NO15G01080, NO15G01080 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G01080 vs. NCBI_GenBank
Match: EWM22443.1 (Tic22-like protein [Nannochloropsis gaditana]) HSP 1 Score: 578.2 bits (1489), Expect = 1.900e-161 Identity = 290/379 (76.52%), Postives = 322/379 (84.96%), Query Frame = 0 Query: 1 MAGRRRSHTSLMLLVPVVAMLLN--VVLAFQP---RVVRCSPQVMRSRATIMSFEGE-----SIHAEQEPQEGHMLSVWKAMRTKLSVGTESLGKLVFGTGAAVVAGFGAPPSVDLMRAVKDGRQDMGTVLQSMVHPPSAEAFSLKPFSRRSLKEKLASVPCFLVCNQQGSPYLVPLETGFDVGVVFLDPADAEEMLQSMVQNPQTADARILVMGLDKGLELVQSEPRRNGNHMLVFQFCPSVQQLKNANGFRKAGWKAILDQRPDKWRFGFNRQGVRNAGLPVFYCPDLRIAKGREMVKPIFFSMEDLYYAWDRSTAGKHGAAPGDVKTLDLLRVVEWMLNEPEQTKLVGFHASTQAQDYVETQLRVKGGKSRPVRAS 370 MA R S S MLLV ++ +L+ VLAFQP + V R+T + EG+ S +E Q +S W ++TKLS G E++GKL FGTGAA+VAGFGAP +VD+++ VK+GR D+GT LQ +V PPSAEAFSLKPFSRR+LKEKLASVPCFLVCNQQGSPYLVPLETGFDVGVVFLDPADAEEMLQSMVQNPQTADAR+LVMGLDKGLELVQSEPRRNGNHMLVFQFCPSVQQLKNANGFRK GWKA+LD+RPDKWRFGFNRQGVRNAGLPVFYCPDLRIAKGREMVKP+FFSMEDLYYAWDRSTAGKHGAAPG+VKTLD LRVVEWMLNEPEQT+LVGFHASTQAQ+YVE QLRVKGGK+RP+RAS Sbjct: 8 MARCRGSGASFMLLVLLLVEVLHGVCVLAFQPGSSGPFAHANGVHHRRSTRCASEGDKGETRSACGREEGQTSRTVSAWGTLKTKLSFGVENMGKLTFGTGAAIVAGFGAPQTVDVIKGVKEGRNDVGTALQRIVRPPSAEAFSLKPFSRRTLKEKLASVPCFLVCNQQGSPYLVPLETGFDVGVVFLDPADAEEMLQSMVQNPQTADARVLVMGLDKGLELVQSEPRRNGNHMLVFQFCPSVQQLKNANGFRKVGWKAVLDKRPDKWRFGFNRQGVRNAGLPVFYCPDLRIAKGREMVKPVFFSMEDLYYAWDRSTAGKHGAAPGEVKTLDFLRVVEWMLNEPEQTRLVGFHASTQAQEYVEAQLRVKGGKARPIRAS 386
BLAST of NO15G01080 vs. NCBI_GenBank
Match: XP_005715824.1 (unnamed protein product [Chondrus crispus] >CDF36005.1 unnamed protein product [Chondrus crispus]) HSP 1 Score: 130.2 bits (326), Expect = 1.300e-26 Identity = 82/251 (32.67%), Postives = 135/251 (53.78%), Query Frame = 0 Query: 124 MVHPPSAEAFSLKPFSRRSLKEKLASVPCFLVCNQQGSPYLVPLE-TGFDVGVVFLDPADAEEMLQSMVQNPQTADARILVMGLDKGLELVQSEPRRNG-------NHMLVFQFCPSVQQLKNANGFRKAGWKAILDQRPDKWRFGFNRQGVRNAGLPVFYCPDLRIAKGREMVKPIFFSMEDLYYAWDR-STAGKHGAAPGDVKTLDLLRVVEWMLNEPE-QTKLVGFHASTQAQDYVETQLRVKGGKSR 365 ++ P +A AF+ FS++++ EKL+ VP F V N G PYL ++ +G +G++F DA ML+ M +NP +DAR+ +MGLDK E+V+++P+ +G +VF+F P +Q+K A G ++ K R R+GV G+PVF L + KG E V P+F + EDL AW + + K V +LL +++ M ++ E + + +GF A + +YV + G++R Sbjct: 8 LLTPVAAPAFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLANMDGSGSQIGLIFFSHHDALNMLKDMKKNPGASDARVYIMGLDKAYEMVKAKPQPSGIRGAAGEELTMVFRFFPDSKQVKAAEGLQR------------KLR---RRRGVE--GIPVFVAKGLTLRKGSENVVPLFLTKEDLDSAWSKLRDSNKDLPNNASVVVGNLLYIIQQMESDGEPELRNLGFFAPKASVEYVTKEQAGPTGQAR 241
BLAST of NO15G01080 vs. NCBI_GenBank
Match: CBJ49281.1 (Tic22-like [Ectocarpus siliculosus]) HSP 1 Score: 119.8 bits (299), Expect = 1.800e-23 Identity = 90/295 (30.51%), Postives = 142/295 (48.14%), Query Frame = 0 Query: 69 WKAMRTKLSVGTESLGKLVFGTGAAVVAGFGAPPSVDLMRAVKDGRQDMGTVLQSMVHPPSAEAFSLKPFSRRSLKEKLASVPCFLVCNQQGSPYLVPLETGF-DVGVVFLDPADAEEMLQSMVQ-NPQTADARILVMGLDKGLELVQSEPRRNG-------NHMLVFQFCPSVQQLKNANGFRKAGWKAILDQRPDKWRFGFNRQGVRNAGLPVFYCPDLRIAKGREMVKPIFFSMEDLYYAWDRSTAGKHG-AAPGDVKTLDLLRVVEWMLNEPEQTKLVGFHASTQAQDYVE 354 W R L+ G SL F GA ++G S D+ + + R V+ SAEA L+PF +R+++EKLA++P F+V N++GSPYL P E G + V F + DA+EML MVQ + +ARILV+ ++K +V++ P+ G + + F+ P + + A R+ G LD P N +PVFY L + + +VKP+F DL AW ++ A A VK ++ V+ M ++ GF AST+ ++++ Sbjct: 100 WAGARRSLARGAASLA--TFTVGATALSGM----SADVQHRL-NSRDGAAVVVSIPAAMESAEASVLRPFEKRTVEEKLANLPAFMVTNKKGSPYLSPTEPGEPQMAVFFTNVDDAKEMLMEMVQESTYQNEARILVVSMEKAYGMVKAGPKLTGYQNDEGVDERMDFKLEPDMHSFQKA---RRLG----LDVSP----------AAANIDVPVFYVEGLEVKRDGGLVKPLFMDPADLVEAWKKAAASNPDMPAEPTVKVFNMPDVIVAM-ELTDEFNQFGFFASTEGAEFIK 369
BLAST of NO15G01080 vs. NCBI_GenBank
Match: XP_001713539.1 (Tic22 [Guillardia theta] >AAK39834.1 Tic22 (nucleomorph) [Guillardia theta]) HSP 1 Score: 117.1 bits (292), Expect = 1.200e-22 Identity = 62/228 (27.19%), Postives = 115/228 (50.44%), Query Frame = 0 Query: 138 FSRRSLKEKLASVPCFLVCNQQGSPYLVPLETGFDVGVVFLDPADAEEMLQSMVQNPQTADARILVMGLDKGLELVQSEPRRNG-------NHMLVFQFCPSVQQLKNANGFRKAGWKAILDQRPDKWRFGFNRQGV--RNAGLPVFYCPDLRIAKGREMVKPIFFSMEDLYYAWD-RSTAGKHGAAPGDVKTLDLLRVVEWMLNEPEQTKLVGFHASTQAQDYVETQ 356 +S ++L +K+ +P F V N G PYL G +G++F DA E+L++M +N Q+ DARI +MG DK ++V S +G + ++F+F P +Q+KNANG N + + G+P+FY ++I +G + + P+FFS+ED YAW+ ++K +DL+ ++ + + + GF ++++ +++ + Sbjct: 82 YSEKNLHQKMTQIPVFAVTNGTGQPYLANTSNGDQIGLIFFSHEDALELLKNMKKNHQSLDARITIMGFDKAYKMVSSGNSSSGLKDNYGQDLKMIFKFYPDQKQIKNANGI-------------------INNINIFSKFRGIPLFYNESVKINRGNDEITPLFFSLEDFNYAWELMKVRNPDQPVKPNIKVIDLIEMLSLIDSGNIEFSKFGFFPNSKSLEFLNKE 290
BLAST of NO15G01080 vs. NCBI_GenBank
Match: XP_005534848.1 (similar to chloroplast inner membrane protein Tic22 [Cyanidioschyzon merolae strain 10D] >BAM80241.1 similar to chloroplast inner membrane protein Tic22 [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 117.1 bits (292), Expect = 1.200e-22 Identity = 69/200 (34.50%), Postives = 104/200 (52.00%), Query Frame = 0 Query: 117 MGTVLQSMVHPPSAEAFSL--KPFSRRSLKEKLASVPCFLVCNQQGSPYLVPLETGFDVGVVFLDPADAEEMLQSMVQN--PQTADARILVMGLDKGLELVQSEPRRNG-------NHMLVFQFCPSVQQLKNANGFRKAGWKAILDQRPDKWRFGFNRQGVRNAGLPVFYCPDLRIAKGREMVKPIFFSMEDLYYAWDR 306 +G LQ ++ P+ A +SR++L EKLA VP F V N+ G P+L +E G VG++F DP DA +ML+ + ++ + DARI +MGLD+ E+V+S+P+ +G +VF+F P+ QQL+ A K + + G+P F L + KG+E V PIF DL AW+R Sbjct: 104 LGAGLQVLLGAPAVSAAKTPHARYSRKTLSEKLAQVPVFAVTNESGQPFLAAMERGLQVGLIFFDPDDAIKMLEDLKRSSGKEAEDARIFIMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQLEYARTVAKKTKQPTV------------------RGVPCFVAKGLTLRKGKEFVIPIFLDKRDLDEAWNR 285
BLAST of NO15G01080 vs. NCBI_GenBank
Match: XP_003239569.1 (translocator of the inner chloroplast membrane [Cryptomonas paramecium] >AEA38671.1 translocator of the inner chloroplast membrane (nucleomorph) [Cryptomonas paramecium]) HSP 1 Score: 104.0 bits (258), Expect = 1.000e-18 Identity = 63/229 (27.51%), Postives = 110/229 (48.03%), Query Frame = 0 Query: 133 FSLKPFSRRSLKEKLASVPCFLVCNQQGSPYLVPLETGFDVGVVFLDPADAEEMLQSMVQNPQTADARILVMGLDKGLELVQSEPRR---NGNHMLVFQFCPSVQQLKNANGF--RKAGWKAILDQRPDKWRFGFNRQGVRNAGLPVFYCPDLRIAKGREMVKPIFFSMEDLYYAWDRSTAGKHGA-APGDVKTLDLLRVVEWMLNEPEQTKLVGFHASTQAQDYVETQ 356 FS FS ++ +KL+ +P F + N G PYL +G++F DA +L +M Q +DARI +MGLD+ +V ++ + N + +F+F P +Q+KNA+ + +K I D +PVF L + KG++ + P+FFS EDL W + + V +DLL++++ M N+ + GF S + ++++ + Sbjct: 81 FSHARFSSKNYYQKLSQIPVFAITNSSGQPYLTTGPEKEQIGLIFFSHEDALALLTAMKNTHQVSDARIYIMGLDRAYRMVTADKTKNQLNQDFKTIFRFYPDQKQVKNASLIVNKLNFYKTIRD-------------------IPVFVADGLVVKKGKDSMTPVFFSKEDLEKTWKKMISENPDINVKPTVLVVDLLKILKAMENDEKIFSKFGFFPSQKNIEFIKKE 290
BLAST of NO15G01080 vs. NCBI_GenBank
Match: XP_005708762.1 (chloroplast inner membrane import protein Tic22 [Galdieria sulphuraria] >EME32242.1 chloroplast inner membrane import protein Tic22 [Galdieria sulphuraria]) HSP 1 Score: 95.9 bits (237), Expect = 2.800e-16 Identity = 77/261 (29.50%), Postives = 118/261 (45.21%), Query Frame = 0 Query: 104 VDLMRAVKDGRQDMGTVLQSMVHPPSAEAFSLKPFSRRSLKEKLASVPCFLVCNQQGSPYLVPLETGFD---VGVVFLDPADAEEMLQSMVQNPQTADARILVMGLDKGLELVQSEPRRNG-------NHMLVFQFCPSVQQLKNANGFRKAGWKAILDQRPDKWRFGFNRQGVRNAGLPVFYCPDLRIAKGREMVKPIFFSMEDLYYAWDR-STAGKHGAAPGDVKTLDLLRVV-EWMLNEPEQTKLVGFHASTQAQDYV 353 V L+ +GT + S P A LK +++LK KL+ VP F V N G PYLV E G D G +F P DA M+ + Q T D +I V+GLDK E+V + P +G M+ F P +Q++ A + +L + K F G+PVF L + KG E P+F +DL AW R + K ++ DL +++ E + E+ + +GF AS ++ +++ Sbjct: 77 VQLLSGQISSPNHLGTQMSSFQTQPVLAA-GLK--VKKNLKSKLSQVPVFAVTNSDGQPYLV--EDGNDKVQKGYIFFSPEDAGRMMTKVKQANGTEDIQIHVIGLDKAYEMVSNPPTSSGLKDEEGRELMMTFLLHPDSEQVQKA--------RELLKREKKKPAFD---------GIPVFVARGLMLRKGDESNVPVFLDKDDLELAWKRLRESDKSLPQHPVIEIADLFQLLKEIEKGDKEELRSLGFFASRKSIEWI 315
BLAST of NO15G01080 vs. NCBI_GenBank
Match: CEL93296.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 95.9 bits (237), Expect = 2.800e-16 Identity = 71/242 (29.34%), Postives = 107/242 (44.21%), Query Frame = 0 Query: 136 KPFSRRSLKEKLASVPCFLVCNQQGSPYLVPLETGFDVGVVFLDPADAEEMLQSMVQNP-QTADARILVMGLDKGLELV-QSEPRRNG-------NHMLVFQFCPSVQQLKNANGFRKAGWKAILDQRPDKWRFGFNRQGVRNAGLPVFYCPDLRIAKGREMVKPIFFSMEDLYYAWDRSTAGKHGAAP-GDVKTLDLLRVVEWMLNEPEQTKLVGFHASTQAQDYVETQLRVKGGKSRPVR 368 K FS R + E+L+SVP FL+ N PYL + G ++F DP +A ML MVQ ADAR+ V+ L+K ++EPRR G ++ F+F P Q++NA + G R +PVF L + K + + P+F +EDL AW+R + P V +LL V+ + G S++A D+V+ K+R +R Sbjct: 66 KKFSSRPMDERLSSVPVFLITNSYALPYLTQVRPGEQTALMFTDPEEANTMLNEMVQTAGPGADARLFVISLEKAWAYARRAEPRRTGIVGEDGKEAVMTFKFHP--PQVENAGNY-------------------VTLLGRRTKMIPVFEATGLDVTKNGDKLCPLFMDLEDLEAAWERMHRARPDTPPKPKVSVYNLLDVLLHRERQANGLGPWGIVPSSKALDFVKKNRSGGTRKARMIR 286
BLAST of NO15G01080 vs. NCBI_GenBank
Match: AFP65238.1 (translocator of the inner chloroplast membrane (nucleomorph) [Chroomonas mesostigmatica CCMP1168]) HSP 1 Score: 91.7 bits (226), Expect = 5.300e-15 Identity = 67/232 (28.88%), Postives = 105/232 (45.26%), Query Frame = 0 Query: 138 FSRRSLKEKLASVPCFLVCNQQGSPYLVPLETGFDVGVVFLDPADAEEMLQSMVQNPQTADARILVMGLDKGLELVQSEPRRNG-------NHMLVFQFCPSVQQLKNANGFRKAGWKAILDQRPDKWRFGFNRQGVRNAGLPVFYCPDLRIAKGREMVKPIFFSMEDLYYAW------DRSTAGKHGAAPGDVKTLDLLRVVEWMLNEPEQTKL-VGFHASTQAQDYVETQ 356 FS + KL S+P F V N+ G+P+L+ + G VG++F +A + + M++ Q I +M L+K ++V P +G +H + FQF P +QL A R A + I ++ P +PVF L + KG+E + PIFF+ EDL W D S K GD L L ++ E Q GF S++ +D+V+ + Sbjct: 97 FSEQPPLAKLKSIPVFSVTNRTGAPFLIQNKKGEQVGLIFFSYREAIDFSKEMLKAHQAKKPYIYIMNLEKAFKMVNLGPTLSGLKDNYGMDHKMRFQFVPEKKQLNYAT--RLAKKRGITEKIP---------------LIPVFTVDGLTLNKGKEKISPIFFAKEDLISVWNKVRKNDPSLHKKPQIIEGDFIQLFLFMKADYKNEENFQKYFNFGFVPSSKNKDFVKIE 311
BLAST of NO15G01080 vs. NCBI_GenBank
Match: XP_005705123.1 (chloroplast inner membrane import protein Tic22 [Galdieria sulphuraria] >EME28603.1 chloroplast inner membrane import protein Tic22 [Galdieria sulphuraria]) HSP 1 Score: 91.7 bits (226), Expect = 5.300e-15 Identity = 70/226 (30.97%), Postives = 104/226 (46.02%), Query Frame = 0 Query: 118 GTVLQSMVHPPSAEAFSLKPFSRRSLKEKLASVPCFLVCNQQGSPYLVP-LETGFDVGVVFLDPADAEEMLQSMVQNPQTADARILVMGLDKGLELVQSEPRRNG-------NHMLVFQFCPSVQQLKNANGFRKAGWKAILDQRPDKWRFGFNRQGVRNAGL---PVFYCPDLRIAKGREMVKPIFFSMEDLYYAWDRSTAGKHGAAP--GDVKTLDLLRVVEWM 331 G+ +++ P A + S K +R LKE+ +V ++V NQ G P+L +E+ VG+ F ADA ML M Q ARI + LDK ++V ++P +G + +VF+FCP V Q++ F RQ +N L PVF PDL + K E + P F EDL +W + H P ++ +DLL V+E M Sbjct: 97 GSNANNVLEPVIASSLS-KRRARELLKERTKNVKVYMVANQAGQPFLAEGVESNTQVGLFFFTAADASMMLMQMSQG-AGGSARIEAISLDKAYDMVTAKPTPSGLKDTKGRDLKVVFRFCPEVYQVR------------------------FYRQLAKNKSLRSVPVFVAPDLVLEKNNENLIPAFLDKEDLEKSW-KELKKTHPELPLRPKIEAVDLLDVLEEM 295 The following BLAST results are available for this feature:
BLAST of NO15G01080 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G01080 ID=NO15G01080|Name=NO15G01080|organism=Nannochloropsis oceanica|type=gene|length=1367bpback to top protein sequence of NO15G01080.1 >NO15G01080.1-protein ID=NO15G01080.1-protein|Name=NO15G01080.1|organism=Nannochloropsis oceanica|type=polypeptide|length=370bpback to top Synonyms
Publications
|