NO15G01560, NO15G01560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01560 vs. NCBI_GenBank
Match: EWM22436.1 (Translation protein SH3 [Nannochloropsis gaditana]) HSP 1 Score: 256.1 bits (653), Expect = 6.400e-65 Identity = 133/145 (91.72%), Postives = 139/145 (95.86%), Query Frame = 0 Query: 1 MKFSPNVSSSRRKSRKAHFTAPSHVRRTIMTAPLSKELQAKYKVRSMPIRKDDEVQVVRGGFKNREGKVTTVYRKKFVIHIDRITREKANGATVHVGIDASKVHITKLKLNKARKEILERKARTGAGSKGKVTEAEVGANMGGVD 146 MK+SPNVSSSRRKSRKAHFTAPSH+RR +MTAPLSKELQAKYKVRSMPIRK DEVQVVRG FKNREGKVT VYRKKFVIHIDRITREKANGATV+VGIDASKVHITKLK+NKARKEILERKARTGA KGKVTEAEVG+NMGGVD Sbjct: 9 MKYSPNVSSSRRKSRKAHFTAPSHIRRKLMTAPLSKELQAKYKVRSMPIRKSDEVQVVRGVFKNREGKVTAVYRKKFVIHIDRITREKANGATVNVGIDASKVHITKLKMNKARKEILERKARTGAAGKGKVTEAEVGSNMGGVD 153
BLAST of NO15G01560 vs. NCBI_GenBank
Match: XP_013899158.1 (60S ribosomal protein L26-1 [Monoraphidium neglectum] >KIZ00139.1 60S ribosomal protein L26-1 [Monoraphidium neglectum]) HSP 1 Score: 187.2 bits (474), Expect = 3.600e-44 Identity = 101/138 (73.19%), Postives = 116/138 (84.06%), Query Frame = 0 Query: 2 KFSPNVSSSRRKSRKAHFTAPSHVRRTIMTAPLSKELQAKYKVRSMPIRKDDEVQVVRGGFKNREGKVTTVYRKKFVIHIDRITREKANGATVHVGIDASKVHITKLKLNKARKEILERKARTGAGSKGKVTEAEVGA 140 KFS VSSSRRKSRKAHF+APS+VRR +M++PL+ EL+ KY V+++PIRKDDEVQVVRG FK REGKVTTVYRKK+VIHI+RITREK NGATV VGID SKV ITKLKL+K R+ +LERKA G KGK TE EV A Sbjct: 3 KFSSAVSSSRRKSRKAHFSAPSNVRRKLMSSPLNAELKQKYNVKAVPIRKDDEVQVVRGTFKGREGKVTTVYRKKWVIHIERITREKVNGATVSVGIDPSKVVITKLKLDKDRRALLERKAAGRGGDKGKFTEQEVQA 140
BLAST of NO15G01560 vs. NCBI_GenBank
Match: GAX97142.1 (ribosomal protein L24, partial [Pythium insidiosum]) HSP 1 Score: 185.7 bits (470), Expect = 1.100e-43 Identity = 103/144 (71.53%), Postives = 118/144 (81.94%), Query Frame = 0 Query: 2 KFSPNVSSSRRKSRKAHFTAPSHVRRTIMTAPLSKELQAKYKVRSMPIRKDDEVQVVRGGFKNREGKVTTVYRKKFVIHIDRITREKANGATVHVGIDASKVHITKLKLNKARKEILERKARTGAGSKGKVTEAEVGANMGGVD 146 KF+ VSSSRRKSRKAHF + S RR +M+APLSKELQ KY VRS+PIRKDDEV +VRG FKNREG+VTTVYRKKFVIH++R+ REKANGATV VGIDASKV ITK+KL+K RK+ILERK R +KGK TEA+V M VD Sbjct: 1 KFNSAVSSSRRKSRKAHFGSHSTARRVLMSAPLSKELQKKYNVRSLPIRKDDEVTIVRGSFKNREGRVTTVYRKKFVIHVERVVREKANGATVPVGIDASKVVITKIKLDKDRKKILERKNR-ATDAKGKFTEADV--QMANVD 141
BLAST of NO15G01560 vs. NCBI_GenBank
Match: PKA62036.1 (60S ribosomal protein L26-2 [Apostasia shenzhenica]) HSP 1 Score: 184.5 bits (467), Expect = 2.400e-43 Identity = 99/141 (70.21%), Postives = 117/141 (82.98%), Query Frame = 0 Query: 1 MKFSPNVSSSRRKSRKAHFTAPSHVRRTIMTAPLSKELQAKYKVRSMPIRKDDEVQVVRGGFKNREGKVTTVYRKKFVIHIDRITREKANGATVHVGIDASKVHITKLKLNKARKEILERKARTGAG--SKGKVTEAEVGA 140 MKF+P VSSSRRK+RKAHFTAPS VRR +M+APLS +L+ KY VRS+P+RKDDEVQVVRG FK REGKV VYRKK+VIHI+RITREK NG+TV+VGID SKV +TKLKL+K RK +L+RKAR A +KGK + EV A Sbjct: 1 MKFNPRVSSSRRKNRKAHFTAPSSVRRKLMSAPLSSDLRGKYNVRSIPVRKDDEVQVVRGTFKGREGKVVQVYRKKWVIHIERITREKVNGSTVNVGIDPSKVVVTKLKLDKDRKSLLDRKARGRAADKAKGKFSAEEVAA 141
BLAST of NO15G01560 vs. NCBI_GenBank
Match: XP_020680842.1 (60S ribosomal protein L26-2-like [Dendrobium catenatum] >PKU64061.1 60S ribosomal protein L26-2 [Dendrobium catenatum]) HSP 1 Score: 184.1 bits (466), Expect = 3.100e-43 Identity = 99/141 (70.21%), Postives = 116/141 (82.27%), Query Frame = 0 Query: 1 MKFSPNVSSSRRKSRKAHFTAPSHVRRTIMTAPLSKELQAKYKVRSMPIRKDDEVQVVRGGFKNREGKVTTVYRKKFVIHIDRITREKANGATVHVGIDASKVHITKLKLNKARKEILERKARTGAG--SKGKVTEAEVGA 140 MKF+P VSSSRRK RKAHFTAPS VRR +M+APLS +L+ KY VRSMP+RKDDEVQVVRG +K REGK+ VYRKK+VIHI+RITREK NG+TV+VGID SKV ITKLKL+K RK +L+RKAR A +KGK + EV A Sbjct: 1 MKFNPRVSSSRRKCRKAHFTAPSSVRRKLMSAPLSSDLRGKYSVRSMPVRKDDEVQVVRGTYKGREGKIVQVYRKKWVIHIERITREKVNGSTVNVGIDPSKVVITKLKLDKDRKSLLDRKARGRAADKAKGKFSAEEVAA 141
BLAST of NO15G01560 vs. NCBI_GenBank
Match: XP_005645950.1 (ribosomal protein L24 [Coccomyxa subellipsoidea C-169] >EIE21406.1 ribosomal protein L24 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 183.3 bits (464), Expect = 5.300e-43 Identity = 96/139 (69.06%), Postives = 116/139 (83.45%), Query Frame = 0 Query: 1 MKFSPNVSSSRRKSRKAHFTAPSHVRRTIMTAPLSKELQAKYKVRSMPIRKDDEVQVVRGGFKNREGKVTTVYRKKFVIHIDRITREKANGATVHVGIDASKVHITKLKLNKARKEILERKARTGAGSKGKVTEAEVGA 140 MKFS VSSSRRKSRKAHF+APS+VRR +M+APLSKEL+ KY V ++P+RKDDEV VVRG +K REGK+ VYRKK+VIHI+RITREK NGATV+VGID SKV +TKLKL+K RK +L+RK + +KGK +EAEV A Sbjct: 1 MKFSTTVSSSRRKSRKAHFSAPSNVRRKLMSAPLSKELRTKYSVNAVPVRKDDEVSVVRGTYKGREGKIVQVYRKKWVIHIERITREKVNGATVNVGIDPSKVVVTKLKLDKDRKGLLDRKGKKDDKNKGKFSEAEVEA 139
BLAST of NO15G01560 vs. NCBI_GenBank
Match: XP_009413648.1 (PREDICTED: 60S ribosomal protein L26-2-like [Musa acuminata subsp. malaccensis]) HSP 1 Score: 182.6 bits (462), Expect = 9.000e-43 Identity = 99/145 (68.28%), Postives = 119/145 (82.07%), Query Frame = 0 Query: 1 MKFSPNVSSSRRKSRKAHFTAPSHVRRTIMTAPLSKELQAKYKVRSMPIRKDDEVQVVRGGFKNREGKVTTVYRKKFVIHIDRITREKANGATVHVGIDASKVHITKLKLNKARKEILERKARTGAG--SKGKVTEAEVGANMGG 144 MK++P VSSSRRKSRKAHFTAPS VRR +M+APLS +L+ KY VRS+P+RKDDEVQVVRG FK REGKV VYR+K+VIH++RITREK NGATV+VGI+ SKV ITKLKL+K RK +L+RKAR A +KGK + EV A + G Sbjct: 1 MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSADLRNKYNVRSVPVRKDDEVQVVRGTFKGREGKVVQVYRRKWVIHVERITREKVNGATVNVGINPSKVVITKLKLDKDRKALLDRKARGRAADKAKGKFSAEEVAAAVAG 145
BLAST of NO15G01560 vs. NCBI_GenBank
Match: PRW60014.1 (60S ribosomal L26-1 [Chlorella sorokiniana]) HSP 1 Score: 182.6 bits (462), Expect = 9.000e-43 Identity = 103/146 (70.55%), Postives = 118/146 (80.82%), Query Frame = 0 Query: 1 MKFSPNVSSSRRKSRKAHFTAPSHVRRTIMTAPLSKELQAKYKVRSMPIRKDDEVQVVRGGFKNREGKVTTVYRKKFVIHIDRITREKANGATVHVGIDASKVHITKLKLNKARKEILERK-ARTGAGSKGKVTEAEVGANMGGVD 146 MKFS V+SSRRK RKAHFTAPS VRR +M+APLS EL+ KY VRS+PIRKDDEV VVRG +K REGKV VYRKK+VIHI+RITREK NGATV+VG+D SKV +TKLKL+K R+++LERK A G KGK TEAEV A M VD Sbjct: 1 MKFSSAVTSSRRKCRKAHFTAPSSVRRKLMSAPLSTELRNKYGVRSVPIRKDDEVSVVRGTYKGREGKVVQVYRKKWVIHIERITREKVNGATVNVGVDPSKVVVTKLKLDKDRRQLLERKRAGKGLADKGKFTEAEVAA-MENVD 145
BLAST of NO15G01560 vs. NCBI_GenBank
Match: XP_020593265.1 (60S ribosomal protein L26-1-like [Phalaenopsis equestris]) HSP 1 Score: 181.8 bits (460), Expect = 1.500e-42 Identity = 98/141 (69.50%), Postives = 116/141 (82.27%), Query Frame = 0 Query: 1 MKFSPNVSSSRRKSRKAHFTAPSHVRRTIMTAPLSKELQAKYKVRSMPIRKDDEVQVVRGGFKNREGKVTTVYRKKFVIHIDRITREKANGATVHVGIDASKVHITKLKLNKARKEILERKARTGAG--SKGKVTEAEVGA 140 MK +P VSSSRRKSRKAHFTAPS VRR +M+APLS +L+ KY VRS+P+RKDDEVQVVRG +K REGK+ VYRKK+VIHI+RITREK NG+TV+VGID SKV ITKLKL+K RK +L+RKAR A +KGK + EV A Sbjct: 1 MKVNPRVSSSRRKSRKAHFTAPSSVRRKLMSAPLSSDLRGKYSVRSIPVRKDDEVQVVRGTYKGREGKIVQVYRKKWVIHIERITREKVNGSTVNVGIDPSKVVITKLKLDKDRKSLLDRKARGRAADKAKGKFSAEEVAA 141
BLAST of NO15G01560 vs. NCBI_GenBank
Match: PSC67418.1 (60S ribosomal L26-1 [Micractinium conductrix]) HSP 1 Score: 181.8 bits (460), Expect = 1.500e-42 Identity = 102/146 (69.86%), Postives = 117/146 (80.14%), Query Frame = 0 Query: 1 MKFSPNVSSSRRKSRKAHFTAPSHVRRTIMTAPLSKELQAKYKVRSMPIRKDDEVQVVRGGFKNREGKVTTVYRKKFVIHIDRITREKANGATVHVGIDASKVHITKLKLNKARKEILERK-ARTGAGSKGKVTEAEVGANMGGVD 146 MKFS VSSSRRK RKAHFTAPS +RR +M+APLS EL+ KY VRS+PIRKDDEV VVRG +K REGKV VYRKK+VIH++RITREK NGATV+VG+D SKV +TKLKL+K RK +LERK A G KGK +EAEV A M VD Sbjct: 1 MKFSATVSSSRRKCRKAHFTAPSSLRRKLMSAPLSTELRNKYGVRSVPIRKDDEVTVVRGNYKGREGKVVQVYRKKWVIHVERITREKVNGATVNVGVDPSKVVVTKLKLDKDRKALLERKRAGKGLADKGKFSEAEVAA-MENVD 145 The following BLAST results are available for this feature:
BLAST of NO15G01560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01560 ID=NO15G01560|Name=NO15G01560|organism=Nannochloropsis oceanica|type=gene|length=1776bpback to top protein sequence of NO15G01560.1 >NO15G01560.1-protein ID=NO15G01560.1-protein|Name=NO15G01560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=146bpback to top Synonyms
Publications
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