NO15G01140, NO15G01140 (gene) Nannochloropsis oceanica

Overview
NameNO15G01140
Unique NameNO15G01140
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1463
Alignment locationchr15:328934..330396 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:328934..330396 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G01140 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01140.1NO15G01140.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|565457gene_4657Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01140.1NO15G01140.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01140 ID=NO15G01140|Name=NO15G01140|organism=Nannochloropsis oceanica|type=gene|length=1463bp
GTGCAGGCTCGCTGATGATGGTGATTGATTGAATCGCTCACGATCGATCC
GTTGCAGACGGAAAGGACATGTCCGTGCCCGTGCATTTCTTTCTATGTGT
GGCCTGATTCAGATTTACTGACCCCGTGGTAATGCATGAGAAAGGCAAGA
ACAAATAATGTGCAAATAACAGTGCATCTCGGCTATTCTTCCTCTTTTCT
CCACCTCTCCTCCTTCTCCTCCTCCTCCCCCTCTTGCCCCTCTCCTTCTT
CTCCTCATTTTCTTCTTCCTCTTCTTTTTCTTCTTCTTCTCCTCCTCTCC
TCCTCTCCTCCTCCTCCCCCTCCTCCTCCTCCTCCTCTTCCTTCCGTTCT
TCTTCTTTTTTCTCCTCCTCCTCTTCCTCTTCTCCTCCTGCTTTTCCTCT
TCCCCCTTCTCCTCCTCCTCCCGCTTCTCCTGCTGCTTCTCTTTCTTCAT
CTCCATCCCTTTCTTCCCTCATACCTCTTTATCTCGTCGCTCTACGCATA
GTGCAGACATTCATGCTTTTCATAGTTACCTTTTCTTTGAAATCCCTTTT
CACCAAACTTCCTGAAGCCCCCTATCTCACTTTCTCTTCCTCCCCTCAAA
CCCCCAAGACCGACAGGCATGTCAATCCTGGTCCTCGACTTGAAGAATAA
CTGGCATGTGGCCAACGTTGAAAATCGCAGTGAGTCCTTGGAGGAACAGC
AGCGAAGTGTGATCCTTCACGGCCCTTTGAGCTGGGAAGAGGTCGTGATT
TTTGTTGAGGCGGCTCGACGGCCTCTGCCCATGCCTTCATTTTTGCTTTG
GCACCCCTCTTTTCCGCATAACAATTGGAAACACTTTGAGGAGgtaagca
cgccgtcttagatgcaaaagcataatcttgtacagcccattggctaaact
ctatccgttcctcctcctctcttacatagATTGTAGGCCTGCAGGACGGC
ATGGATCCGTACGGAGGAACGGCAAAGAAAAGCGACAGCCACCTTCACGT
AGATAAGACTTGCGAGCTGAGGGAGGAAATGTTTATGAGAGGCGATGAAG
AGGAGGAAAGAGGCTTGGGTAAGGAGGAGGGCATGGATAGCATGGGTAAG
GAGGAGGGCATGGATAGCATGGTGGCGGGGGTGGAGGAGGAGGAGGAGGA
GGAGGAAAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAAGAGATCAGAAACGATGCGATACCAGCAGCGGTGGTGTACGCAGAG
CCACTGGCGGACGAAAAAGAAACGGCCAGTAAGGAACAAGACGAGAAAGC
ACTGGGATACGTCCCCCTGGTGGCAACCTCAGTGGCTATCATCCTGGAGC
AATCTCGGAATATCGCGCTCAAGCGGGGGGCTCTTCAAAATTTGGGGGTC
GGGTATCTCAATCGGGTCCAGATTTTTGTTTGTGAGAGACTCTTGGTCTT
GACAGAAGACTAA
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protein sequence of NO15G01140.1

>NO15G01140.1-protein ID=NO15G01140.1-protein|Name=NO15G01140.1|organism=Nannochloropsis oceanica|type=polypeptide|length=253bp
MSILVLDLKNNWHVANVENRSESLEEQQRSVILHGPLSWEEVVIFVEAAR
RPLPMPSFLLWHPSFPHNNWKHFEEIVGLQDGMDPYGGTAKKSDSHLHVD
KTCELREEMFMRGDEEEERGLGKEEGMDSMGKEEGMDSMVAGVEEEEEEE
EKEEEEEEEEEEEEEEEEIRNDAIPAAVVYAEPLADEKETASKEQDEKAL
GYVPLVATSVAIILEQSRNIALKRGALQNLGVGYLNRVQIFVCERLLVLT
ED*
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Synonyms
Publications