NO15G01630, NO15G01630 (gene) Nannochloropsis oceanica

Overview
NameNO15G01630
Unique NameNO15G01630
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3212
Alignment locationchr15:457669..460880 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:457669..460880 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
[Close]
BLAST of NO15G01630 vs. NCBI_GenBank
Match: EWM22459.1 (hypothetical protein Naga_100011g83 [Nannochloropsis gaditana])

HSP 1 Score: 533.1 bits (1372), Expect = 2.000e-147
Identity = 381/969 (39.32%), Postives = 509/969 (52.53%), Query Frame = 0 
Query:   72 MLFKHQLPRPLHAKDTPLLEAEAAPSTAGSPTSVLIAAKAGRRRLHIFKWKCFLGVVEAPAEVTCCKLVSMTGEGHQCMSLVVGCRSGSVYRVEDVEARISAA-ANGDGRCSTGMLCLGSEHLCFSFPDDTSQIDKL---MVGSREGAKESSDQTVVAVVRRDADTVVHLVWK----DKDTPPADYSKVELDSPGHPLACLPAPTDGNTILLHVRHDRNQGPPTPSGGFQLYFTPL--VHDTTIKDPQKRQA-VLLHVFHKQVVAVLPVPIGGNKGATLVAVERDGLLSLLPDPRAMKTSQS-KVEQVRMAQLSLSPATGGLQAAVLVGNSDIIACLSTRGSVWFSRLSILFPGIFFDSSNHYSALAPPSSSLSSSNINCMRVDCGPEVIALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRRGRILCFQSFPSIPHPYISRVSFLMSGAATAAASSTTPHPLIAGAVNIDADASIDETETLLNQIERACHQTKASHQQIAHTEDAIEKVRTAWTVLAGKGLLETFLDVIHPSSSSPSPSSFLKVRLHNPAENETLPLQGWSLIVRIEAASASAAQGPSALLLPVISQPAAAVLSGASWGLDDIGPGEDFEAHMVLPVTGSLLPHTVRVTLCCPFAGAGDGRSDARASSPRVQQQKEVGVCLELGSRPLDVLDLARPPKTVPFTPAGMRTMEATAAKRGRNQNWEGSLAQLLFEKVTCNDNEDGYGGERRGRKEECGKRAAGGILKGGDATIPMALPRPLISSTLRILWPAAPMEMEKGETMDGDAMSPVC-LPALVDLLGPCDGAKIIEEGGGRALALQAPGSKLLLARLLAGKARIRMDDEENSEATGLQLSLTGTDQGLVSLLRAACCQRLGVGGSVRARRLPLTGTRMKTLETAHHQATALAAELQEAIERDVVEVVEEEGTLGQAQEKCLQKRLALARRVVKLAVVLAKEVDEAFLLDLRPD 1028
            MLFKHQLP P+ +  + +L+       A SPTSV IA  +G  RL++++W  FLGVVEAP  +T C+LV M G     +SL +GC+  +V+ VE++EA ++    NG  +   G L LG +      P+   ++       VG+      SS + V AVV  +A   V  V      D   P    S       G P+ C    T     LL V H R Q   + +   QLY  PL     +   D     A  L   F  +V+A++    G  K   ++AVE  G LSLLP        ++ K  +VR   L L      ++AAV+VG  D +ACLS+RG VW + LS  F  +  +      ++A          ++C R++C P V+A+                              T++GR+LCFQ  P  P                 ++      P+       +  AS+ + E +L ++E AC +T+ASH ++A TE+ ++++R AW V AGKG L   +DV H SS +  P+  LKVRL N  E+E   LQGWSL++R+E A+ S +  P   LL  +S P A VL GASW L D+GP EDF+A   LP TGSLLP T R++LC PF  +      AR  +      ++ G+CLELGSRPLD+LDLA P K+VP TP+ +R +E  A K+GR  +WE  LA+ L   V   + E G       ++E       GG+L           PRPL+SSTLRILWP      E  +   GDA      LPAL D+LG CDGA++  +G  R LA+QAP  ++LLARLLAG  R+RMD+ E  EA  LQL L GTDQGL+SLLRA CCQRLG G SVR RRL LT TRMKTLE+ HHQ  ALAAELQ     DV    EE              +  +ARR  +LAVVL++EVDEAFLLDLRPD
Sbjct:    1 MLFKHQLPGPVRSGVSTVLDVLV---PASSPTSVYIAVTSGTSRLYVYRWDRFLGVVEAPNAITSCRLVLMRGAIKPSVSLFIGCQPAAVFIVENLEATLTGIDNNGKKKTPAGFLRLGVDQFRSVLPEKALKVISFEGGAVGTALTEDISSGRDVFAVVETEAAMAVCCVSSSMQGDARLPFIILSGRHNCGRG-PMLC----TSTGAHLLLVIHSRTQQQVSTTAS-QLYSAPLPGARSSLRSDAAPCPAGTLRKGFASKVIALVEFAAGEAKD-VVIAVEETGWLSLLPVSHVEDMPENGKTHRVR---LRLGATDKRVRAAVVVG--DFLACLSSRGVVWLTPLSNCFSKLPDEGPRWEESMA----------VHCARLNCAPNVVAV---------------AASPSSLLRPALFVLTQQGRLLCFQDLPFPP----------------LSSEPPLDAPVRVVEARCEEKASL-QVEAILRRVEDACRRTQASHLELAKTEEDLKRLRAAWAVAAGKGFLVASIDVTHASSPATIPAPSLKVRLQNATEDEAFSLQGWSLMLRVEGAAPSMSPDPVGGLLRALSPPGAGVLVGASWPLPDLGPREDFQAETPLPDTGSLLPLTARLSLCLPFLTSS---PSARGDAGIAGISEQAGLCLELGSRPLDMLDLAHPVKSVPATPSEVRALEVEARKQGRGPSWERCLARHLLADVLGKEGEGGAEIRNLSQREAPRGAEQGGMLGSS--------PRPLLSSTLRILWPVLSTGREHLQNFHGDAAPCAAPLPALADILGACDGARMSMKGQERTLAIQAPEGEVLLARLLAGDMRVRMDESEGVEAMALQLKLYGTDQGLLSLLRATCCQRLGPGASVRTRRLLLTDTRMKTLESVHHQLAALAAELQNGY--DVRNGKEE------TDRNRFGWKFDMARRTARLAVVLSREVDEAFLLDLRPD 893
The following BLAST results are available for this feature:
BLAST of NO15G01630 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22459.12.000e-14739.32hypothetical protein Naga_100011g83 [Nannochlorops... [more]
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001443NSK001443Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01630.1NO15G01630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587598gene_4707Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100011g83gene8011Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01630.1NO15G01630.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01630 ID=NO15G01630|Name=NO15G01630|organism=Nannochloropsis oceanica|type=gene|length=3212bp
ATGGATGGAATCGTGCCTGCCTTTGAGTGTAAGGGACCGGGACATGCACA
GACGCCTGTCCTCGATCGCCAGAGAAGCGGGGTGCCAACGTTCTGCTCCG
TTGCTTCACGTGGACCTCAACTCGACACCACACCCCACCCACCCCATACC
ACACAGCATGGCAAGAAGGATGGGAAAAAGGAGCTCTTGACCAAGCTACA
GGCCGCCGCCCGAATGCTCTTCAAGCATCAGCTCCCGCGGCCACTCCATG
CTAAGGACACGCCCCTTCTCGAGGCAGAGGCCGCCCCGTCGACCGCCGGG
TCTCCAACCTCTGTTTTAATCGCGGCTAAAGCGGGCCGTCGTCGTCTGCA
TATATTCAAATGGAAATGTTTTCTGGGTGTAGTGGAGGCACCGGCGGAAG
TGACGTGTTGCAAGCTGGTGTCTATGACGGGGGAGGGTCACCAGTGCATG
TCCTTGGTCGTGGGCTGTAGGTCGGGCAGCGTCTACCGTGTGGAAGACGT
CGAGGCCCGCATATCTGCTGCTGCCAACGGTGATGGACGTTGTAGCACGG
GGATGCTCTGCCTGGGGTCTGAACACTTGTGCTTTAGCTTCCCAGACGAC
ACCTCACAAATCGACAAGCTAATGGTAGGATCAAGGGAGGGGGCAAAAGA
GTCGTCGGATCAAACTGTCGTTGCCGTGGTGAGGAGAGACGCGGACACCG
TCGTACACCTAGTATGGAAGGACAAGGACACGCCCCCAGCTGACTATTCC
AAAGTAGAGCTGGATTCACCCGGGCATCCACTAGCATGTCTTCCGGCTCC
CACAGACGGCAACACAATCTTACTGCACGTCCGCCACGACCGAAATCAAG
GCCCTCCTACGCCGTCTGGCGGCTTCCAGCTCTACTTCACACCTTTGGTA
CACGATACAACAATAAAGGATCCACAAAAGAGGCAGGCGGTGCTTTTGCA
TGTCTTTCATAAGCAAGTGGTTGCGGTGCTACCTGTGCCCATTGGAGGGA
ACAAGGGCGCGACGCTGGTGGCGGTTGAACGAGATGGTCTCCTATCACTC
CTGCCCGATCCCAGGGCAATGAAAACGTCTCAATCAAAGGTGGAGCAGGT
TCGCATGGCCCAGCTTTCACTCAGTCCGGCAACAGGAGGGCTCCAAGCCG
CTGTCCTTGTTGGTAATAGCGACATTATCGCCTGCCTCTCTACTCGAGGC
AGCGTTTGGTTCTCCCGCCTCTCCATCCTCTTTCCTGGCATATTCTTCGA
CAGTTCCAATCATTACAGCGCACTGGCGCCTCCCTCTTCTTCTCTGTCCT
CCTCCAATATAAACTGTATGCGCGTGGACTGCGGCCCGGAAGTGATTGCC
TTGGCGGCCCCTTCCTCCTCCACCACCTCCTCCTCCACTTCCTCCTCCTT
TCCCTCCTCCTCTCCACAACAGCCCCCGGTTCTCTATCTACTGACCCGTC
GAGGACGAATTTTGTGCTTTCAAAGCTTTCCTTCCATACCTCATCCTTAT
ATTTCACGTGTTTCCTTTCTGATGTCTGGGGCCGCCACCGCCGCCGCCTC
TAGCACCACCCCTCATCCTCTTATCGCTGGTGCCGTAAATATTGATGCTG
ATGCTTCTATAGACGAGACCGAAACCCTCCTCAACCAAATCGAACGAGCC
TGTCATCAGACCAAAGCCTCCCACCAGCAAATCGCTCACACGGAGGACGC
AATTGAGAAGGTCCGCACGGCCTGGACAGTCCTTGCGGGCAAGGGCCTTC
TCGAAACCTTCCTCGACGTAATCCATCCTTCCTCCTCCTCCCCTTCCCCA
TCCTCCTTTCTCAAAGTACGCCTTCACAACCCCGCTGAAAACGAGACCTT
GCCTTTACAGGGGTGGTCGTTGATTGTACGCATCGAAGCAGCATCTGCGT
CGGCCGCCCAGGGACCATCGGCCCTCCTCCTTCCTGTTATCTCTCAGCCG
GCAGCGGCTGTTTTGTCGGGGGCGAGTTGGGGTTTAGATGATATTGGGCC
TGGAGAAGACTTTGAAGCTCACATGGTTTTACCTGTCACTGGTTCACTCT
TGCCGCACACGGTGCGTGTGACGTTGTGTTGTCCCTTTGCTGGTGCTGGT
GATGGTCGTAGTGACGCAAGGGCGTCCTCACCAAGAGTGCAACAGCAAAA
GGAGGTCGGTGTGTGTTTGGAGCTGGGGTCGCGGCCGCTTGACGTGCTGG
ACTTGGCTCGGCCACCCAAGACGGTACCCTTCACACCAGCAGGGATGCGG
ACAATGGAGGCAACAGCAGCGAAACGGGGCCGAAATCAGAACTGGGAAGG
GAGTCTCGCGCAATTATTGTTTGAGAAGGTGACATGTAATGATAACGAGG
ATGGATATGGAGGTGAGCGAAGAGGAAGGAAGGAAGAATGTGGTAAAAGG
GCTGCGGGAGGGATACTTAAAGGAGGAGATGCAACAATACCCATGGCCTT
GCCGAGACCGTTGATCTCCTCAACCCTGCGTATTTTGTGGCCTGCTGCGC
CGATGGAGATGGAAAAGGGGGAAACAATGGATGGGGACGCTATGTCGCCC
GTTTGTTTGCCTGCCTTAGTTGATCTTTTGGGTCCTTGTGACGGGGCCAA
AATAATAGAGGAAGGGGGAGGACGGGCGCTCGCTCTGCAGGCACCGGGGA
GCAAGCTACTGCTAGCCCGCTTGCTGGCGGGAAAGGCGCGGATTCGGATG
GACGACGAAGAGAACAGCGAAGCGACAGGGTTGCAGCTCTCCTTGACGGG
CACTGACCAGGGTCTCGTCAGCTTGTTGCGGGCGGCGTGTTGCCAAAGGC
TGGGAGTGGGAGGTTCGGTGCGCGCGCGACGATTGCCACTGACGGGTACG
CGGATGAAGACTCTAGAGACGGCGCACCATCAGGCGACAGCTTTGGCGGC
CGAGCTTCAGGAGGCAATAGAGCGCGATGTAGTAGAGGTAGTAGAGGAGG
AGGGGACGCTGGGACAGGCACAAGAGAAGTGTCTTCAAAAGAGATTGGCA
CTTGCCCGGCGAGTGGTGAAGCTGGCCGTAGTTCTGGCGAAAGAGGTTGA
TGAGGCTTTCCTCTTGGATCTGCGGCCGGATGGGTTTCAAGAGAGGGGAT
TTGAAAAGGAAGGAGCGGAGGCGGACGGTATGCAGGACGAAGAAGGGTAT
TTTAGAAACTAACCGACATAGCCATTCGTTGAAAAAGATAAAAAATATTC
TGAAATCCTATG
back to top

protein sequence of NO15G01630.1

>NO15G01630.1-protein ID=NO15G01630.1-protein|Name=NO15G01630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1054bp
MDGIVPAFECKGPGHAQTPVLDRQRSGVPTFCSVASRGPQLDTTPHPPHT
TQHGKKDGKKELLTKLQAAARMLFKHQLPRPLHAKDTPLLEAEAAPSTAG
SPTSVLIAAKAGRRRLHIFKWKCFLGVVEAPAEVTCCKLVSMTGEGHQCM
SLVVGCRSGSVYRVEDVEARISAAANGDGRCSTGMLCLGSEHLCFSFPDD
TSQIDKLMVGSREGAKESSDQTVVAVVRRDADTVVHLVWKDKDTPPADYS
KVELDSPGHPLACLPAPTDGNTILLHVRHDRNQGPPTPSGGFQLYFTPLV
HDTTIKDPQKRQAVLLHVFHKQVVAVLPVPIGGNKGATLVAVERDGLLSL
LPDPRAMKTSQSKVEQVRMAQLSLSPATGGLQAAVLVGNSDIIACLSTRG
SVWFSRLSILFPGIFFDSSNHYSALAPPSSSLSSSNINCMRVDCGPEVIA
LAAPSSSTTSSSTSSSFPSSSPQQPPVLYLLTRRGRILCFQSFPSIPHPY
ISRVSFLMSGAATAAASSTTPHPLIAGAVNIDADASIDETETLLNQIERA
CHQTKASHQQIAHTEDAIEKVRTAWTVLAGKGLLETFLDVIHPSSSSPSP
SSFLKVRLHNPAENETLPLQGWSLIVRIEAASASAAQGPSALLLPVISQP
AAAVLSGASWGLDDIGPGEDFEAHMVLPVTGSLLPHTVRVTLCCPFAGAG
DGRSDARASSPRVQQQKEVGVCLELGSRPLDVLDLARPPKTVPFTPAGMR
TMEATAAKRGRNQNWEGSLAQLLFEKVTCNDNEDGYGGERRGRKEECGKR
AAGGILKGGDATIPMALPRPLISSTLRILWPAAPMEMEKGETMDGDAMSP
VCLPALVDLLGPCDGAKIIEEGGGRALALQAPGSKLLLARLLAGKARIRM
DDEENSEATGLQLSLTGTDQGLVSLLRAACCQRLGVGGSVRARRLPLTGT
RMKTLETAHHQATALAAELQEAIERDVVEVVEEEGTLGQAQEKCLQKRLA
LARRVVKLAVVLAKEVDEAFLLDLRPDGFQERGFEKEGAEADGMQDEEGY
FRN*
back to top
Synonyms
Publications