NO15G01710, NO15G01710 (gene) Nannochloropsis oceanica

Overview
NameNO15G01710
Unique NameNO15G01710
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2481
Alignment locationchr15:485978..488458 +

Link to JBrowse

Properties
Property NameValue
DescriptionLipase containing protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:485978..488458 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR002921Fungal_lipase-like
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Homology
[Close]
BLAST of NO15G01710 vs. NCBI_GenBank
Match: EWM22433.1 (lipase containing protein [Nannochloropsis gaditana])

HSP 1 Score: 489.6 bits (1259), Expect = 1.900e-134
Identity = 289/588 (49.15%), Postives = 355/588 (60.37%), Query Frame = 0 
Query:    5 RRQQLSSLLWRTGLGGVTCYTM---QRGIRSGTTTYCESP----AGPATGPGKRG------------------YTKSTASKFPK---DTPPDKLSLDKALVDMKEANKALGGSLKGDEVLAIMALLAREVVQQQTKKGTHSP-ARHPSSTLVSPPLSALKSRLYVKRFLEYATLCLNVYDLPSDKDWLFPPPELGPVNRWELLSSHTGGVCIPRHVVLRADGGVGTTRRRRTKRLMVVVRGTAEVTDAAINIAMAPGMWRYNGGEHYCHQGIVESTTFLVRMVRPVIWRAIDKMKREEGIDPGNQVEVVFMGHSLGGAIAAVAALELQGEFGVRVPVKSVGFSTPATLSEEVASAPLTRKIITTVVLGDDMIPRCSTRNLQELKRRARRVLVDEEVGIIREIVAGEVTRRGDEWSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEGWENLWPLLSVMEGGEVLDVRGLKQAFSGVLAHCLPPLIDQXXXXXXXWKTDAAGVAAVRDKEGVAAPLVMAAERKK------------MAEETTAVLEQAIADYQATLDAEIVYVKDYIERIKFGALDSYLPSSLDP 552
            R   LSS++WR+GLGGVTCYT      G  +G  ++C S     A  A+     G                  +TK   SK      D PPDKLSL+K L DMKEA++A+GG+L+G+E LA+MALLARE V +QT     S   +H SS+L  PPLS  + R   K+FLEYA LC N YD    KDWL PP     V+RW+LLS H GGVCIPRHVVLR DGG GT  RRR  R++VVVRGTAEVTDAAINIAM PG W + G E+ CHQGIVES  FL RM RPV+WRA++ + R+EG DPG++VEVV  GHSLGGA AAVAAL+LQGEFG RVPVKSVGFSTPA+L+ ++ASAP TR+++TT+V G D+IPRCSTRNLQELKRRA+ VLV+EEV  I+++V  E+ RRGD W R+                               P  W ++ P +   EG E   V GLK AF G+LA  LP L  +        +    G       EG  +  V A ER +            ++ E    LE+ + +YQA LDAEI + KD +ERIK      YLPSSL P
Sbjct:   83 RLNVLSSIVWRSGLGGVTCYTATIPHYGATNGAFSFCASSTNNMADGASSQASGGDSEAESREKSRSSVSHPAFTKVKGSKTTPSSIDIPPDKLSLEKVLADMKEASRAMGGTLRGEEALALMALLARETVHRQTNAHRDSTRPQHLSSSLTFPPLSGARRRRRAKQFLEYAVLCENAYDFSEGKDWLEPPAGFESVSRWDLLSFHKGGVCIPRHVVLRVDGGEGTRHRRRKTRVLVVVRGTAEVTDAAINIAMVPGGWTHRGKEYQCHQGIVESAEFLARMARPVVWRALEGL-RQEGGDPGSEVEVVLTGHSLGGATAAVAALKLQGEFGPRVPVKSVGFSTPASLAIDLASAPATRRVVTTLVQGADVIPRCSTRNLQELKRRAQNVLVEEEVESIKQMVREELGRRGDAWGRE---------------LTGLLLSTAEGATQQLPGAWRDMLPPILKAEGRETQGVGGLKAAFGGILARYLPALAPEGGGGEDKEEGADGG-------EGNRSRGVNATERSRDDGHTALEGGATLSTEARRRLEEVLGEYQAVLDAEIAFAKDQLERIKRQTFQYYLPSSLAP 647
[Close]
BLAST of NO15G01710 vs. NCBI_GenBank
Match: EWM22505.1 (hypothetical protein Naga_100011g87 [Nannochloropsis gaditana])

HSP 1 Score: 95.5 bits (236), Expect = 8.200e-16
Identity = 74/198 (37.37%), Postives = 104/198 (52.53%), Query Frame = 0 
Query:  628 MLQALIAEKAHMAASAVKSQVEARVRELLSS-SSNKVDKVKNRASKWMTDSFKGLQEQAKAALPVVGERKKGGKEVEEKKRVSVSAVE-EMDGNMTDSATKAAAATEGDLDAVALYPPGEIFYIHPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELRRVRDVTFFDGIVLSPHMFTDHLLTNAIKSLKEVGKE 824
            MLQAL+ EK  +AASAVK + E R R+LLS+  +  V +      + + DS +GL+ Q +AALP   E + G + V+E +  ++SA   E  G++ D    A A T  + ++ ALYPPGEIF+I P                                 ELRRVRDV FFDGIVLS  MF+ HLL++   S   + ++
Sbjct:    1 MLQALVLEKTRLAASAVKEEAEERARDLLSTVGAEGVREKAMETFQAVADSVRGLRAQTEAALPGNNEERAGREAVQEPEPSALSASSPETRGSLAD----APAVTSEEGESEALYPPGEIFHIQP---------CQSPGPAAREGSKEAGRQGAACGYELRRVRDVRFFDGIVLSSDMFSAHLLSSTRNSRARLSEQ 185
[Close]
BLAST of NO15G01710 vs. NCBI_GenBank
Match: ETI53882.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569] >ETM53419.1 hypothetical protein, variant 2 [Phytophthora parasitica])

HSP 1 Score: 84.0 bits (206), Expect = 2.500e-12
Identity = 71/244 (29.10%), Postives = 122/244 (50.00%), Query Frame = 0 
Query:  136 SRLYVKRFLEYATLCLNVYDLPSDKDWLFPPPELGPVNRWELLSSHTGGVCIPRHVVLRADGGVGTTRRRRTKRLMVVVRGTAEVTDAAINIAMAPGMWRYNGGEHYCHQGIVESTTFLVRMVRPVIWRAIDKMKREEGIDPGNQVEVVFMGHSLGGAIAAVAALELQGEFGVRVPVKSVGFSTPATLSEEVASAPLTRKIITTVVLGDDMIPRCSTRNLQELK--------RRARRVLVDEEV 372
            S++ + + L Y  +C  VY        +    +   V R  +L +H GGV  PR ++L AD           + L++VVRGTA + D   ++ +    +    G    H+G+V +TT+LVR +R  + +  ++             ++V  GHSLG A+AA++A++L+ +F     ++   F TPA L+ E+A+   +  ++TTVV G D +PR    +L +L+        R A R +V EE+
Sbjct:    5 SQVLLSKLLRYVRVCDAVY-----ASSIASFCKEASVPRDRVLRAHPGGVVSPRCIIL-AD--------HEHQELVLVVRGTASLLDFCTDLCLQNEPFLDGQG----HRGMVHATTWLVRHLRGDLQKLSERYP---------DYKLVATGHSLGAAVAAMSAMQLKEDF---PDIQCYAFGTPACLTRELATG--SYDLVTTVVNGYDCVPRLHQHSLLKLQDEISRFDWRTALRHMVSEEI 216
[Close]
BLAST of NO15G01710 vs. NCBI_GenBank
Match: XP_008900431.1 (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETI53883.1 hypothetical protein, variant 3 [Phytophthora parasitica P1569] >ETK93735.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL47138.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM00226.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM53420.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN14162.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310])

HSP 1 Score: 84.0 bits (206), Expect = 2.500e-12
Identity = 71/244 (29.10%), Postives = 122/244 (50.00%), Query Frame = 0 
Query:  136 SRLYVKRFLEYATLCLNVYDLPSDKDWLFPPPELGPVNRWELLSSHTGGVCIPRHVVLRADGGVGTTRRRRTKRLMVVVRGTAEVTDAAINIAMAPGMWRYNGGEHYCHQGIVESTTFLVRMVRPVIWRAIDKMKREEGIDPGNQVEVVFMGHSLGGAIAAVAALELQGEFGVRVPVKSVGFSTPATLSEEVASAPLTRKIITTVVLGDDMIPRCSTRNLQELK--------RRARRVLVDEEV 372
            S++ + + L Y  +C  VY        +    +   V R  +L +H GGV  PR ++L AD           + L++VVRGTA + D   ++ +    +    G    H+G+V +TT+LVR +R  + +  ++             ++V  GHSLG A+AA++A++L+ +F     ++   F TPA L+ E+A+   +  ++TTVV G D +PR    +L +L+        R A R +V EE+
Sbjct:    5 SQVLLSKLLRYVRVCDAVY-----ASSIASFCKEASVPRDRVLRAHPGGVVSPRCIIL-AD--------HEHQELVLVVRGTASLLDFCTDLCLQNEPFLDGQG----HRGMVHATTWLVRHLRGDLQKLSERYP---------DYKLVATGHSLGAAVAAMSAMQLKEDF---PDIQCYAFGTPACLTRELATG--SYDLVTTVVNGYDCVPRLHQHSLLKLQDEISRFDWRTALRHMVSEEI 216
[Close]
BLAST of NO15G01710 vs. NCBI_GenBank
Match: ETI53884.1 (hypothetical protein, variant 4 [Phytophthora parasitica P1569] >ETM53421.1 hypothetical protein, variant 4 [Phytophthora parasitica])

HSP 1 Score: 84.0 bits (206), Expect = 2.500e-12
Identity = 71/244 (29.10%), Postives = 122/244 (50.00%), Query Frame = 0 
Query:  136 SRLYVKRFLEYATLCLNVYDLPSDKDWLFPPPELGPVNRWELLSSHTGGVCIPRHVVLRADGGVGTTRRRRTKRLMVVVRGTAEVTDAAINIAMAPGMWRYNGGEHYCHQGIVESTTFLVRMVRPVIWRAIDKMKREEGIDPGNQVEVVFMGHSLGGAIAAVAALELQGEFGVRVPVKSVGFSTPATLSEEVASAPLTRKIITTVVLGDDMIPRCSTRNLQELK--------RRARRVLVDEEV 372
            S++ + + L Y  +C  VY        +    +   V R  +L +H GGV  PR ++L AD           + L++VVRGTA + D   ++ +    +    G    H+G+V +TT+LVR +R  + +  ++             ++V  GHSLG A+AA++A++L+ +F     ++   F TPA L+ E+A+   +  ++TTVV G D +PR    +L +L+        R A R +V EE+
Sbjct:    5 SQVLLSKLLRYVRVCDAVY-----ASSIASFCKEASVPRDRVLRAHPGGVVSPRCIIL-AD--------HEHQELVLVVRGTASLLDFCTDLCLQNEPFLDGQG----HRGMVHATTWLVRHLRGDLQKLSERYP---------DYKLVATGHSLGAAVAAMSAMQLKEDF---PDIQCYAFGTPACLTRELATG--SYDLVTTVVNGYDCVPRLHQHSLLKLQDEISRFDWRTALRHMVSEEI 216
[Close]
BLAST of NO15G01710 vs. NCBI_GenBank
Match: XP_008900430.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETK93734.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL47137.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM00225.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETN14161.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310])

HSP 1 Score: 84.0 bits (206), Expect = 2.500e-12
Identity = 71/244 (29.10%), Postives = 122/244 (50.00%), Query Frame = 0 
Query:  136 SRLYVKRFLEYATLCLNVYDLPSDKDWLFPPPELGPVNRWELLSSHTGGVCIPRHVVLRADGGVGTTRRRRTKRLMVVVRGTAEVTDAAINIAMAPGMWRYNGGEHYCHQGIVESTTFLVRMVRPVIWRAIDKMKREEGIDPGNQVEVVFMGHSLGGAIAAVAALELQGEFGVRVPVKSVGFSTPATLSEEVASAPLTRKIITTVVLGDDMIPRCSTRNLQELK--------RRARRVLVDEEV 372
            S++ + + L Y  +C  VY        +    +   V R  +L +H GGV  PR ++L AD           + L++VVRGTA + D   ++ +    +    G    H+G+V +TT+LVR +R  + +  ++             ++V  GHSLG A+AA++A++L+ +F     ++   F TPA L+ E+A+   +  ++TTVV G D +PR    +L +L+        R A R +V EE+
Sbjct:    5 SQVLLSKLLRYVRVCDAVY-----ASSIASFCKEASVPRDRVLRAHPGGVVSPRCIIL-AD--------HEHQELVLVVRGTASLLDFCTDLCLQNEPFLDGQG----HRGMVHATTWLVRHLRGDLQKLSERYP---------DYKLVATGHSLGAAVAAMSAMQLKEDF---PDIQCYAFGTPACLTRELATG--SYDLVTTVVNGYDCVPRLHQHSLLKLQDEISRFDWRTALRHMVSEEI 216
[Close]
BLAST of NO15G01710 vs. NCBI_GenBank
Match: XP_008900432.1 (hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >ETK93736.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETL47139.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETM00227.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETN14163.1 hypothetical protein, variant 4 [Phytophthora parasitica INRA-310])

HSP 1 Score: 84.0 bits (206), Expect = 2.500e-12
Identity = 71/244 (29.10%), Postives = 122/244 (50.00%), Query Frame = 0 
Query:  136 SRLYVKRFLEYATLCLNVYDLPSDKDWLFPPPELGPVNRWELLSSHTGGVCIPRHVVLRADGGVGTTRRRRTKRLMVVVRGTAEVTDAAINIAMAPGMWRYNGGEHYCHQGIVESTTFLVRMVRPVIWRAIDKMKREEGIDPGNQVEVVFMGHSLGGAIAAVAALELQGEFGVRVPVKSVGFSTPATLSEEVASAPLTRKIITTVVLGDDMIPRCSTRNLQELK--------RRARRVLVDEEV 372
            S++ + + L Y  +C  VY        +    +   V R  +L +H GGV  PR ++L AD           + L++VVRGTA + D   ++ +    +    G    H+G+V +TT+LVR +R  + +  ++             ++V  GHSLG A+AA++A++L+ +F     ++   F TPA L+ E+A+   +  ++TTVV G D +PR    +L +L+        R A R +V EE+
Sbjct:    5 SQVLLSKLLRYVRVCDAVY-----ASSIASFCKEASVPRDRVLRAHPGGVVSPRCIIL-AD--------HEHQELVLVVRGTASLLDFCTDLCLQNEPFLDGQG----HRGMVHATTWLVRHLRGDLQKLSERYP---------DYKLVATGHSLGAAVAAMSAMQLKEDF---PDIQCYAFGTPACLTRELATG--SYDLVTTVVNGYDCVPRLHQHSLLKLQDEISRFDWRTALRHMVSEEI 216
[Close]
BLAST of NO15G01710 vs. NCBI_GenBank
Match: ETP23704.1 (hypothetical protein, variant [Phytophthora parasitica CJ01A1] >ETP51670.1 hypothetical protein, variant [Phytophthora parasitica P10297])

HSP 1 Score: 84.0 bits (206), Expect = 2.500e-12
Identity = 71/244 (29.10%), Postives = 122/244 (50.00%), Query Frame = 0 
Query:  136 SRLYVKRFLEYATLCLNVYDLPSDKDWLFPPPELGPVNRWELLSSHTGGVCIPRHVVLRADGGVGTTRRRRTKRLMVVVRGTAEVTDAAINIAMAPGMWRYNGGEHYCHQGIVESTTFLVRMVRPVIWRAIDKMKREEGIDPGNQVEVVFMGHSLGGAIAAVAALELQGEFGVRVPVKSVGFSTPATLSEEVASAPLTRKIITTVVLGDDMIPRCSTRNLQELK--------RRARRVLVDEEV 372
            S++ + + L Y  +C  VY        +    +   V R  +L +H GGV  PR ++L AD           + L++VVRGTA + D   ++ +    +    G    H+G+V +TT+LVR +R  + +  ++             ++V  GHSLG A+AA++A++L+ +F     ++   F TPA L+ E+A+   +  ++TTVV G D +PR    +L +L+        R A R +V EE+
Sbjct:    5 SQVLLSKLLRYVRVCDAVY-----ASSIASFCKEASVPRDRVLRAHPGGVVSPRCIIL-AD--------HEHQELVLVVRGTASLLDFCTDLCLQNEPFLDGQG----HRGMVHATTWLVRHLRGDLQKLSERYP---------DYKLVATGHSLGAAVAAMSAMQLKEDF---PDIQCYAFGTPACLTRELATG--SYDLVTTVVNGYDCVPRLHQHSLLKLQDEISRFDWRTALRHMVSEEI 216
[Close]
BLAST of NO15G01710 vs. NCBI_GenBank
Match: XP_008900428.1 (hypothetical protein PPTG_07815 [Phytophthora parasitica INRA-310] >ETI53880.1 hypothetical protein F443_03229 [Phytophthora parasitica P1569] >ETK93732.1 hypothetical protein L915_03110 [Phytophthora parasitica] >ETL47135.1 hypothetical protein L916_03081 [Phytophthora parasitica] >ETM53417.1 hypothetical protein L914_03084 [Phytophthora parasitica] >ETN14159.1 hypothetical protein PPTG_07815 [Phytophthora parasitica INRA-310])

HSP 1 Score: 82.8 bits (203), Expect = 5.500e-12
Identity = 77/271 (28.41%), Postives = 130/271 (47.97%), Query Frame = 0 
Query:  109 QQTKKGTHSPARHPSSTLVSPPLSALKSRLYVKRFLEYATLCLNVYDLPSDKDWLFPPPELGPVNRWELLSSHTGGVCIPRHVVLRADGGVGTTRRRRTKRLMVVVRGTAEVTDAAINIAMAPGMWRYNGGEHYCHQGIVESTTFLVRMVRPVIWRAIDKMKREEGIDPGNQVEVVFMGHSLGGAIAAVAALELQGEFGVRVPVKSVGFSTPATLSEEVASAPLTRKIITTVVLGDDMIPRCSTRNLQELK--------RRARRVLVDEEV 372
            QQ   G H+ A          PL  +  ++ + + L Y  +C  VY        +    +   V R  +L +H GGV  PR ++L AD           + L++VVRGTA + D   ++ +    +    G    H+G+V +TT+LVR +R  + +  ++             ++V  GHSLG A+AA++A++L+ +F     ++   F TPA L+ E+A+   +  ++TTVV G D +PR    +L +L+        R A R +V EE+
Sbjct:   87 QQRAGGIHNDAH-------KKPL--VMDKVLLSKLLRYVRVCDAVY-----ASSIASFCKEASVPRDRVLRAHPGGVVSPRCIIL-AD--------HEHQELVLVVRGTASLLDFCTDLCLQNEPFLDGQG----HRGMVHATTWLVRHLRGDLQKLSERYP---------DYKLVATGHSLGAAVAAMSAMQLKEDF---PDIQCYAFGTPACLTRELATG--SYDLVTTVVNGYDCVPRLHQHSLLKLQDEISRFDWRTALRHMVSEEI 316
[Close]
BLAST of NO15G01710 vs. NCBI_GenBank
Match: XP_008900429.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI53881.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK93733.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL47136.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM53418.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN14160.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310])

HSP 1 Score: 82.8 bits (203), Expect = 5.500e-12
Identity = 77/271 (28.41%), Postives = 130/271 (47.97%), Query Frame = 0 
Query:  109 QQTKKGTHSPARHPSSTLVSPPLSALKSRLYVKRFLEYATLCLNVYDLPSDKDWLFPPPELGPVNRWELLSSHTGGVCIPRHVVLRADGGVGTTRRRRTKRLMVVVRGTAEVTDAAINIAMAPGMWRYNGGEHYCHQGIVESTTFLVRMVRPVIWRAIDKMKREEGIDPGNQVEVVFMGHSLGGAIAAVAALELQGEFGVRVPVKSVGFSTPATLSEEVASAPLTRKIITTVVLGDDMIPRCSTRNLQELK--------RRARRVLVDEEV 372
            QQ   G H+ A          PL  +  ++ + + L Y  +C  VY        +    +   V R  +L +H GGV  PR ++L AD           + L++VVRGTA + D   ++ +    +    G    H+G+V +TT+LVR +R  + +  ++             ++V  GHSLG A+AA++A++L+ +F     ++   F TPA L+ E+A+   +  ++TTVV G D +PR    +L +L+        R A R +V EE+
Sbjct:   87 QQRAGGIHNDAH-------KKPL--VMDKVLLSKLLRYVRVCDAVY-----ASSIASFCKEASVPRDRVLRAHPGGVVSPRCIIL-AD--------HEHQELVLVVRGTASLLDFCTDLCLQNEPFLDGQG----HRGMVHATTWLVRHLRGDLQKLSERYP---------DYKLVATGHSLGAAVAAMSAMQLKEDF---PDIQCYAFGTPACLTRELATG--SYDLVTTVVNGYDCVPRLHQHSLLKLQDEISRFDWRTALRHMVSEEI 316
The following BLAST results are available for this feature:
BLAST of NO15G01710 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22433.11.900e-13449.15lipase containing protein [Nannochloropsis gaditan... [more]
EWM22505.18.200e-1637.37hypothetical protein Naga_100011g87 [Nannochlorops... [more]
ETI53882.12.500e-1229.10hypothetical protein, variant 2 [Phytophthora para... [more]
XP_008900431.12.500e-1229.10hypothetical protein, variant 3 [Phytophthora para... [more]
ETI53884.12.500e-1229.10hypothetical protein, variant 4 [Phytophthora para... [more]
XP_008900430.12.500e-1229.10hypothetical protein, variant 2 [Phytophthora para... [more]
XP_008900432.12.500e-1229.10hypothetical protein, variant 4 [Phytophthora para... [more]
ETP23704.12.500e-1229.10hypothetical protein, variant [Phytophthora parasi... [more]
XP_008900428.15.500e-1228.41hypothetical protein PPTG_07815 [Phytophthora para... [more]
XP_008900429.15.500e-1228.41hypothetical protein, variant 1 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL144nonsL144Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL142nonsL142Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR066ngnoR066Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001438NSK001438Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01710.1NO15G01710.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587647gene_4719Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100011g87gene8015Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01710.1NO15G01710.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01710 ID=NO15G01710|Name=NO15G01710|organism=Nannochloropsis oceanica|type=gene|length=2481bp
ATGTACAGTCTGCGCCGCCAACAGCTCTCTTCTCTCCTCTGGCGCACGGG
TCTGGGAGGCGTTACTTGCTACACCATGCAACGTGGCATCAGGTCGGGCA
CGACCACGTACTGCGAGTCGCCGGCTGGCCCAGCCACCGGACCAGGCAAA
CGTGGATACACGAAGAGTACTGCCTCCAAGTTCCCCAAAGACACACCGCC
GGACAAACTCTCCCTTGACAAGGCATTGGTCGACATGAAAGAAGCCAACA
AGGCCTTAGGCGGCAGCCTAAAAGGAGACGAAGTCCTGGCTATCATGGCA
TTGCTCGCTCGGGAAGTCGTCCAACAGCAGACAAAAAAAGGCACCCACTC
CCCGGCCCGCCACCCCTCATCCACGCTTGTCTCTCCTCCGCTATCCGCCT
TAAAAAGTCGCCTGTATGTCAAACGCTTTTTAGAGTATGCAACTTTGTGC
CTTAATGTCTATGATCTTCCTTCGGATAAAGATTGGCTCTTTCCTCCTCC
AGAGCTCGGCCCTGTCAACCGGTGGGAGCTCCTCTCTTCGCACACAGGCG
GTGTCTGCATCCCTCGCCACGTCGTCCTAAGGGCAGATGGAGGAGTGGGT
ACGACAAGAAGGAGGAGGACGAAACGACTTATGGTTGTAGTGAGGGGGAC
GGCAGAAGTGACGGACGCGGCGATAAATATTGCCATGGCTCCTGGCATGT
GGCGATACAATGGGGGGGAGCATTATTGTCATCAGGGAATCGTTGAATCT
ACAACTTTTCTGGTACGAATGGTCAGGCCGGTTATATGGCGGGCGATCGA
CAAAATGAAGAGGGAGGAGGGGATAGATCCAGGAAATCAGGTTGAGGTAG
TGTTTATGGGCCATAGTCTTGGAGGAGCGATTGCTGCAGTTGCGGCGTTG
GAGCTGCAAGGGGAGTTTGGGGTGCGAGTGCCGGTTAAAAGTGTGGGGTT
TAGCACTCCTGCAACTTTGTCGGAAGAGGTGGCATCGGCACCATTGACCC
GGAAAATAATCACGACTGTTGTGCTCGGGGATGACATGATTCCGAGATGC
TCGACGAGGAATTTGCAGGAGTTAAAGAGGAGAGCGAGAAGAGTGTTGGT
GGATGAGGAAGTGGGCATCATTCGTGAAATAGTGGCGGGGGAGGTCACGA
GGAGGGGGGATGAATGGAGTCGGCAGATACATGGGGAGGTGACGAGGAGA
GGGGAGAAATGGACCAAGCAGTTGACGGCCATGCTCTCAAGCAAGGCGAA
CGAGGCCAAGCGACAGCTTCCTGAAGGGTGGGAAAACTTATGGCCTCTTT
TATCGGTGATGGAGGGGGGGGAAGTATTGGATGTAAGAGGGCTAAAGCAA
GCGTTTAGTGGCGTCTTGGCGCATTGCCTCCCACCGTTGATAGATCAGCA
GCAGCAAAAACAGCAACAGTGGAAGACGGATGCAGCGGGAGTTGCAGCGG
TAAGAGATAAGGAGGGAGTGGCGGCGCCACTGGTTATGGCAGCTGAGAGG
AAGAAGATGGCGGAGGAGACAACTGCAGTGTTGGAGCAGGCGATAGCTGA
TTACCAGGCAACACTCGATGCAGAGATTGTGTACGTCAAAGATTATATTG
AACGCATCAAATTCGGCGCCCTTGATTCCTACCTACCCTCCTCTCTTGAT
CCTACTCTGTCTCCTTCATCGATCTTAAAAGCAAAGCAGAGACGCACTGG
CAGCAGCAGCAGCAGTAGTAGTAGTAGCAGCAGCAGCAGCGTTTCAAACG
TCGAAAACGACGCATTCGACCAGGAGTACGACGCTGAAGAAGAGGCAAAC
GAGCAGGCCCTTTTTGATGCCAATATCACCCGGGCCGCCGAAAGGAATGA
AAAACCCATGGATATCACTGCGGTGCAAGCCATGCTCCAAGCATTAATTG
CCGAGAAAGCCCACATGGCAGCCTCCGCAGTCAAGAGCCAAGTGGAAGCC
CGGGTGAGAGAGTTGTTGAGTTCTTCTTCCAATAAGGTCGACAAAGTGAA
GAACAGGGCGTCGAAATGGATGACGGACTCCTTCAAAGGCTTGCAGGAGC
AGGCAAAAGCAGCCTTACCCGTCGTGGGGGAAAGGAAGAAGGGAGGGAAG
GAGGTTGAAGAGAAAAAGAGGGTGTCAGTTTCGGCGGTGGAAGAAATGGA
CGGAAACATGACGGACTCTGCAACAAAAGCAGCAGCTGCCACAGAAGGGG
ATTTGGACGCAGTAGCTTTGTACCCACCCGGAGAAATTTTTTATATTCAC
CCTTTGCCACTCCCCGATTCCTCCAGCAACAGCAGTGGTAGTGGCAGCAG
CAGCAACGGCAGTCGCGGCGGGCGTCGAAGAGGGAAAGCAAAGTATAATT
ATGAATTGAGACGGGTGAGGGATGTGACGTTCTTTGATGGGATTGTTCTC
TCTCCTCATATGTTTACTGATCATTTGTTGACCAACGCGATCAAGAGCTT
GAAAGAGGTGGGTAAGGAGGGAGACGGTTAA
back to top

protein sequence of NO15G01710.1

>NO15G01710.1-protein ID=NO15G01710.1-protein|Name=NO15G01710.1|organism=Nannochloropsis oceanica|type=polypeptide|length=827bp
MYSLRRQQLSSLLWRTGLGGVTCYTMQRGIRSGTTTYCESPAGPATGPGK
RGYTKSTASKFPKDTPPDKLSLDKALVDMKEANKALGGSLKGDEVLAIMA
LLAREVVQQQTKKGTHSPARHPSSTLVSPPLSALKSRLYVKRFLEYATLC
LNVYDLPSDKDWLFPPPELGPVNRWELLSSHTGGVCIPRHVVLRADGGVG
TTRRRRTKRLMVVVRGTAEVTDAAINIAMAPGMWRYNGGEHYCHQGIVES
TTFLVRMVRPVIWRAIDKMKREEGIDPGNQVEVVFMGHSLGGAIAAVAAL
ELQGEFGVRVPVKSVGFSTPATLSEEVASAPLTRKIITTVVLGDDMIPRC
STRNLQELKRRARRVLVDEEVGIIREIVAGEVTRRGDEWSRQIHGEVTRR
GEKWTKQLTAMLSSKANEAKRQLPEGWENLWPLLSVMEGGEVLDVRGLKQ
AFSGVLAHCLPPLIDQQQQKQQQWKTDAAGVAAVRDKEGVAAPLVMAAER
KKMAEETTAVLEQAIADYQATLDAEIVYVKDYIERIKFGALDSYLPSSLD
PTLSPSSILKAKQRRTGSSSSSSSSSSSSSVSNVENDAFDQEYDAEEEAN
EQALFDANITRAAERNEKPMDITAVQAMLQALIAEKAHMAASAVKSQVEA
RVRELLSSSSNKVDKVKNRASKWMTDSFKGLQEQAKAALPVVGERKKGGK
EVEEKKRVSVSAVEEMDGNMTDSATKAAAATEGDLDAVALYPPGEIFYIH
PLPLPDSSSNSSGSGSSSNGSRGGRRRGKAKYNYELRRVRDVTFFDGIVL
SPHMFTDHLLTNAIKSLKEVGKEGDG*
back to top
Synonyms
Publications