NO15G01470, NO15G01470 (gene) Nannochloropsis oceanica

Overview
NameNO15G01470
Unique NameNO15G01470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2772
Alignment locationchr15:413123..415894 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:413123..415894 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Homology
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BLAST of NO15G01470 vs. NCBI_GenBank
Match: EWM22452.1 (hypothetical protein Naga_100011g66 [Nannochloropsis gaditana])

HSP 1 Score: 290.8 bits (743), Expect = 1.500e-74
Identity = 279/924 (30.19%), Postives = 396/924 (42.86%), Query Frame = 0 
Query:    1 MNSGRLIVVEDEEYASLAS-SFSSSSRLVKVDGETGHVELMPARAPSPPRQIPYEPPPPHEAGPDTAPPLSSFGQSPSHAQSFIASSLPIAGGGQPAMPLMSALLXXXXXXIFFPRLQRQRRTEIRLSTSANITTSFFRRHAFKLLSSPILIMKDGLAWCF-GLVTGSTRKSEEEIRAQAGHAREELDKALEKDAPFEARRALERLVRL-KGGRVPVWLGEVVGPLKEEWGEVEEREEHRQQLVGELEEAIARCKETLERIKEDEDGSEEWSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWADIDDQEVRLVAALERAKETXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVSTLWSSVQRGERILKLWQRGKDEAAEVELAHHYGHAMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKLSFVVVEELAEGWMDEGVKENN----VSFPPEVDEAKASVGETETGPRGGMVEKVGEGEEEGKEGWEVCESESIGRSPEGEGGESQEDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVQQELRRQTTAARVIRLEGMLEKRRQYRARXXXXXXXXXXXXXXXXXXXXXXXXXELVEVRRRHQIECGKADESRRLKDQALFTYLLPVSMAVFGVVVYLASLSEESRGGEGAGMLLIEALWHVPFHDLLYGDCKARPQSLPSTSLTAPKIKVVHHNVKGIPGAAHSLSSSSSHFASSGLQLLNVLVGYVVPEGMDLGLTGAFGMTGCYVKRTLTLVANMGLMVLLHYLMGELGLGQHRAKLHVGMLLYCCREAFVRLTWRSLFSVRCVLGFHGLLWVMTAWKDEGHAFQYRHILFHRVVPLIALGVGVWDATRQVDPREALESFRLL 918
            M  GRL++VEDE+   L+S S  SS+RLVKVD ETGHVE+ PAR     R +   P   HE    + PP    G+ P+  +   A   P+ G       ++  +L      +F  RL R R    R  + A  T     R     + +P+      + WC  G   G  R  E ++R QA  AR  LD+AL +D    AR AL RL +L +    P+W+ E+  PL+EE  EVEEREE++ +LV  L  A+ARC+E L   ++         S                                          +   DQE+RLV +LE+  E                                          + V+ GE +LK W   +D      L+     A                                        ++    V+E+ +   D+G K  +    +S   E     +   +T T   G    +V   +EE +E  +    +S  +     GG   E+                                                          + ++ELRR   A R++ L+  LE R   R +  XXXXXXXX               +L+ VR        +A E+RR  DQALFTYLLPVS+  FG++V++ASL EE  G  G   LL+ ALW VP HDLLYGDC   P   PS++++    +VV H+VK  PGA       +S   + GL+ L   +   +P  +  G+ GA   TGCY +RTL L  N G++VLLH+++G LGLG HRAK+HV +LL+C + AF R+TWR L SVR +LGFH +L+ +TAWK  G +F +RH LF R++PL+A+ VG+ D    V P     S + L
Sbjct:    1 MKRGRLVIVEDEDNTHLSSTSAHSSARLVKVDAETGHVEIFPARKSLATRHV--APESAHEDAFHSDPP--GIGEVPATVEESNAILFPVVGKPSLCFSII-PMLFLFAVLLFAFRLCRARERLRRTGSGAGHTC--VSRQILAAVLTPLTFTNKIVKWCLEGHAAGLDR--EGDVREQAERARRALDRALARDEALGARDALRRLSQLAESPDFPLWMREIADPLEEEAWEVEEREEYQDELVRGLTAAMARCEEALGATRQRLSHQAHSCSLGLGVQRGMSPTSLVLSLP-----------------------SAAGDQEMRLVGSLEKVGEYCRGTGEAASRQAR----------------------------ALVEEGESLLKRWFEAQDSPILGALSQDEVSA---------------PFLTLGPGSVSWKPTPFRDVELIRDRVGGEEVKEIVKSG-DQGEKGASERAILSRREEAAGDPSEETDTRTATGGRAETEVVWAQEEAEEDRQGATRDSKVKQKGDGGGVGGEE--------VGNGSLLSHTLLTGVREGTERGMVVMGGGSGLLSVHREAVEMDGPVSLLGAFKEELRRHAGAVRMVELQRTLEGRGHERRQRRXXXXXXXXAERLRRLEGLRERGKDLMAVRACRAAGRLEAQEARRAGDQALFTYLLPVSLVAFGLLVWVASLEEEMEGRRGPS-LLLGALWRVPIHDLLYGDCLG-PSPTPSSTVS----RVVQHHVKRFPGADRPTLPRAS---TLGLETLARWLDLALPSSISTGVVGALEATGCYARRTLWLATNAGMLVLLHFVVGSLGLGPHRAKMHVAILLFCLKNAFARVTWRGLSSVRSILGFHFVLFALTAWKGFGRSFAHRHFLFRRLIPLLAVMVGLLDGAIYVGPAAVSGSLQAL 831
The following BLAST results are available for this feature:
BLAST of NO15G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM22452.11.500e-7430.19hypothetical protein Naga_100011g66 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001461NSK001461Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01470.1NO15G01470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|587537gene_4690Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100011g66gene7996Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01470.1NO15G01470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01470 ID=NO15G01470|Name=NO15G01470|organism=Nannochloropsis oceanica|type=gene|length=2772bp
ATGAACTCCGGGCGTCTCATTGTCGTAGAGGATGAGGAGTACGCGTCGTT
GGCCTCCTCTTTCTCGTCGTCCTCGCGGCTGGTCAAAGTGGATGGGGAGA
CGGGGCATGTGGAACTCATGCCTGCACGTGCCCCATCCCCGCCACGGCAA
ATACCCTACGAACCACCTCCCCCTCATGAAGCGGGCCCCGACACTGCTCC
CCCGCTCTCAAGCTTTGGGCAGAGTCCCTCCCACGCGCAAAGTTTTATAG
CTTCTTCCTTGCCAATAGCAGGAGGAGGACAGCCCGCCATGCCACTCATG
TCTGCGTTGCTCCTCCTTGCCCTCCTCCTCATCTTCTTTCCGAGACTACA
GCGACAGAGAAGAACCGAGATCAGACTTTCTACTTCAGCCAACATTACGA
CAAGTTTCTTTCGGCGTCATGCCTTTAAGCTCTTGTCGTCCCCTATTTTG
ATCATGAAAGATGGCTTGGCATGGTGCTTTGGCCTCGTCACGGGGAGCAC
CCGCAAGAGCGAAGAAGAAATTCGGGCACAAGCGGGGCATGCGCGAGAGG
AGTTAGACAAAGCGTTAGAAAAAGACGCTCCTTTCGAAGCACGACGGGCG
CTGGAAAGATTGGTGAGATTGAAAGGGGGACGGGTGCCTGTATGGCTGGG
GGAAGTGGTGGGGCCTCTGAAGGAAGAGTGGGGGGAAGTGGAAGAGAGAG
AGGAGCATCGACAGCAGCTGGTAGGAGAATTGGAGGAGGCAATTGCGAGG
TGCAAGGAGACGTTGGAGAGGATAAAGGAGGATGAGGACGGGTCGGAGGA
ATGGTCAAGTAAATCTTCTTTAAGTCTGTCCCCGTCGTCGTCTTCAACAG
CTTTGGCGATCCCTAGACGCACGGTCTCCGTCTCTTCATCTTCTCACTCC
TCCCACGCGCTTTCCTCGTCTTCTACTCTCTTGTGGGCAGACATTGACGA
CCAAGAAGTGCGTCTGGTGGCAGCTTTGGAACGAGCCAAGGAGACCCTCG
CAACAGCAGAAGCAGGAACAGCAGTAGCAACAGCAGCAGATGCGAACCTA
AATAAAGCCCCAGCAAAAGGAGGAGGAGGAGGAGGAGAAGGAGGAAGAGG
AGGAGTATCAACTTTGTGGTCATCGGTGCAGCGGGGGGAGAGGATTCTGA
AACTGTGGCAGCGAGGAAAGGACGAAGCGGCGGAAGTGGAGCTTGCACAT
CACTACGGCCATGCTATGAACCCCCCTCCTCCTTCAATGCCTGCAATACC
TGCACCGGGAGCAGCAGGAGGAGGGGGAAGCGGAGGAGGGAGAATTGCTT
GCAGCAGCAGCAGCAGCAGCAACACTCATTCTCGTAAATTGTCTTTCGTG
GTGGTGGAGGAACTGGCGGAGGGATGGATGGATGAAGGGGTAAAGGAGAA
CAATGTGTCGTTCCCTCCGGAGGTGGATGAGGCAAAAGCGAGTGTTGGAG
AGACAGAGACGGGTCCACGAGGAGGGATGGTAGAGAAGGTGGGGGAGGGA
GAGGAAGAAGGGAAGGAGGGCTGGGAGGTATGTGAGAGTGAGTCGATAGG
CCGGAGCCCTGAGGGTGAAGGGGGGGAGAGCCAGGAGGATAGGGCGAGTA
CCAACAGTATCAGCAGCAGCGCTAGCAGCGCCATGGTCGTGTCTAATGAC
CGCGAGCTGACGGCTGCGACAGCAACGGTCAGCGTGGAAGGAAGAATGTT
GGTTCACCGTCATCATCACCATCATCATCAGCAGCAAGCATTGATCATGG
GGGCGTTCACTCAAAGTGTGCAGCAGGAGCTTCGTAGACAGACAACGGCG
GCACGTGTGATTCGACTGGAGGGCATGCTTGAAAAACGACGCCAGTACCG
AGCGCGACAAAAGCGGGAGGAAGGGAGGGCAGCCAAGCAGGAACAATGTG
GACGAAAAGAGACTCTGAGACAACGAGGACGAGAGCTGGTCGAGGTGAGA
CGGCGACATCAGATAGAGTGTGGTAAAGCGGATGAGAGTCGTCGACTGAA
GGACCAGGCGCTGTTCACGTATTTGCTTCCAGTCAGCATGGCGGTTTTTG
GTGTGGTTGTGTACTTGGCTTCCCTGTCAGAAGAAAGTCGAGGAGGAGAA
GGCGCGGGTATGCTATTAATTGAGGCTCTGTGGCATGTCCCTTTCCACGA
CCTGCTCTACGGAGACTGCAAGGCCCGCCCACAATCCCTTCCTTCCACCT
CCTTGACCGCACCAAAAATCAAAGTGGTCCATCACAATGTGAAGGGCATC
CCTGGCGCTGCCCACTCTCTGTCGTCCTCTTCTTCCCATTTCGCGTCTTC
AGGATTACAGTTATTGAATGTGTTGGTGGGGTATGTGGTGCCTGAAGGGA
TGGATTTAGGTCTGACTGGTGCTTTTGGAATGACGGGATGCTACGTGAAG
CGGACGTTGACCCTGGTGGCCAATATGGGCTTGATGGTCTTGTTACATTA
CCTAATGGGTGAGTTAGGTCTAGGACAGCATAGAGCAAAGCTACATGTGG
GAATGTTGCTGTATTGCTGTCGAGAGGCCTTCGTACGGCTGACCTGGAGG
AGTCTCTTCTCTGTGAGGTGTGTGTTAGGGTTTCATGGCCTGCTCTGGGT
GATGACCGCGTGGAAGGATGAGGGCCACGCATTTCAATATCGTCACATTC
TCTTTCACCGTGTTGTGCCATTGATCGCGTTGGGGGTTGGGGTGTGGGAT
GCAACAAGGCAGGTGGATCCGAGGGAGGCCTTGGAAAGCTTTCGTTTGCT
GGCGAAGCAGATTGTAAATTAG
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protein sequence of NO15G01470.1

>NO15G01470.1-protein ID=NO15G01470.1-protein|Name=NO15G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=924bp
MNSGRLIVVEDEEYASLASSFSSSSRLVKVDGETGHVELMPARAPSPPRQ
IPYEPPPPHEAGPDTAPPLSSFGQSPSHAQSFIASSLPIAGGGQPAMPLM
SALLLLALLLIFFPRLQRQRRTEIRLSTSANITTSFFRRHAFKLLSSPIL
IMKDGLAWCFGLVTGSTRKSEEEIRAQAGHAREELDKALEKDAPFEARRA
LERLVRLKGGRVPVWLGEVVGPLKEEWGEVEEREEHRQQLVGELEEAIAR
CKETLERIKEDEDGSEEWSSKSSLSLSPSSSSTALAIPRRTVSVSSSSHS
SHALSSSSTLLWADIDDQEVRLVAALERAKETLATAEAGTAVATAADANL
NKAPAKGGGGGGEGGRGGVSTLWSSVQRGERILKLWQRGKDEAAEVELAH
HYGHAMNPPPPSMPAIPAPGAAGGGGSGGGRIACSSSSSSNTHSRKLSFV
VVEELAEGWMDEGVKENNVSFPPEVDEAKASVGETETGPRGGMVEKVGEG
EEEGKEGWEVCESESIGRSPEGEGGESQEDRASTNSISSSASSAMVVSND
RELTAATATVSVEGRMLVHRHHHHHHQQQALIMGAFTQSVQQELRRQTTA
ARVIRLEGMLEKRRQYRARQKREEGRAAKQEQCGRKETLRQRGRELVEVR
RRHQIECGKADESRRLKDQALFTYLLPVSMAVFGVVVYLASLSEESRGGE
GAGMLLIEALWHVPFHDLLYGDCKARPQSLPSTSLTAPKIKVVHHNVKGI
PGAAHSLSSSSSHFASSGLQLLNVLVGYVVPEGMDLGLTGAFGMTGCYVK
RTLTLVANMGLMVLLHYLMGELGLGQHRAKLHVGMLLYCCREAFVRLTWR
SLFSVRCVLGFHGLLWVMTAWKDEGHAFQYRHILFHRVVPLIALGVGVWD
ATRQVDPREALESFRLLAKQIVN*
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Synonyms
Publications