    DD LH HH++L RI G+EPE+G  VAGHRGYFL+  G++LN ALI YG  FL  R+Y++LQPP+FMNKDVMAGVAQL +FDE LYKV+G   +D+KYLIATSEQP+CGFHKGEW+ E +LP+RY G STCFRKEAG+HGKD WGIFRVHQF+KVEQFV+CE   E S  + +E++  AE FYQSLG+ YRV+NIVSGELNNAAIKKFDLE WFP Y  +RELVSCSNCTDYQSR+MEIRCG KK+ Q  KKYVH+LN+TLCA TRTI  ILENFQTPEGVRVPEVLVPFMGG+TFLPFV E + +    K     +KK
Sbjct:    1 MPIDINLLRVERGGNPELVRESQRKRFADVDLVDRVIALDEAWRKKQGDLETVKMNMNRLQATIKDLYKAKK--KDEAQELVEQRKKLEESEPALKLEADALKEVVDRELYKIGNIVDSSVPISQNED-DNVVTGTWGTCRPHDDSLHYHHEVLHRIDGYEPEKGVQVAGHRGYFLKGYGVMLNQALIMYGQQFLMKRKYTLLQPPFFMNKDVMAGVAQLSEFDEALYKVTGADANDEKYLIATSEQPMCGFHKGEWITESALPIRYAGTSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVLCEP--EQSPAMLDELLATAEAFYQSLGLPYRVINIVSGELNNAAIKKFDLEAWFPAYSEFRELVSCSNCTDYQSRAMEIRCGIKKMNQTEKKYVHLLNATLCATTRTISCILENFQTPEGVRVPEVLVPFMGGVTFLPFVNEPKANTNALKMEKAASKK 456

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BLAST of NO15G01780 vs. NCBI_GenBank
Match: XP_009840179.1 (serine-tRNA ligase [Aphanomyces astaci] >ETV70467.1 serine-tRNA ligase [Aphanomyces astaci])

HSP 1 Score: 577.0 bits (1486), Expect = 8.500e-161
Identity = 294/461 (63.77%), Postives = 353/461 (76.57%), Query Frame = 0

Query:    1 MPIDINLLRADRGGDPDLVRESQRRRFASVELVDQVLAKDAEWRKLINDSEATRKARNAVQAEVSKKMKAKQECKDLVVQIQDYDKKVLEMDKAVKVAKDEL----DRLLPKIGNIVDDTVPVSQDEEADTEVVRTWGTPVTGDDLLH-HHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQPPYFMNKDVMAGVAQLEQFDEELYKVSG---DDDKYLIATSEQPLCGFHKGEWLEEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEVSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTRTICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVREARKDGATAKAADKKTKK 454
            MPIDINLLR +RGG+P+LVRESQR+R+A V+LVD+V+A D  WRK   D E  +   N +QA +    KAK+  KD   ++ D  K++ E + A+K+  D L    DR L KIGN+VD +VP+SQ+E+ D EV  TWGT    DD LH HH++L RI G+EPE+G  VAGHRGYFL+  G++LN ALI YG  FL  R+Y++LQPPYFMNKDVMAGVAQL +FDE LYKV+G   +D+KYLIATSEQP+CGFHKGEW+ E +LP+RY G STCFRKEAG+HGKD WGIFRVHQF+KVEQFV+CE   E S  + +EM+  AE FYQSLG+ YRV+NIVSGELNNAAIKKFDLE WFP Y  +RELVS SNCTDYQSR+MEIRCG KK+ Q  KKYVH+LN+TLCA TRTI  ILENFQTPEGVRVPEVLVPFMGG+TFLPFV E + +    K     +KK
Sbjct:    1 MPIDINLLRTERGGNPELVRESQRKRYADVDLVDRVIALDEAWRKKQGDLETLKMNMNRLQATIKDLYKAKK--KDEAQELVDQRKRLEESEPALKLEADALKEVVDRELYKIGNLVDPSVPISQNED-DNEVTATWGTCRAHDDSLHYHHEVLHRIDGYEPEKGVQVAGHRGYFLKGYGVMLNQALIMYGQQFLMKRKYTLLQPPYFMNKDVMAGVAQLSEFDEALYKVTGADANDEKYLIATSEQPMCGFHKGEWITESALPIRYAGSSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVLCEP--EHSPAMLDEMLATAEAFYQSLGLPYRVINIVSGELNNAAIKKFDLEAWFPAYAEFRELVSASNCTDYQSRAMEIRCGIKKMNQTEKKYVHLLNATLCATTRTISCILENFQTPEGVRVPEVLVPFMGGVTFLPFVNEPKANTNALKMEKAASKK 456

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BLAST of NO15G01780 vs. NCBI_GenBank
Match: XP_008605021.1 (seryl-tRNA synthetase [Saprolegnia diclina VS20] >EQC41307.1 seryl-tRNA synthetase [Saprolegnia diclina VS20])

HSP 1 Score: 571.6 bits (1472), Expect = 3.600e-159
Identity = 290/459 (63.18%), Postives = 352/459 (76.69%), Query Frame = 0

Query:    1 MPIDINLLRADRGGDPDLVRESQRRRFASVELVDQVLAKDAEWRKLINDSEATRKARNAVQAEVSKKMKAKQ--ECKDLVVQIQDYDKKVLEMDKAVKVAKDELDRLLPKIGNIVDDTVPVSQDEEADTEVVRTWGTPVTGDDLLH-HHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQPPYFMNKDVMAGVAQLEQFDEELYKVSG---DDDKYLIATSEQPLCGFHKGEWLEEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEVSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTRTICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVREARKDGATAKAADKKTKK 454
            MPIDIN LR +RGG+PD+VRESQ++RFASV+LVDQV+A D EWRK   + E T+   NA+QA++   +KAK+  E + L+ + +D           V   K  +DR L KIGN+VD TVPVSQ+E+ D EVV TWG     DD LH HH++L RI G+EPE+G AVAGHR YFL+  G++LN ALI YG +FL  R+Y++LQPPYFM+K+VMAGVAQL +FDE LYKV+G    D+KYLIATSEQP+CGFHK EW+ E SLP+RY G STCFRKEAG+HGKD WGIFRVHQF+KVEQFV+CE   E S ++ +EMI  AE FYQSLG+ YRV+NIVSGELNNAA KK+DLE WFP Y  +RELVS SNCTDYQ+R+MEIRCG KK+ Q  KKYVH+LN+TLCA TRTIC ILEN QTPEGVRVP+VLVPFMGG+TFLPFV++A+ +    K      KK
Sbjct:   41 MPIDINQLRVERGGNPDIVRESQKKRFASVDLVDQVIALDEEWRKKTGEWETTKMNINALQAQIKDLIKAKKQAEAQPLIQKRKDLAASEPAAKAEVDALKLVVDRELSKIGNLVDPTVPVSQNED-DNEVVATWGACRPHDDALHFHHEVLHRIDGYEPEKGVAVAGHRAYFLKGYGVMLNQALIMYGQAFLMNRKYTLLQPPYFMSKEVMAGVAQLSEFDEALYKVTGADPSDEKYLIATSEQPMCGFHKDEWITESSLPIRYAGSSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVLCEP--EKSDEMLQEMISTAEAFYQSLGLPYRVINIVSGELNNAATKKYDLEAWFPAYAEFRELVSASNCTDYQARAMEIRCGVKKMNQTEKKYVHLLNATLCATTRTICCILENNQTPEGVRVPDVLVPFMGGVTFLPFVQDAKVNHQAVKMQKAAAKK 496

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BLAST of NO15G01780 vs. NCBI_GenBank
Match: XP_012194611.1 (seryl-tRNA synthetase [Saprolegnia parasitica CBS 223.65] >KDO34957.1 seryl-tRNA synthetase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 568.9 bits (1465), Expect = 2.300e-158
Identity = 288/459 (62.75%), Postives = 351/459 (76.47%), Query Frame = 0

Query:    1 MPIDINLLRADRGGDPDLVRESQRRRFASVELVDQVLAKDAEWRKLINDSEATRKARNAVQAEVSKKMKAKQ--ECKDLVVQIQDYDKKVLEMDKAVKVAKDELDRLLPKIGNIVDDTVPVSQDEEADTEVVRTWGTPVTGDDLLH-HHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQPPYFMNKDVMAGVAQLEQFDEELYKVSG---DDDKYLIATSEQPLCGFHKGEWLEEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEVSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTRTICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVREARKDGATAKAADKKTKK 454
            MPIDIN LR +RGG+PD+VRESQ++RFASV+LVDQV+A D EWRK   + E  +   NA+QA++   +KAK+  E + L+ + +D               K  +DR L KIGN+VD +VPVSQ+E+ D EVV TWG     DD LH HH++L RI G+EPE+G AVAGHR YFL+  G++LN ALI YG +FL  R+Y++LQPPYFMNK+VMAGVAQL +FDE LYKV+G    D+KYLIATSEQP+CGFHK EW+ E SLP+RY G STCFRKEAG+HGKD WGIFRVHQF+KVEQFV+CE   E S+++ +EMI  AE FYQSLG+ YRV+NIVSGELNNAA KK+DLE WFP Y  +RELVS SNCTDYQ+R+MEIRCG KK+ Q  KKYVH+LN+TLCA TRTIC ILEN QTPEGVRVP+VLVPFMGG+TFLPFV++A+ +    K      KK
Sbjct:    1 MPIDINQLRVERGGNPDIVRESQKKRFASVDLVDQVIALDEEWRKKNGEWETMKMNINALQAQIKDLVKAKKQDEAQPLIQKRKDMAASEPAAKAEADAIKVVVDRELSKIGNLVDPSVPVSQNED-DNEVVATWGACRPHDDALHYHHEVLHRIDGYEPEKGVAVAGHRAYFLKGYGVMLNQALIMYGQAFLMKRKYTLLQPPYFMNKEVMAGVAQLSEFDEALYKVTGADPSDEKYLIATSEQPMCGFHKDEWITESSLPIRYAGSSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVLCEP--EKSEEMLQEMISTAEAFYQSLGLPYRVINIVSGELNNAATKKYDLEAWFPAYAEFRELVSASNCTDYQARAMEIRCGGKKMNQTEKKYVHLLNATLCATTRTICCILENNQTPEGVRVPDVLVPFMGGVTFLPFVQDAKVNHQAVKMQKAAAKK 456

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BLAST of NO15G01780 vs. NCBI_GenBank
Match: OQS00478.1 (seryl-tRNA synthetase [Achlya hypogyna])

HSP 1 Score: 567.8 bits (1462), Expect = 5.200e-158
Identity = 289/463 (62.42%), Postives = 358/463 (77.32%), Query Frame = 0

Query:    1 MPIDINLLRADRGGDPDLVRESQRRRFASVELVDQVLAKDAEWRKLINDSEATRKARNAVQAEVSKKMKAK--QECKDLVVQIQDYDKKVLEMDKAVKVAKDEL----DRLLPKIGNIVDDTVPVSQDEEADTEVVRTWGTPVTGDDLLH-HHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQPPYFMNKDVMAGVAQLEQFDEELYKVSG---DDDKYLIATSEQPLCGFHKGEWLEEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEVSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTRTICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVREARKDGATAKAADKKTKK 454
            MPIDIN LR +RGG+PD+VRESQ++RFASV+LVDQV+A D +WRK   D E  +   NA+Q+++   +KAK  +E + L+ +     K++  ++ A+KV  D L    +R L KIGN+VD +VPVSQ+E+ D EVV TWG     +D LH HH++L RI G+EPE+G AVAGHR YFL+  G++LN ALI YG SFL  R+Y++LQPPYFMNK+VMAGVAQL +FDE LYKV+G    D+KYLIATSEQP+CGFHK EW+ E +LP+RY G STCFRKEAG+HGKD WGIFRVHQF+KVEQFV+CE   E S+++ +EMI  AE FYQSLG+ YRV+NIVSGELNNAA KK+DLE WFP Y  +RELVS SNCTDYQ+R+MEIRCG KK+ Q  KKYVH+LN+TLCA TRTIC ILEN QTPEGVRVP+VLVPFMGG+TFLPFV++A+ +    K      KK
Sbjct:   31 MPIDINQLRVERGGNPDVVRESQKKRFASVDLVDQVIALDEQWRKKNGDWETMKMNINALQSQIKDLVKAKKQEEAQPLIQK----RKELAALEPALKVEADALKEVVERELSKIGNLVDPSVPVSQNED-DNEVVATWGACRPHEDSLHYHHEVLHRIDGYEPEKGVAVAGHRAYFLKGYGVMLNQALIMYGQSFLMQRKYTLLQPPYFMNKEVMAGVAQLSEFDEALYKVTGADPSDEKYLIATSEQPMCGFHKDEWITESALPIRYAGSSTCFRKEAGSHGKDTWGIFRVHQFEKVEQFVLCEP--EKSEEMLQEMISTAEAFYQSLGLPYRVINIVSGELNNAATKKYDLEAWFPAYAEFRELVSASNCTDYQARAMEIRCGIKKMNQTEKKYVHLLNATLCATTRTICCILENNQTPEGVRVPDVLVPFMGGVTFLPFVQDAKVNHQAVKMQKAAAKK 486

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BLAST of NO15G01780 vs. NCBI_GenBank
Match: XP_009034814.1 (hypothetical protein AURANDRAFT_23294, partial [Aureococcus anophagefferens] >EGB09961.1 hypothetical protein AURANDRAFT_23294, partial [Aureococcus anophagefferens])

HSP 1 Score: 554.7 bits (1428), Expect = 4.500e-154
Identity = 277/442 (62.67%), Postives = 330/442 (74.66%), Query Frame = 0

Query:    1 MPIDINLLRADRGGDPDLVRESQRRRFASVELVDQVLAKDAEWRKLINDSEATRKARNAVQAEVSKKMKAKQEC-KDLVVQIQDYDKKVLEMDKAVKVAKDELDRLLPKIGNIVDDTVPVSQDEEADTEVVRTWG--TPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQPPYFMNKDVMAGVAQLEQFDEELYKVSG---DDDKYLIATSEQPLCGFHKGEWLEEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEVSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTRTICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVRE 437
            MP+DI++LRA RGGDP+ VRESQRRRFA V LVD+V+A+D  WRKL  D +  +  +N  Q E++   KAK +    ++  ++  D K   ++  V+    ++ +L   IGN+V D V VSQDEE D EVV  WG   P        HH+LL+ IGG+EPERG  VAGHR YF  D G++LN A+INYG+SFLR R Y V+QPPY MNKDVMAGVAQL +FDE LYKVSG   D +KYLIATSEQP+C +HKGEWL+E  LPLRY G+STCFRKEAG+HG+D WGIFRVHQF+KVEQF +  GDLE S K+ EEM   AE++ QSLG  Y VVNIVSGELNNAAIKK+DLE WFP    +RELVSCSNCTDYQSR+MEIRCG KK+G+  KKYVHMLNSTL AC RTIC +LEN QTP GV VPEVL P+M GLTFLPFVR+
Sbjct:    1 MPLDISILRAYRGGDPEKVRESQRRRFADVGLVDKVIAEDEAWRKLTQDVDDIKAEKNKKQKEITTLKKAKADVPAQMLADLKALDAKRAAVEARVEPQAQKVKKLFSGIGNLVADDVVVSQDEEKDNEVVSRWGECAPTAAHS---HHELLYMIGGYEPERGVRVAGHRAYFFTDVGVMLNQAVINYGISFLRKRAYKVMQPPYMMNKDVMAGVAQLSEFDEALYKVSGGDADSEKYLIATSEQPICAYHKGEWLKEADLPLRYAGISTCFRKEAGSHGRDTWGIFRVHQFEKVEQFCITVGDLEESAKMHEEMKDLAEEYVQSLGFPYHVVNIVSGELNNAAIKKYDLEAWFPFQKQFRELVSCSNCTDYQSRAMEIRCGNKKMGEREKKYVHMLNSTLAACGRTICCLLENNQTPTGVHVPEVLWPYMDGLTFLPFVRD 439

[Close]

BLAST of NO15G01780 vs. NCBI_GenBank
Match: XP_009515579.1 (hypothetical protein PHYSODRAFT_537011 [Phytophthora sojae] >EGZ28304.1 hypothetical protein PHYSODRAFT_537011 [Phytophthora sojae])

HSP 1 Score: 552.4 bits (1422), Expect = 2.300e-153
Identity = 275/456 (60.31%), Postives = 335/456 (73.46%), Query Frame = 0

Query:    1 MPIDINLLRADRGGDPDLVRESQRRRFASVELVDQVLAKDAEWRKLINDSEATRKARNAVQAEVSKKMKAKQECKDLVVQIQDYDKKVLEMDKAVKVAKDELDRLLPKIGNIVDDTVPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQPPYFMNKDVMAGVAQLEQFDEELYKVSGDDDKYLIATSEQPLCGFHKGEWLEEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEVSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTRTICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVREARKDGATA---KAADKKTKK 454
            MPIDIN LR +RGGDPD VR  Q++RF  V++VD+V+A D +WRK   + E      NA+Q E+ K  KAK++ K L    +    ++ E  K     K  +D+ LPKIGN+VD TVPVS +E+ +  VV+ WG P+  D L  HH++L RI G+EPERG  VAGHR YFL   G LL  AL++Y  SFL   +Y +L+PP+FMNK+ MA VAQL+ FDE+LYKV G+D+KYLIATSEQP+CG+H+GEW+ E SLPLRYGG STCFRKEAG+HGKD WGIFRVHQFDKVEQF  C  D E S  + EEM+  AE+FYQSL + YRVVNIVSGELNNAA+KK+DLE WFP Y  YRELVS SNCTD+QSR+MEIRCG KK  Q  KKYVHMLNSTLCA TRT+C ILEN+Q   GV+VPEVLVPFMGG+T+LPF R+ + +       KAA KK+ K
Sbjct:    1 MPIDINRLRPERGGDPDAVRADQKKRFLDVDIVDKVIALDEQWRKKQGEVETISMKMNALQQEIKKLSKAKEDFKALXXXRKALAAELPEKKKEADALKLLVDQELPKIGNVVDPTVPVSSNED-ENIVVKKWGAPIQKDGLHFHHEVLHRIDGYEPERGVQVAGHRAYFLTGYGFLLEQALMSYATSFLMKAQYKMLKPPFFMNKEGMAAVAQLDDFDEQLYKVIGEDEKYLIATSEQPICGYHRGEWITESSLPLRYGGFSTCFRKEAGSHGKDTWGIFRVHQFDKVEQF--CITDPESSVAMHEEMLRHAEEFYQSLNLPYRVVNIVSGELNNAAVKKYDLEAWFPAYKEYRELVSASNCTDFQSRAMEIRCGVKKENQREKKYVHMLNSTLCASTRTVCCILENYQDENGVKVPEVLVPFMGGVTYLPFTRDVKVNVQAVKMQKAAKKKSGK 453

[Close]

BLAST of NO15G01780 vs. NCBI_GenBank
Match: CCI39631.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 550.4 bits (1417), Expect = 8.600e-153
Identity = 266/453 (58.72%), Postives = 333/453 (73.51%), Query Frame = 0

Query:    1 MPIDINLLRADRGGDPDLVRESQRRRFASVELVDQVLAKDAEWRKLINDSEATRKARNAVQAEVSKKMKAKQECKDLVVQIQDYDKKVLEMDKAVKVAKDELDRLLPKIGNIVDDTVPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLWRIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQPPYFMNKDVMAGVAQLEQFDEELYKVSGDDDKYLIATSEQPLCGFHKGEWLEEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLEVSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPGYDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTRTICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVREARKDGATAKAADKKTKK 454
            MPIDIN LR +RGGDP  V+E QR+RF S +LVD V+A D +WRK     E  +              KAK + KD+  + +    ++  + K     K+++DR L  I N VD +VP+SQ+E+ D +++RTWG   + + LL HH++L RI G+EPERG  VAGHR YFL   GLLL  AL+ Y  +FL  R+Y +++PP+F+NKD+MAGVAQL+ FDE+LYKV G+D+KYLIATSEQPLCG+HKG+W++E SLPLRYGG+STCFRKE+G+HGKD WGIFRVHQFDKVEQF + E   E S ++ EEM+  AEDFYQSL ++YRVVNIVSGELNNAA+KK+DLE WFP Y  YRELVSCSNCTDYQ+R+MEIRCG KK  Q  KKYVHMLNSTLCA TRT+C ILEN Q   GV+VP VL+PFMGG+T++PFVRE +K+    K      KK
Sbjct:    1 MPIDINRLRVERGGDPVKVKEDQRKRFVSADLVDDVVALDEQWRKKQGQVETMQMNXXXXXXXXXXXXKAKMDFKDISEERKHLAAQIPGLKKEADALKEQVDRKLATIANTVDPSVPISQNED-DNQIIRTWGQRTSKEGLLFHHEVLHRIDGYEPERGVQVAGHRAYFLTGYGLLLEQALLQYATAFLMQRQYKMIKPPFFINKDIMAGVAQLDDFDEQLYKVEGEDEKYLIATSEQPLCGYHKGDWIQESSLPLRYGGLSTCFRKESGSHGKDTWGIFRVHQFDKVEQFCITEP--ENSTEMHEEMLKHAEDFYQSLNLSYRVVNIVSGELNNAAVKKYDLEAWFPAYKEYRELVSCSNCTDYQARAMEIRCGIKKENQREKKYVHMLNSTLCASTRTVCCILENNQDENGVKVPHVLIPFMGGVTYMPFVREIKKNLQAIKMKKAAKKK 450

The following BLAST results are available for this feature:

BLAST of NO15G01780 vs. NCBI_GenBank

BLAST of NO15G01780 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM22412.1	1.800e-280	72.02	seryl-trna synthetase [Nannochloropsis gaditana]	[more]
CBJ31293.1	8.500e-185	56.04	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_008879585.1	2.900e-161	63.77	serine-tRNA ligase [Aphanomyces invadans] >ETV9165...	[more]
XP_009840179.1	8.500e-161	63.77	serine-tRNA ligase [Aphanomyces astaci] >ETV70467....	[more]
XP_008605021.1	3.600e-159	63.18	seryl-tRNA synthetase [Saprolegnia diclina VS20] >...	[more]
XP_012194611.1	2.300e-158	62.75	seryl-tRNA synthetase [Saprolegnia parasitica CBS ...	[more]
OQS00478.1	5.200e-158	62.42	seryl-tRNA synthetase [Achlya hypogyna]	[more]
XP_009034814.1	4.500e-154	62.67	hypothetical protein AURANDRAFT_23294, partial [Au...	[more]
XP_009515579.1	2.300e-153	60.31	hypothetical protein PHYSODRAFT_537011 [Phytophtho...	[more]
CCI39631.1	8.600e-153	58.72	unnamed protein product [Albugo candida]	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL142	nonsL142	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR006	ncniR006	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR063	ngnoR063	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK001393	NSK001393	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO15G01780.1	NO15G01780.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|541165	gene_4728	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100067g2	gene8026	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO15G01780.1	NO15G01780.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO15G01780 ID=NO15G01780|Name=NO15G01780|organism=Nannochloropsis oceanica|type=gene|length=5461bp
TGCTTTCTACTGCTCCTTCACAGCACTTACTTCCGTGTCTACATCTTTTT
CTCAAATTACTGTGGTTTCTTTCCTTTCACTATTTCTGCTTTCTTTCCTT
TTTAATTTCTTTCTCTCTCACAATGTGTGTGGATATATGTCTCTGTGCGT
CTGCCACCCTTTCTCTATCCCGTGTTGTACATGAGCCCTCCTTCCTCCCT
TCCCTCTCTACAACGTCTTTCCTCCCCTCTTCATATCTTTTTCCTCAAAT
TGCCTATCAAAATCCTCTAAATCCTTTGTCATCTTATCCATTCCCTGCCG
CTCTGCCATACTCCCCGAGCTACTGTACGTCATATCCTCTTTCCTCACCA
CCTTCATTTTAGATCGGTAGTGTCTTGCCGATAAAATTTTCTCGTACAGT
GGCCCAACAGCTCTCTCCAAAATCACCGCCCATGCTTGCCTTGCCTCGTT
TCGCTGTAAAATTTCTTTATTCTTCGCGTTGACCCACCGAGAACGCAAGA
AAGGGATCAGGTTGAATCCGACCGCGTACACAAGGAGGGCGGGGTAGAGG
GCTTGGCTCAACCCAAGGATACCCGGCAAGGGGGTGTTTGCTCCGTAGAC
AGACGCATAGTTTCTCAATACATCGCCTAACACGATCGCCCCCCCCAAAT
TTGCCACCCCCAAAATACCAGCAAATAATCGGTTGGTCCCAGGGGCGAGT
GAGAAGGGAATGGGATTCTCTTCGAGGTAGGAAGCAGTGCCAACAGCTTG
TGCAGTCGAAGGAGCGGAGAGAAGAAAGCCTTTGAGTCGTTCAAGCAACG
ACGCTTTGTCAAAGCAATCTTGCACTGGGACCCGCTTCGCTTGCAAAGCT
TCCCTCAACTCAAATGCCGTCAACCCCTGATACCCCCTCACCTCCTCATC
CACCCTCTCTTGCCTCGCCCAGTTCGCATTCAGCATCTCCCTTCCTCCCT
CTCCCCCCGGGGCCGCCGCCGTGGTCATCAAGTCAGGGAAAACATACACA
ATCTCTCCCTCTGCCGTGACTTCCGGCCGACCATTCAATCTTGTCAGAAC
CGGCAAGACAAACGATTCGTCTACCACCGCAGTCAGAGGCCCTCCTCCCG
ACATCGCATAGCCCGTGGGATCCTTCGGCGCTGGCACATCAAGATAAGGT
GCTAGCTGCTCCGCCACCACTGCTCCTCCACTCCGTCTTATGACACCCGC
AATCTCCGTGTACCTCACCTCCTCCAGCCCCACATTTGGATTTCCATCCC
CAAAAATGTATGAAAAACAACTCTCCAAAAACCCCATCTCCACCGGCGCC
CCCTCATCTCTTCCTCTCTGCCTCTGCCCTCCATAGCCGTAGTAATAACC
ATACGGCCGATACATAAAAAAGTCAAACGGGCTAGGCCCAAAGTACATTC
CCATCCCTCCTCCGAACCCTCCCCCTCTCTCCCTCCTTCGGTCATCGTCG
CGATCTCCCTCTTGCGACGCGGACCCCGCAAAGGTAATGGTTGCAAAGAC
CAACACGATCGACAACACTAAACACAAACCAAAAGACACCCTTGTTGCGT
AAAACAACGACGGCCATACCTTAATCCAAAGCTCCTTTGCTTGCTGCGTA
ATCGATCGTGTCCTCAGAGCAGTCCGAAAATTCCTCGGGAAGTTGTAAAC
CAAATCTCCATCCTTCCCCACTTCCAGATCACCCTCCACCAGCGCCGCCA
GCTTGACCAGCCCCTTCTGCGCAGTTAAGAGGTCGACACCGGCCAACGCT
GCGACGTCTTGAACCGTGACTCGACCGCCGGCTTTTTCGACGGCGGCGAG
GACCTTCTCTGGAGGGGGGATGGCGAGCTGTTCTGCTTGAGGCAAGTTGC
CTGCGCCGAGTTGCGTTTTCGGCCGACGAGAGGAGTGAGGCCAGATATGT
ATGGTGCAGAGACGATTTCGCTGGGTGTCCTGCAGCATTGCTGACGGGGT
GGAGGAGGTGAAGGGGGAAAACGGAACAAAGGAGAGGGGGCGTAGCGGCG
CTGACAGTCTAAACGCCCAGGACTCGGAAGGCAGAAAAGCCAAGACAAGG
GCAGCCATTAGCAGCGCTGCGGTTGCAGCCAGCTGCAGCTTTCGCGATCT
TCTTGGCATGCTTGGTGGTCTAGCTCTGGGTTGGTCTTATGGAAGGTGAA
GTTGTGAGATGAGCTTGCATGTAAATAGGTAGGGAAAGGGTGCGATGCCT
TCTTGGAGCAATGGCGACAAAACAACAGCTACGACAAGCCCATTTGAAAC
GATTCCACGACTCCGCGGTGTAATCCATGCCTTTCTGAACGCATGTTTTT
TTTTTGAGTGATTCACATTGCGAAGGGCGAGGAGGAAGGGGCTCTCTGTC
ATCTGAGTGAAAATGGCCTTGGATGACGCGAGGTTTCTTGCGCAGGCTTT
TCTGTGACAACTCGCTTGCCACCGGCTCATCCCACCCACACATAGTATTG
TCTACCAGACGACAGGATGTCATGGTTTCCCCCCTTCGTAGCAGTCGGTT
TTTCGGGAGCGAGTCTGCACTTAAAAGCCGTGCTCACGCAGACATCATCA
TCTTTCGCCGAGGAAGAAATCAGCAACGTTTCAACGCCATCAACCTCCAT
TGCACACCACAGGTCAGGTCAACCAAGCACTGATAGCCGCCCGGGCACAT
GCCTATTGACATCAACCTGCTGCGGGCCGATCGCGGGGGAGACCCGGACC
TTGTGCGTGAGTCCCAACGCAGGCGCTTCGCGTCCGTCGAACTCGTGGAC
CAAgtgagaaaagagggggacaggggaatgcacatgacacacacacaccg
cgcacgcatgcaaacaaccgtgccttatcaacataatgtatgttcgcata
tatgtactgaagtgcttttaccccctgtctccgcttccttgtacggcagG
TGCTAGCCAAGGACGCGGAATGGCGCAAGCTGATCAACGACTCTGAGGCC
ACACGCAAGGCCCGCAATGCTGTGCAAGCCGAGGTCTCGAAGAAAATGAA
AGCCAAGCAAGAGTGCAAGGACTTGGTGGTCCAAATTCAGGATTACGATA
AAAAGGTGCTGGAGATGGACAAGGCGGTCAAGGTGGCCAAGGACGAGCTT
GATCGGCTCCTGCCGAAGATTGGGAACATTGTGGATGACACgtaagtccc
tttctttcttcctgatgcgtggttacatctgaataaattactacgactct
gagcaggggtattttctccagcctatcacaccaaccatcttctttccttc
cctccctcgcacccttcctccctccctccctccgaagAGTCCCTGTCTCT
CAAGACGAAGAAGCAGACACCGAGGTGGTCCGCACATGGGGCACACCTGT
GACGGGGGATGATCTACTGCATCACCACGATTTGCTTTGGCGCATTGGTG
GTTTTGAGCCCGAGCGAGGGAGTGCTGTGGCAGGTCATCGAGGATATTTC
TTGCGAGATGCGGGGTTATTGCTGAATATGGCTCTGATAAATTATGGGGT
TTCGTTTCTGAGGGCGAGGGAGTATAGCGTGCTGCAGCCACCGTATTTTA
TGAACAAGGATGTGATGGCGGGGGTGGCGCAATTGGAACAATTTGACGAG
GAGTTGTACAAGGTGAGTGGGGATGATGACAAGTACCTCATTGCGACCAG
CGAGCAGCCTTTGTGTGGTTTTCACAAGGGGGAGTGGTTGGAGGAGAAGA
GCCTACCATTGAGGTATGGCGGCGTGTCAACGTGTTTTAGGAAGGAGGCG
GGGGCACATGGGAAGGATTGTTGGGGCATTTTTCGGGTGCATCAATTTGA
TAAGGTCGAGCAATTTGTAGTTTGCGAAGGGGATTTGGAGGTGAGTCAGA
AGATACAAGAGGAGATGATCTTGGCGGCGGAAGATTTTTACCAGAGTCTG
GGGATTGCGTATCGGGTGGTCAATATTGTGAGTGGGGAGCTTAATAATGC
GGCGATCAAGAAGTTTGATCTGGAGGGGTGGTTCCCGGGTTATGACACGT
ACCGGGAGTTGGTCTCGTGCTCGAATTGCACGGACTACCAGAGTCGAAGC
ATGGAAATTAGGTGTGGCGCGAAGAAAGTAGGACAAGAGGGGAAGAAGTA
CGTGCATATGCTCAATTCGACGTTGTGCGCTTGCACTCGAACAATTTGTG
CCATCTTGGAGAATTTCCAGACCCCGGAGGGTGTGAGGGTGCCTGAGGTC
CTTGTTCCATTTATGGGCGGGTTGACTTTCCTGCCTTTTGTCCGCGAAGC
ACGCAAGGATGGTGCCACAGCCAAGGCTGCTGATAAGAAGACGAAGAAGG
TGGCGGTCCCGGCGAAGGGCACGGCAGCAGCAGTGGCGGCTGCTGCTGCT
GGCAAGGGTCAGCCAGCAGCAGGAGGAGTACTTTCCGAAGCGGAGAAATT
GGGGGAGGCCATCGCGGCCAAGGGCGAAGAGATCCGTCAGCTCAAGACGA
AGAAGGCAGATAAAGCGACCATCCAATCGGCGGTCAACGAACTGCTTGCC
CTCAAAAGTGAGTACAAAAAGGTGACCGGAGGAGAGTACGCCCCTCCAGG
GACCGTCCATGCCGAGAAGCCGGCCGCCACTGCCGCCAAGGCTCCCTCAA
CCTCCACCCCTTCCTCCCTCCCTCCCTCCAATGGCTTCACAAACGAAGCG
GCCGAGATCGCAGAGGCGATTGCAGCGAAGGGAGAGGAGATCCGAAAGCT
CAAGGCCGCTAAGAGAGACAAGCAAGCGTTAGCTCCCCACATCGCCGATC
TCCTCTCTTTGAAAGAAAAGTTCAAGTCCATCACCGGGAAGGATTTTGCC
GCCCCCAATTCAGCAGCAGCAGGGGAAGTAGGAGAAACAAACAGCAAGGC
AGCTTCGCAGCAAGCAGCAAGAGCAAAGCAGGCGTCTGCATCGGTCCAAA
AGAAGGCAGCTGCAGAGGCACCAGCAGCGCCAAGCGCACAAGGAGGGAAT
GGAGGGTCTGAAGTAGCAGTAGCAGTGGAGAGTATCAAGGGTCCTCTCTT
CGATAGAAGCGGAAAGCCGGATCTGGTCAATCTCAATGCATACTTGCAAA
CACGAAGTTACATCCAAGGGTTTGTGCCCAGTCAAGAAGATAACATGGTG
GCGGCTGCTGTGATTGACATGCAGAAGGATAAGGGGGGGAATGGTGGGGT
GGACAAAGGCAACTACCCTCATTTGTCTCGCTGGCTGCGGCATGTAGGTG
CTGTGCCGGTGAGTGAGCGGGTGGCGTGGTAGAGGCCGAGGGACGGGGGA
AGGGAGGAAGGGAAGGAGGGAGGAAGGGAAGGAGAGAGGGAGGAGAGGAG
GGAGGAGGGGTCTTTTTCTTGAGGTATTTATTACAGCAGTTTGAAAGATA
AAAAAAGAGAAGCACACGATTTTGTATTGGAAACTCAGAATCATCAAGCA
GGAAGAAAAGAACACGCAAAATAAAGAGGAAAGCAAGAGAAAGCAACGAC
AAGGAGAGAAC

protein sequence of NO15G01780.1

>NO15G01780.1-protein ID=NO15G01780.1-protein|Name=NO15G01780.1|organism=Nannochloropsis oceanica|type=polypeptide|length=764bp
MPIDINLLRADRGGDPDLVRESQRRRFASVELVDQVLAKDAEWRKLINDS
EATRKARNAVQAEVSKKMKAKQECKDLVVQIQDYDKKVLEMDKAVKVAKD
ELDRLLPKIGNIVDDTVPVSQDEEADTEVVRTWGTPVTGDDLLHHHDLLW
RIGGFEPERGSAVAGHRGYFLRDAGLLLNMALINYGVSFLRAREYSVLQP
PYFMNKDVMAGVAQLEQFDEELYKVSGDDDKYLIATSEQPLCGFHKGEWL
EEKSLPLRYGGVSTCFRKEAGAHGKDCWGIFRVHQFDKVEQFVVCEGDLE
VSQKIQEEMILAAEDFYQSLGIAYRVVNIVSGELNNAAIKKFDLEGWFPG
YDTYRELVSCSNCTDYQSRSMEIRCGAKKVGQEGKKYVHMLNSTLCACTR
TICAILENFQTPEGVRVPEVLVPFMGGLTFLPFVREARKDGATAKAADKK
TKKVAVPAKGTAAAVAAAAAGKGQPAAGGVLSEAEKLGEAIAAKGEEIRQ
LKTKKADKATIQSAVNELLALKSEYKKVTGGEYAPPGTVHAEKPAATAAK
APSTSTPSSLPPSNGFTNEAAEIAEAIAAKGEEIRKLKAAKRDKQALAPH
IADLLSLKEKFKSITGKDFAAPNSAAAGEVGETNSKAASQQAARAKQASA
SVQKKAAAEAPAAPSAQGGNGGSEVAVAVESIKGPLFDRSGKPDLVNLNA
YLQTRSYIQGFVPSQEDNMVAAAVIDMQKDKGGNGGVDKGNYPHLSRWLR
HVGAVPVSERVAW*

Synonyms

Publications