NO15G01450, NO15G01450 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01450 vs. NCBI_GenBank
Match: XP_005853792.1 (CCR4-NOT transcription complex subunit 10 [Nannochloropsis gaditana CCMP526] >EKU22565.1 CCR4-NOT transcription complex subunit 10 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 274.2 bits (700), Expect = 4.300e-70 Identity = 152/202 (75.25%), Postives = 168/202 (83.17%), Query Frame = 0 Query: 70 AGSEGGPASPQEQDDAVVEQVALLTLSYVYLCLQEPVLALRSSEALLSRGPGWM-SESKRVTAHTYAAEALCVLGQPEEALKHLLSSPGSTPLSEEAAVSALQEQRQSESKAVVMTADSFLPPEHFAAQARSALHLNLANVYLLQNNLAAAEECVRAGLAACPTSPDALRSLLFILLRTGNTTAALEALKSRRPLNLGGPAS 271 A ++ S QEQ DA VEQV LLTLSYVYLCL EPVLAL +E LL+RG GW E RV A TYAAEALCVLG+P+EALKHLL PG TPLSEEA VS+LQ+Q Q+ESK VV+TA+SFLPPEHFAA+AR ALHLNLANVYLLQNNLAAAE+CV GLAACPTSPDALR L+FILLRTGNT+AALEALKSRRPL+L P S Sbjct: 624 ASADKKRGSWQEQGDAQVEQVVLLTLSYVYLCLHEPVLALHYAELLLTRGAGWAEDEGNRVAARTYAAEALCVLGRPDEALKHLL--PGGTPLSEEAGVSSLQKQCQAESKRVVVTAESFLPPEHFAARARCALHLNLANVYLLQNNLAAAEKCVGLGLAACPTSPDALRCLVFILLRTGNTSAALEALKSRRPLSLSVPPS 823
BLAST of NO15G01450 vs. NCBI_GenBank
Match: EWM22463.1 (ccr4-not transcription complex subunit 10-like protein [Nannochloropsis gaditana]) HSP 1 Score: 272.7 bits (696), Expect = 1.200e-69 Identity = 151/202 (74.75%), Postives = 167/202 (82.67%), Query Frame = 0 Query: 70 AGSEGGPASPQEQDDAVVEQVALLTLSYVYLCLQEPVLALRSSEALLSRGPGWM-SESKRVTAHTYAAEALCVLGQPEEALKHLLSSPGSTPLSEEAAVSALQEQRQSESKAVVMTADSFLPPEHFAAQARSALHLNLANVYLLQNNLAAAEECVRAGLAACPTSPDALRSLLFILLRTGNTTAALEALKSRRPLNLGGPAS 271 A ++ S QEQ DA VEQV LLTLSYVYLCL EPVLAL +E LL+RG GW E RV A TYAAEALCVLG+P+EALKHLL PG TPLSEE VS+LQ+Q Q+ESK VV+TA+SFLPPEHFAA+AR ALHLNLANVYLLQNNLAAAE+CV GLAACPTSPDALR L+FILLRTGNT+AALEALKSRRPL+L P S Sbjct: 624 ASADKKRGSWQEQGDAQVEQVVLLTLSYVYLCLHEPVLALHYAELLLTRGAGWAEDEGNRVAARTYAAEALCVLGRPDEALKHLL--PGGTPLSEEVGVSSLQKQCQAESKRVVVTAESFLPPEHFAARARCALHLNLANVYLLQNNLAAAEKCVGLGLAACPTSPDALRCLVFILLRTGNTSAALEALKSRRPLSLSVPPS 823
BLAST of NO15G01450 vs. NCBI_GenBank
Match: OQR88054.1 (CCR4-NOT transcription complex subunit [Achlya hypogyna]) HSP 1 Score: 85.1 bits (209), Expect = 3.700e-13 Identity = 69/201 (34.33%), Postives = 96/201 (47.76%), Query Frame = 0 Query: 66 ESLTAGSEGGPASPQEQDDAV--VEQVALLTLSYVYLCLQEPVLALRSSEALLSRGPGWMSESKRVTAHTYAAEALCVLGQPEEALKHLLSSPGSTPLSEEAAVSALQEQRQSESKAVVMTADSFLPPEHFAAQARSALHLNLANVYLLQNNLAAAEECVRAGLAACPTSPDALRSLLFILLRTGNTTAALEALKSRRPLN 265 E+ A G A Q D + V Q AL+ L+Y LC+ EP LAL + LL+ +++ R A TY AEAL +L + EA GS + E V A + R++ AD +H+N A LLQ N+A AE+ V + CPTS AL+ L+++LLR GNT A++ LK R N Sbjct: 520 EARAAEKADGDADAQWAPDGLEAVRQKALVHLAYANLCMHEPHLALATCRELLALPT--LTKGNRYLARTYGAEALSLLSRSAEA--------GSLLKTNEMLVLAEEYAREAHVDVAATQAD---------------VHVNNATACLLQKNMAVAEQSVALAVRTCPTSRVALQQLVYVLLRKGNTKKAMQILKEARVTN 695
BLAST of NO15G01450 vs. NCBI_GenBank
Match: XP_012196628.1 (hypothetical protein SPRG_02674 [Saprolegnia parasitica CBS 223.65] >KDO32983.1 hypothetical protein SPRG_02674 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 84.3 bits (207), Expect = 6.300e-13 Identity = 69/196 (35.20%), Postives = 99/196 (50.51%), Query Frame = 0 Query: 71 GSEGGPASPQEQDDAV--VEQVALLTLSYVYLCLQEPVLALRSSEALLSRGPGWMSESKRVTAHTYAAEALCVLGQPEEALKHLLSSPGSTPLSEEAAVSALQEQRQSESKAVVMTADSFLPPEHFAAQARSALHLNLANVYLLQNNLAAAEECVRAGLAACPTSPDALRSLLFILLRTGNTTAALEALKSRRPLN 265 G+E +P DA+ V Q AL+ L+Y YL L EP LAL + LLS ++++ R +YAAEAL +L + EA PL + + L ++ E+K AA A++ +H+N A LLQ N+A AE+ V + CPTS AL L+++LLR GN+ AL+ LK R N Sbjct: 518 GNESEMEAPAWTADALDAVRQKALVHLAYAYLSLAEPQLALATCHELLS--VPTLTKAHRYLGRSYAAEALSLLSRSNEA----------APLLKTNEMVVLADEYAREAKG-------------DAASAQADVHVNNATACLLQKNMALAEQHVALAVRTCPTSRVALEQLVYVLLRKGNSKKALQILKEARVTN 688
BLAST of NO15G01450 vs. NCBI_GenBank
Match: CBJ25843.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 81.6 bits (200), Expect = 4.100e-12 Identity = 65/203 (32.02%), Postives = 88/203 (43.35%), Query Frame = 0 Query: 89 QVALLTLSYVYLCLQEPVLALRSSEALLSRGPGWMSESKRVTAHTYAAEALCVLGQPEEALKHLLSSPGSTPLSEEAA------------------------------VSALQEQRQSESKAVVMTADSFLPPEHFAAQARSALHLNLANVYLLQNNLAAAEECVRAGLAACPTSPDALRSLLFILLRTGNTTAALEALKSRR 262 +VAL L+YV+L L +PV AL + LL P +S AH YAAEALC+LG+P EAL+HL +P+SE A +AR++LH NLA V+ L +L AE C R + CP S LR+ +++L+R GN AL+ LK R Sbjct: 726 RVALADLAYVHLGLDDPVSALTYAGRLLETNPSAVSTH---LAHLYAAEALCLLGRPAEALEHL------SPISENACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEARASLHANLAVVHALSGSLGQAERCARTAMGICPGSGAVLRTAVYVLVRQGNIAEALQVLKEGR 919
BLAST of NO15G01450 vs. NCBI_GenBank
Match: GAQ79297.1 (CCR4-NOT transcription complex subunit 10 [Klebsormidium nitens]) HSP 1 Score: 79.3 bits (194), Expect = 2.000e-11 Identity = 68/201 (33.83%), Postives = 98/201 (48.76%), Query Frame = 0 Query: 67 SLTAGSEGGPASPQEQDDAVVEQVALLTLSYVYLCLQEPVLALRSSEALLSRGPGWMSESKRVTAHTYAAEALCVLGQPEEALKHL------LSSPGSTPLSEEAAVSALQEQRQSESKAVVMTADSFLPPEHFAAQARSALHLNLANVYLLQNNLAAAEECVRAGLAACPTSPDALRSLLFILLRTGNTTAALEALKSRR 262 SL AG A Q++ + +++Q A + L+YV LCL P AL EA L R G + + A TYAAEALC+LG+P EA+ HL L+S S PL + ++ Q + V D + AR+AL+ NLA +Y + LA A+ C+ C SP L + + + L+ AAL L+ R Sbjct: 633 SLKAGLAAYEAE-QKRKNELIQQSARVGLAYVDLCLGNPARALAHVEASL-RIAG-IGRVNSLLARTYAAEALCLLGRPGEAINHLSVALTELTSSSSDPLPPVPEQGPVPDKEQVAAVPVGKPRD--WQADLTGPGARAALYANLAALYAKKGELAEAQRCIARACQICRESPSVLLAGILVQLKANGEEAALSKLREAR 828
BLAST of NO15G01450 vs. NCBI_GenBank
Match: PNR48509.1 (hypothetical protein PHYPA_012986 [Physcomitrella patens]) HSP 1 Score: 79.0 bits (193), Expect = 2.600e-11 Identity = 65/196 (33.16%), Postives = 95/196 (48.47%), Query Frame = 0 Query: 82 QDDAVVEQVALLTLSYVYLCLQEPVLALRSSEALLSRGPGWMSESKRVTAHTYAAEALCVLGQPEEALKHL---LSSPGSTPLSEEAAVSALQEQRQSESKA-----------VVMTADSFLPPEHFAAQARSALHLNLANVYLLQNNLAAAEECVRAGLAACPTSPDALRSLLFILLRTGNTTAALEALKSRRPL 264 Q+ A + AL L+Y L + P+ ALRS+E LL R P + + H YAAEALC L +P+EAL+HL L+ S P S +L+ + S+A V D+ AR +L++NLA VY +Q NL A +A L PT+ A+ + +++ L+ +AL LK R L Sbjct: 642 QEAAALRMWALAALAYCQLGVSHPLRALRSAEQLL-RQPS-CARPYLLLGHVYAAEALCQLERPQEALEHLSTCLNESASEPTSSGTEEESLKWKYGDNSEASGDGEDGATYTVGALGDAASVARLTGTSARVSLYINLAAVYAMQGNLQEAHRLAQAALTMAPTNSTAMLAAVYVELKRERMASALALLKQHRHL 835
BLAST of NO15G01450 vs. NCBI_GenBank
Match: XP_024385051.1 (CCR4-NOT transcription complex subunit 10-like [Physcomitrella patens]) HSP 1 Score: 79.0 bits (193), Expect = 2.600e-11 Identity = 65/196 (33.16%), Postives = 95/196 (48.47%), Query Frame = 0 Query: 82 QDDAVVEQVALLTLSYVYLCLQEPVLALRSSEALLSRGPGWMSESKRVTAHTYAAEALCVLGQPEEALKHL---LSSPGSTPLSEEAAVSALQEQRQSESKA-----------VVMTADSFLPPEHFAAQARSALHLNLANVYLLQNNLAAAEECVRAGLAACPTSPDALRSLLFILLRTGNTTAALEALKSRRPL 264 Q+ A + AL L+Y L + P+ ALRS+E LL R P + + H YAAEALC L +P+EAL+HL L+ S P S +L+ + S+A V D+ AR +L++NLA VY +Q NL A +A L PT+ A+ + +++ L+ +AL LK R L Sbjct: 718 QEAAALRMWALAALAYCQLGVSHPLRALRSAEQLL-RQPS-CARPYLLLGHVYAAEALCQLERPQEALEHLSTCLNESASEPTSSGTEEESLKWKYGDNSEASGDGEDGATYTVGALGDAASVARLTGTSARVSLYINLAAVYAMQGNLQEAHRLAQAALTMAPTNSTAMLAAVYVELKRERMASALALLKQHRHL 911
BLAST of NO15G01450 vs. NCBI_GenBank
Match: XP_024396526.1 (CCR4-NOT transcription complex subunit 10-like [Physcomitrella patens] >PNR39600.1 hypothetical protein PHYPA_019879 [Physcomitrella patens]) HSP 1 Score: 77.4 bits (189), Expect = 7.700e-11 Identity = 62/196 (31.63%), Postives = 95/196 (48.47%), Query Frame = 0 Query: 82 QDDAVVEQVALLTLSYVYLCLQEPVLALRSSEALLSRGPGWMSESKRVTAHTYAAEALCVLGQPEEALKHL---LSSPGSTPLSEEAAVSALQEQRQSESKA-----------VVMTADSFLPPEHFAAQARSALHLNLANVYLLQNNLAAAEECVRAGLAACPTSPDALRSLLFILLRTGNTTAALEALKSRRPL 264 Q+ A + AL LSY L + P+ ALRS+E LL + + + H YAAEALC L +P+EAL+HL L+ + P + L+ + S+A V D+ AR++L++NLA VY +Q N+ A + LA PT+P A+ + +++ L+ +AL LK R L Sbjct: 634 QEVAALRMWALAALSYCQLGVGHPLRALRSAEQLLRQAS--CARPYMLLGHVYAAEALCHLERPQEALEHLSTCLNEATAEPTNAGTEEENLKWKGGDNSEASGDGEDGATFSVGALGDAASVARLTGTSARASLYINLAAVYAMQGNIQEAHRLAHSALAIAPTNPTAMLAAVYVELKLERMESALALLKQHRHL 827
BLAST of NO15G01450 vs. NCBI_GenBank
Match: OQS04931.1 (CCR4-NOT transcription complex subunit [Thraustotheca clavata]) HSP 1 Score: 77.0 bits (188), Expect = 1.000e-10 Identity = 62/182 (34.07%), Postives = 89/182 (48.90%), Query Frame = 0 Query: 87 VEQVALLTLSYVYLCLQEPVLALRSSEALLSRGPGWMSESKRVTAHTYAAEALCVLGQPEEALKHLLSSPGSTPLSEEAAVSALQEQRQSESKAVVMTADSFLPPEHF-AAQARSALHLNLANVYLLQNNLAAAEECVRAGLAACPTSPDALRSLLFILLRTGN--TTAALEALKSRRPLNL 266 + Q AL+ L+Y YLCL+EP LAL + LL+ P M+ +K + TYAAEAL +L + EA L ++ +V AD + H A ++ +H+N A +LLQ N+ AE+ V + C TS AL L+++LLR G T ALE L +R L Sbjct: 527 IRQKALVNLAYAYLCLKEPNLALATCRELLAL-PTCMNANKYL-GRTYAAEALSLLSRSSEATILL------------------------KTTEMVALADEYAKEAHLDTASVQADVHVNNATAFLLQKNMQMAEQNVALAVRTCQTSRAALEQLVYVLLRKGTMATEVALEELARQRGFEL 682 The following BLAST results are available for this feature:
BLAST of NO15G01450 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01450 ID=NO15G01450|Name=NO15G01450|organism=Nannochloropsis oceanica|type=gene|length=831bpback to top protein sequence of NO15G01450.1 >NO15G01450.1-protein ID=NO15G01450.1-protein|Name=NO15G01450.1|organism=Nannochloropsis oceanica|type=polypeptide|length=277bpback to top Synonyms
Publications
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