NO15G01420, NO15G01420 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01420 vs. NCBI_GenBank
Match: EWM22494.1 (SWAP/Surp [Nannochloropsis gaditana]) HSP 1 Score: 613.2 bits (1580), Expect = 1.100e-171 Identity = 413/515 (80.19%), Postives = 441/515 (85.63%), Query Frame = 0
Query: 1 MADAAVEDGTMTGGGALNDADVESEIIQGRSGKVTGIIYPPPDTRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEEPAEKKAKVEDGASALVDE------AASASTTAMSVSAAPTTTVGKASALGPIAKAALDKPEGPPPPLEFYITHPDGLNALDVEVIKLTAQYTAASGRQFLAALAQKEQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRAMVKQGLEKQKILERVVHRWEXXXXXXXXXXXXXXXXXXXXVAYQSVDWHDFVVVETITFAEDELMDVGMPDLAEGEEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKVVSSYVPRVAAGGGVVAPQMMLDPVTGREVPIADVGEHMRIQFLDPRWREEQKRALDKKKESALAEGADIAANVRSFAKKRTDIFGTTEEQERQILAGQEQFRVRQEENQRMIWQGG 510
MA+A V++ T G AL+DADVE+EIIQGRSGKVTGIIYPPPD RAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGE PAEKKAK+ + + E A T +VSAAPTTTV KAS LGPIAKAAL KPE PPPP EFYI+HPDGLN LDVE+IKLTAQYTAASGRQFLAALAQ+EQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTD+QRAMV+QGLE QK+L XXXXXXXXXXXXXXXXXXXX YQSVDWHDFVVVETITFAEDEL+DVGMP++ G E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IKVVSSY PRVAAGGG P++MLDPVTG+EVPIADVGEHMRIQFLDPRWR+EQ+RAL+K+KESALAEG DIAANVRSFAKKRTDIFGT+EE+ERQILA QE+FR RQEENQRMIWQGG
Sbjct: 1 MAEAPVKEEAST-GVALDDADVENEIIQGRSGKVTGIIYPPPDIRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEGPAEKKAKIAEVSPPAAGETRDGKAVADTGETPTAVSAAPTTTVSKASVLGPIAKAALHKPEAPPPPQEFYISHPDGLNPLDVEIIKLTAQYTAASGRQFLAALAQREQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDSQRAMVRQGLETQKVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQSVDWHDFVVVETITFAEDELLDVGMPEVGGGRANGE------------VSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKVVSSYKPRVAAGGGAARPEVMLDPVTGKEVPIADVGEHMRIQFLDPRWRDEQRRALEKRKESALAEGGDIAANVRSFAKKRTDIFGTSEEEERQILADQERFRARQEENQRMIWQGG 502
BLAST of NO15G01420 vs. NCBI_GenBank
Match: CBJ32127.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 335.1 bits (858), Expect = 5.800e-88 Identity = 272/495 (54.95%), Postives = 336/495 (67.88%), Query Frame = 0
Query: 28 QGRSGKVTGIIYPPPDTRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEEPAEKKAKVEDGASALVDEAASASTTAMSV---------SAAPTTTVGKASALGPIAKA--ALDKPEGPPPPLEFYITHPDGLNALDVEVIKLTAQYTAASGRQFLAALAQKEQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRAMVKQGLEKQKILERVVHRWEXXXXXXXXXXXXXXXXXXXXVAYQSVDWHDFVVVETITFAEDELMDVGMPDLAEGEEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKVVSSYVPRVAAGGGVVAPQMMLDPVTGREVPIADVGEHMRIQFLDPRWREEQKRALDKKKESALAEGADIAANVRSFAKKRTDIFGTTEEQERQILAGQEQFRVRQEENQRMIWQGGPA 512
Q GKV GIIYPPPD RA+VDKTA++VA+NGKSFE+RI +SEEGKS+KFNFM+P DPY AYYE +IR FEE G+ P AAP +V + + + PIAKA +L+K P EF + HP GL ALDV++IKLTAQ+TA GR FLA LA++E RN F+FLK +H LFSYFT+LVDAY KVLQPT QRA V+ G ++Q+ LER VHRWE +A++S+DWHDFVVVETI F +DEL++ + L E+G E XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX I VV+ Y P VA G P M++DP+TG V +++ +HMRIQ +DP+WREEQ RA K+K++ALAEG IAA+++S A+KR DIFG+ E++E+Q+L + R+EE R++W G A
Sbjct: 50 QPYQGKVKGIIYPPPDIRAIVDKTARFVAKNGKSFEERIQASEEGKSAKFNFMRPHDPYYAYYEFKIRDFEE-NGDAPRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKAAP-ASVSRKAVMAPIAKAVKSLNKAT-EPRAFEFSVGHPTGLTALDVDLIKLTAQFTAVGGRNFLAELAKREARNEQFQFLKHTHALFSYFTSLVDAYTKVLQPTATQRAYVESGRDRQQTLERCVHRWEFDREKKAKKQATLAAADADRIAFRSIDWHDFVVVETIEFPDDELVE-PLEGLDIAEDGIE-LPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIHVVTDYKPGVATGSATALPTMVIDPITGATVAASELSDHMRIQLMDPKWREEQARAAAKQKDTALAEGESIAASLKSLARKRGDIFGSAEDEEQQLLNESNARKKRKEEVTRVLWDGNIA 539
BLAST of NO15G01420 vs. NCBI_GenBank
Match: XP_005853795.1 (splicing factor 3A subunit 1 [Nannochloropsis gaditana CCMP526] >EKU22568.1 splicing factor 3A subunit 1 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 274.6 bits (701), Expect = 9.400e-70 Identity = 231/397 (58.19%), Postives = 259/397 (65.24%), Query Frame = 0
Query: 391 IKVVSSYVPRVAAGGGVVAPQMMLDPVTGREVPIADVGEHMRIQFLDPRWREEQKRALDKKKESALAEGADIAANVRSFAKKRTDIFGTTEEQERQILAGQEQFRVRQEENQRMIWQGGPAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLSESAYAAAHPGVVSVSVKVPVDDSNPSWNLAGQLLVLEVGSVMRTVKALKEQIAPMVGDMPLNKMQLRVGGEGGGGGVFLKDPQTLASYNLGAPGSGSVVELVTRSRGGRK 788
IKVVSSY PRVAAGGG P++MLDPVTG+EVPIADVGEHMRIQFLDPRWR+EQ+RAL+K+KESALAEG DIAANVRSFAKKRTDIFGT+EE+ERQILA QE+FR RQEENQRMIWQGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLSESAYA+A+ G S+S++ P D+S +WNL GQL+ LE+GSVM TV+ +KEQ++P++G MP NKMQLR + GVFLKD QTLASYNLGA GS +V+ELVTRSRGGRK
Sbjct: 48 IKVVSSYKPRVAAGGGAARPEVMLDPVTGKEVPIADVGEHMRIQFLDPRWRDEQRRALEKRKESALAEGGDIAANVRSFAKKRTDIFGTSEEEERQILADQERFRARQEENQRMIWQGGTGG---------QGTLGPGRAPGPSPVASSEPRPGFPQQTNSFAQPPAPAPSQARGPVPPVSSSLLKNTLAGGAGASSFPAPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGASNLVVGEAEKEKVSEEEQKPTLLSESAYASANTGAGSISIQAPQDESAATWNLKGQLVKLEIGSVMSTVREVKEQLSPLLGGMPPNKMQLRNAEQ----GVFLKDAQTLASYNLGAAGSSTVLELVTRSRGGRK 431
BLAST of NO15G01420 vs. NCBI_GenBank
Match: CCI42871.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 247.7 bits (631), Expect = 1.200e-61 Identity = 186/488 (38.11%), Postives = 252/488 (51.64%), Query Frame = 0
Query: 32 GKVTGIIYPPPDTRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEEPAEKKA-------------------KVEDGASALVDEAASASTTAMSVSAAPTTTVGKASALGPIAKAALDKPEGPPPPLEFYITHPDGLNALDVEVIKLTAQYTAASGRQFLAALAQKEQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRAMVKQGLEKQKILERVVHRWEXXXXXXXXXXXXXXXXXXXXVAYQSVDWHDFVVVETITFAEDELMDVGMPDLAEGEEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKVVSSYVPRVAAGGGVVAPQMMLDPVTGREVPIADVGEHMRIQFLDPRWREEQKRALDKKKESALAEGADIAANVRSFAKKRTDIFGTTEEQERQILAGQEQFRVRQEE 501
GKVTGIIYPPPD RAVVDKTAQ+VARNG++FE+R+ + E S+KF+F+KP DPY+ YYE ++ +F E KK+ S + A T T +++ +K PPPP + I HP L+ALD E++ LTAQYTA SG+ FLA LA +EQRNP F+FLKP+H LF+YFT LV++Y +VL + Q +++G+ + K+L+R VHR E +A +DWHDFVVVETI F ++E D A+ E A XXXXXXXXXXXXX IKVV YVP V PQ M+ V G+ + AD EHMRI ++P+WREE +R L+K+K+++ A G+ IA ++R FA KR DIF ++ E+E ++L E R R+E+
Sbjct: 22 GKVTGIIYPPPDIRAVVDKTAQFVARNGRNFERRL--AGETSSTKFSFLKPSDPYHTYYEFKVNEFTEKDFVIEENKKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKNEVIFEKKAVETLT-------AKVSRKLNEKTVEPPPPELYKIQHPT-LSALDQEIMYLTAQYTAHSGKSFLAGLATREQRNPQFDFLKPTHALFAYFTALVESYAQVLSKSKEQMHRIEEGMSRMKVLDRCVHRMEWMRMEHEKQAKEVAESDAERLALAQIDWHDFVVVETIRFNDEEDAQDEKADDAKDELPAS-------------------------------------------------XXXXXXXXXXXXXAEKPNIKVVDDYVPLVGKHAAKSVPQSMM-TVDGKTISSADANEHMRILLMNPKWREESQRHLEKQKDTSFAAGSAIADSLRRFATKRADIFSSSAEEEAKLL---ENERKREEK 446
BLAST of NO15G01420 vs. NCBI_GenBank
Match: CCA26819.1 (splicing factor 3 subunit putative [Albugo laibachii Nc14]) HSP 1 Score: 246.1 bits (627), Expect = 3.600e-61 Identity = 182/487 (37.37%), Postives = 255/487 (52.36%), Query Frame = 0
Query: 32 GKVTGIIYPPPDTRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGK-------------GEEPAEKKAKVEDGASALVDEAASASTTAMSVSAAPTTTVGKASALGPIAKAALDKPEGPPPPLEFYITHPDGLNALDVEVIKLTAQYTAASGRQFLAALAQKEQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRAMVKQGLEKQKILERVVHRWEXXXXXXXXXXXXXXXXXXXXVAYQSVDWHDFVVVETITFAEDELMDVGMPDLAEGEEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKVVSSYVPRVAAGGGVVAPQMMLDPVTGREVPIADVGEHMRIQFLDPRWREEQKRALDKKKESALAEGADIAANVRSFAKKRTDIFGTTEEQERQILAGQEQFRVRQEE-NQRM 505
GKVTG+IYPPPD RAVVDKTAQ+VARNG++FE+R+ + E S+KF+F+KP DPY+AYYE ++ +F E + + A T T +++ +K PPPP + I HP L+ALD E++ LTAQYTA SG+ FLA LA +EQRNP F+FLKP+H LF+YFT LV++Y +VL + Q +++G+ + K+L+R VHR E +A +DWHDFVVVETI F ++E + + A+ E A XXXXXXXXXXXX +IKVV YVP V PQ M+ V G+ + AD EHMRI ++P+WREE +R L+K+K+++ A G+ IA ++R FA KR DIF ++ E+E ++L +++ R+E+ NQ M
Sbjct: 222 GKVTGLIYPPPDIRAVVDKTAQFVARNGRNFERRL--AGETSSTKFSFLKPSDPYHAYYEFKVNEFTEKEFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNQVIFEKKAVETLT-------AKVSRKLNEKTIEPPPPELYKIQHPT-LSALDQEIMYLTAQYTAHSGKSFLAGLATREQRNPQFDFLKPTHALFAYFTALVESYAQVLSKSKDQMHRIEEGMSRMKVLDRCVHRMEWMRMEHEKQAKEVAESDAERLALAQIDWHDFVVVETIRFNDEEDVQDEKTEDAKEERPAS-------------------------------------------------DXXXXXXXXXXXXIEKPDIKVVDDYVPLVGKNASKSVPQSMM-TVDGKTISSADANEHMRILLMNPKWREESQRHLEKQKDTSFAAGSAIADSLRRFATKRADIFSSSAEEEARLLENEKK---REEKWNQSM 645
BLAST of NO15G01420 vs. NCBI_GenBank
Match: OQR97222.1 (splicing factor 3 subunit [Achlya hypogyna]) HSP 1 Score: 239.6 bits (610), Expect = 3.300e-59 Identity = 188/481 (39.09%), Postives = 255/481 (53.01%), Query Frame = 0
Query: 18 NDADVESEIIQGRSGKVTGIIYPPPDTRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEEPAEKKAKVEDGASALVDEAASASTTAMSVSAAP-TTTVGKASALGPIAKAALDKPEGPPPPLEFYITHPDGLNALDVEVIKLTAQYTAASGRQFLAALAQKEQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRA--------MVKQGLEKQKILERVVHRWEXXXXXXXXXXXXXXXXXXXXVAYQSVDWHDFVVVETITFAEDELMDVGMPDLAEGEEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKVVSSYVPRVAAGGGVVAPQMMLDPVTGREVPIADVGEHMRIQFLDPRWREEQKRALDKKKESALAEGADIAANVRSFAKKRTDIFGTTEEQERQILA 490
++ADV + + GR VTGIIYPPPD RAVVDKTAQ+VA+NG++FE++I + E S+KF+F+KPGDPYNAYYEH++ +FE E V P VGKA + + + PP +F HP L A D E++ LTAQYTA G+ FL+ LA +EQRNP F+F+ P H LF+YFT LV++Y K+L AQR +++G+++ ++L+R VH+ E +AY +DWHDFV+VETI F + +L+ E + G XXXXXXXXXXXXXXXXXXXX EIKVV +YVP+ A G P + + V G+ VP D EHMRI + P++REE +R L+K+K+S A GA IA N + FA KR+DIF ++ E E ++ A
Sbjct: 4 SEADVATGAVHGR---VTGIIYPPPDIRAVVDKTAQFVAKNGRAFERKI--AGEVISAKFSFLKPGDPYNAYYEHKVSEFENALNEPEKLPXXXXXXXXXXXXXXXXXXXXXXXXVERKPIEAVVGKA-----LRNLSDSDKKRPPAEEQFKQKHPT-LTAQDQEIMYLTAQYTAVGGKAFLSGLATREQRNPQFDFINPVHPLFAYFTVLVESYAKIL-TAKAQRGKKANPLLERLEEGVDRMRVLDRCVHKLEFMRLEAESKQKEEAENDAERLAYMQIDWHDFVIVETIVFDDSDLIADAPNPYLEDDPG-------------------------------------------QTAXXXXXXXXXXXXXXXXXXXXPSEIKVVENYVPKAATSTG---PSVSMLTVDGQAVPTTDANEHMRILLMAPKYREETQRHLNKQKDSPFAPGAAIADNFKRFAAKRSDIFSSSAEDEAKLTA 426
BLAST of NO15G01420 vs. NCBI_GenBank
Match: OQR93692.1 (splicing factor 3 subunit [Thraustotheca clavata]) HSP 1 Score: 238.4 bits (607), Expect = 7.400e-59 Identity = 188/455 (41.32%), Postives = 254/455 (55.82%), Query Frame = 0
Query: 32 GKVTGIIYPPPDTRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEG--KGEEPAEKKAKVEDGASALVDEAASASTTAMSVSAAPTTTVGKASALGPIAKAALDKPEGPPPPLEFYITHPDGLNALDVEVIKLTAQYTAASGRQFLAALAQKEQRNPLFEFLKPSHILFSYFTTLVDAYIKVL-------QPTDAQRAMVKQGLEKQKILERVVHRWEXXXXXXXXXXXXXXXXXXXXVAYQSVDWHDFVVVETITFAEDELMDVGMPDLAEGEEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKVVSSYVPRVAAGGGVVAPQMMLDPVTGREVPIADVGEHMRIQFLDPRWREEQKRALDKKKESALAEGADIAANVRSFAKKRTDIF 478
G+VTGIIYPPPD RAVVDKTAQ+VA+NG++FE++I + E S+KF+F+K DPY+AYYEH++ +FE+G + E+PA + AA VGK+ + + PPP +F HP L A D E++ LTAQYTA G+ FL+ LA +EQRNP F+F+ P H LF+YFT LV++Y K+L + ++ ++ G E+ ++L+R VH+ E +AY +DWHDFVVVETITF + +L P E E+ A XXXXXXXXXXXXXXXXXXXXXXXX EIKVV +YVP+V++G V P + +D G+ + A+ EHMRI +DP++REE +R L+K+K + A GADIA N + FA KRTDIF
Sbjct: 14 GRVTGIIYPPPDIRAVVDKTAQFVAKNGRAFERKI--AGEVISAKFSFLKDSDPYHAYYEHKVDEFEKGLNEPEKPAXXXXXXXXXXXXXXXXXXXXXXXXXXIEAA----VGKS-----FRNLSESDKKKPPPEEQFKQKHPT-LTAQDQEIMYLTAQYTAVGGKAFLSGLATREQRNPQFDFINPVHPLFAYFTFLVESYAKILTAKAQYGKKSNPLIERLEDGFERMRVLDRCVHKLEYMRLEAEAKQKEEAENDAERLAYMQIDWHDFVVVETITFDDSDLATDIAPYYIEEEQPA------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXSEIKVVENYVPKVSSGPSVSVPMLSVD---GQAISTANANEHMRILLMDPKYREETQRHLNKQKITPFAPGADIADNFKRFAAKRTDIF 411
BLAST of NO15G01420 vs. NCBI_GenBank
Match: XP_002905309.1 (splicing factor 3 subunit, putative [Phytophthora infestans T30-4] >EEY68150.1 splicing factor 3 subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 235.3 bits (599), Expect = 6.300e-58 Identity = 197/447 (44.07%), Postives = 249/447 (55.70%), Query Frame = 0
Query: 32 GKVTGIIYPPPDTRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEE-PAEKKAKVEDGASALVDEAASASTTAMSVSAAPTTTVGKASALGPIAKAALDKPEGPPPPLEFYITHPDGLNALDVEVIKLTAQYTAASGRQFLAALAQKEQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRAMVKQGLEKQKILERVVHRWEXXXXXXXXXXXXXXXXXXXXVAYQSVDWHDFVVVETITFAEDELMDVGMPDLAEGEEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKVVSSYVPRVAAGGGVVAPQMMLDPVTGREVPIADVGEHMRIQFLDPRWREEQKRALDKKKESALAEGADIAANVRSFAKKRTDIF 478
G+VTGIIYPPPD RAVVDKTAQ+VA NG++FE RI+ E S+KF+F++ DPY+AYYEH++ +F K + PA + + E A + + +V +AK + PPP F I HP L+ALD E++ LTAQYTA SG FL+ LA +EQRNP F+FLKP+H LF+YFT LV++Y VL DAQ ++ G+E+ K+L+R VHR E A VDWHDFV+VETI F XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VV YVP+ AG Q L V G+ + A+ EHMRI ++P+WREE +R L+K+KES+ A G+ IA ++R FA KR DIF
Sbjct: 14 GRVTGIIYPPPDIRAVVDKTAQFVANNGRAFESRIVG--ERVSAKFSFLRESDPYHAYYEHKVSEFTVKKEDPLPAPEPQQPEHTAEGQQETTQEIAKAVETVGDVVVEKKAVQDVTAQVAKNIRGRELEPPPEEIFIIKHPT-LSALDQEIMYLTAQYTALSGSSFLSGLATREQRNPQFDFLKPTHPLFAYFTALVESYTLVLAKQDAQMKRIEDGMERMKVLDRCVHRMEWQRTEQEREDKEAAEGDAERRALAQVDWHDFVIVETINF---------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVEDYVPQATAG----TTQQPLLSVDGKTLSSAEANEHMRILLMNPKWREETQRHLEKQKESSYAAGSAIADSLRRFATKRADIF 402
BLAST of NO15G01420 vs. NCBI_GenBank
Match: XP_024584279.1 (probable splicing factor 3a subunit 1 [Plasmopara halstedii] >CEG47910.1 probable splicing factor 3a subunit 1 [Plasmopara halstedii]) HSP 1 Score: 235.0 bits (598), Expect = 8.200e-58 Identity = 206/457 (45.08%), Postives = 266/457 (58.21%), Query Frame = 0
Query: 32 GKVTGIIYPPPDTRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEEPAEKKAKVEDGASA-----LVDEAASASTTAMSVSAAPT---TTVGKASALGPIAKAAL---DKPEGPPPPLEFYITHPDGLNALDVEVIKLTAQYTAASGRQFLAALAQKEQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRAMVKQGLEKQKILERVVHRWEXXXXXXXXXXXXXXXXXXXXVAYQSVDWHDFVVVETITFAEDELMDVGMPDLAEGEEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKVVSSYVPRVAAGGGVVAPQMMLDPVTGREVPIADVGEHMRIQFLDPRWREEQKRALDKKKESALAEGADIAANVRSFAKKRTDIF 478
G+VTGIIYPPPD RAVVDKTAQ+VA NG++FE RI+ E S+KF+F++ DPY+AYYEH++ +E AK E+G S V+ + T M V AA T V K + A+AA+ DK PPP +F I HP L+ALD E++ LTAQYTA SG FL+ LA +EQRNP F+FLKP+H LF+YFT LV++Y V+ + Q +++G+++ K+L+R V+R E A +DWHDFVVVETI F XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IK+V +VP+V G Q +L V G+ + A+ EHMRI ++P+WREE +R L+K+KES+ A G+ IA ++R FA KR+DIF
Sbjct: 14 GRVTGIIYPPPDIRAVVDKTAQFVASNGRAFESRIVG--ERMSAKFSFLRESDPYHAYYEHKV-----------SELIAKKEEGVSVESEQQQVNGSEEQVKTQMIVKAAETAGDVVVEKKAVQDVAAQAAIKLKDKELEPPPDEKFIIKHPT-LSALDQEIMYLTAQYTALSGSSFLSGLATREQRNPQFDFLKPTHPLFAYFTALVESYTLVMAKQEMQMKRIEEGMDRMKVLDRCVYRMEWQRTEQERKDREVAESDAERRALAQIDWHDFVVVETINF------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIKIVEDHVPQVT---GATTQQPLLS-VDGKTISSAEANEHMRILLMNPKWREETQRHLEKQKESSYAPGSAIADSLRRFATKRSDIF 404
BLAST of NO15G01420 vs. NCBI_GenBank
Match: XP_008616178.1 (hypothetical protein SDRG_11902 [Saprolegnia diclina VS20] >EQC30325.1 hypothetical protein SDRG_11902 [Saprolegnia diclina VS20]) HSP 1 Score: 233.8 bits (595), Expect = 1.800e-57 Identity = 186/482 (38.59%), Postives = 254/482 (52.70%), Query Frame = 0
Query: 18 NDADVESEIIQGRSGKVTGIIYPPPDTRAVVDKTAQWVARNGKSFEQRILSSEEGKSSKFNFMKPGDPYNAYYEHRIRQFEEGKGEEPAEKKAKVEDGASALVDEAASASTTAMSVSAAPT-TTVGKASALGPIAKAALDKPEGPPPPLEFYITHPDGLNALDVEVIKLTAQYTAASGRQFLAALAQKEQRNPLFEFLKPSHILFSYFTTLVDAYIKVLQPTDAQRA--------MVKQGLEKQKILERVVHRWEXXXXXXXXXXXXXXXXXXXXVAYQSVDWHDFVVVETITFAEDELMDVGM-PDLAEGEEGAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEIKVVSSYVPRVAAGGGVVAPQMMLDPVTGREVPIADVGEHMRIQFLDPRWREEQKRALDKKKESALAEGADIAANVRSFAKKRTDIFGTTEEQERQILA 490
++ DV++ ++ GR VTGIIYPPPD RAVVDKTAQ+VA+NG++FE++I + E S+KF+F+K GDPY+AYYEH++ FE E V P VGKA + + + PP +F HP L A D E++ LTAQ+TA G+ FL+ LA +EQRNP F+F+ P H LF+YFT LV++Y K+L AQR + +G+++ +L+R VH+ E +AY +DWHDFV+VETI F + +L+ G P E + + XXXXXXXXXXXXXXXXXXXX E+KVV +YVP+ AA G M +D G V AD EHMRI + P++REE +R L+K+KES A GA IA N + FA KR+DIF ++ E+E ++ A
Sbjct: 4 SEVDVDTGVVHGR---VTGIIYPPPDIRAVVDKTAQFVAKNGRAFERKI--AGEVISAKFSFLKTGDPYHAYYEHKVEDFERQLNEPEKPXXXXXXXXXXXXXXXXXXXXVAVEVVERKPVEAVVGKA-----LRNLSESDKKRPPAEEQFKQKHPT-LTAQDQEIMYLTAQFTAVGGKAFLSGLATREQRNPQFDFINPVHPLFAYFTFLVESYAKIL-TAKAQRGKKANPLLERLDEGVDRMSVLDRCVHKLEFMRIENEAKQKEEAESDAERLAYMQIDWHDFVIVETIVFDDSDLVTDGTNPYYLEDDPTTQ---------------------------------------ATSAPXXXXXXXXXXXXXXXXXXXXPSELKVVENYVPKAAASSGASVNMMSVD---GHAVSTADANEHMRILLMAPKYREETQRHLNKQKESPFAPGAAIADNFKRFASKRSDIFSSSAEEEAKLTA 431 The following BLAST results are available for this feature:
BLAST of NO15G01420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01420 ID=NO15G01420|Name=NO15G01420|organism=Nannochloropsis oceanica|type=gene|length=2968bpback to top protein sequence of NO15G01420.1 >NO15G01420.1-protein ID=NO15G01420.1-protein|Name=NO15G01420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=788bpback to top Synonyms
Publications
|