NO15G01040, NO15G01040 (gene) Nannochloropsis oceanica

Overview
NameNO15G01040
Unique NameNO15G01040
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4957
Alignment locationchr15:307391..312347 -

Link to JBrowse

Properties
Property NameValue
DescriptionPhosphoglycerate mutase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:307391..312347 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0016868intramolecular transferase activity, phosphotransferases
GO:0004619phosphoglycerate mutase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006096glycolytic process
GO:0009056catabolic process
GO:0006139nucleobase-containing compound metabolic process
GO:0006091generation of precursor metabolites and energy
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR029033His_PPase_superfam
IPR005952Phosphogly_mut1
IPR013078His_Pase_superF_clade-1
Homology
BLAST of NO15G01040 vs. NCBI_GenBank
Match: EWM22431.1 (phosphoglycerate mutase [Nannochloropsis gaditana])

HSP 1 Score: 521.9 bits (1343), Expect = 1.200e-144
Identity = 253/286 (88.46%), Postives = 267/286 (93.36%), Query Frame = 0
Query:    2 MLARSSLTASKALLRPSTMLMRSASG-SSKVAYRLVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVLEEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKPDVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDARFKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQTK 287
            ML  S + A K LLRPST+L R ASG SSK AYR+VLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLK+AGFTFDKAYTS+LRRAIKTCWLVLEEMDLMWIP +KAW+LNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKN+PHYPGNDVRYG LLQ ETPVTESLKTTLDRVVPFWE VIKPDV AGK L+IAAHGNSLRALVK+LDNIPD+DITELNIPTGTPLVYELD+ FKPIKHK+SIGPLSG YLG+Q AIKARILGVKNQTK
Sbjct:   40 MLISSFMAAPKTLLRPSTILRRHASGNSSKAAYRMVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKEAGFTFDKAYTSVLRRAIKTCWLVLEEMDLMWIPVEKAWQLNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNNPHYPGNDVRYGQLLQRETPVTESLKTTLDRVVPFWEKVIKPDVTAGKGLLIAAHGNSLRALVKKLDNIPDSDITELNIPTGTPLVYELDSEFKPIKHKESIGPLSGRYLGNQEAIKARILGVKNQTK 325          
BLAST of NO15G01040 vs. NCBI_GenBank
Match: ACF24576.1 (phosphoglycerate mutase [Gymnochlora stellata])

HSP 1 Score: 372.1 bits (954), Expect = 1.600e-99
Identity = 174/265 (65.66%), Postives = 206/265 (77.74%), Query Frame = 0
Query:   22 MRSASGSSKVAYRLVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVLEEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKPDVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDARFKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQTK 287
            MRSA   ++  + LVL+RHGES WN EN+FTGW+D++LSEKG  EAKE G+L+ ++   FDKAYTS+L+RAI+T W  LE+ D MWIP QK W LNERHYG L GLDK +TV KHGK+QV IWRRS+DIPPP L++ S HYPGND RY  L ++  P  ESLKTT +RV+P W + I PD+ AGK+LIIAAHGNSLRALVK LDNI D DIT LNIPTG PLVYELD    PI HKD+I PL G+YLGDQ AI+ R+LGVKNQTK
Sbjct:    1 MRSARRGTRSKHTLVLIRHGESVWNLENKFTGWHDIELSEKGHVEAKEAGKLIAESKMKFDKAYTSVLKRAIRTLWHCLEQSDQMWIPVQKEWRLNERHYGGLTGLDKQKTVEKHGKEQVLIWRRSFDIPPPDLDEKSEHYPGNDPRYSHLPKSALPFAESLKTTAERVMPIWADQIVPDIKAGKNLIIAAHGNSLRALVKHLDNISDEDITGLNIPTGVPLVYELDEEMVPIPHKDAIAPLQGYYLGDQEAIRKRVLGVKNQTK 265          
BLAST of NO15G01040 vs. NCBI_GenBank
Match: OQS02668.1 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [Thraustotheca clavata])

HSP 1 Score: 364.0 bits (933), Expect = 4.300e-97
Identity = 170/267 (63.67%), Postives = 209/267 (78.28%), Query Frame = 0
Query:   20 MLMRSASGSSKVAYRLVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVLEEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKPDVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDARFKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQTK 287
            ++ R  S S++  + LVL+RHGESEWNK N+FTGWYDV LS KG  EAK  G L+K+AGFTFD AYTS L+RAI+T W VLEE + M++P    W LNERHYG L GLDKNETV KHGK+QV +WRRSYDIPPP L  ++ +YPG+D RY  L +++ P++ESLK T DRV+P W N I+P + AGK+++IAAHGNSLRALV +LDNI + +ITELNIPTG PL+Y LD   KPI HKD+I PLSG+YLG+Q  I+ARILGVKNQTK
Sbjct:    3 VIRRYVSNSTRQKHTLVLLRHGESEWNKLNKFTGWYDVALSAKGHEEAKAAGTLIKEAGFTFDVAYTSYLKRAIRTLWHVLEESNQMYVPVNTNWRLNERHYGLLTGLDKNETVQKHGKEQVLVWRRSYDIPPPQLTTDNEYYPGHDRRYAHLTKSDLPLSESLKMTADRVMPAWSNEIEPSIRAGKNVVIAAHGNSLRALVMQLDNISEDEITELNIPTGVPLIYHLDENLKPIPHKDAIAPLSGYYLGNQDEIRARILGVKNQTK 269          
BLAST of NO15G01040 vs. NCBI_GenBank
Match: EWM27600.1 (phosphoglycerate mutase [Nannochloropsis gaditana])

HSP 1 Score: 359.8 bits (922), Expect = 8.100e-96
Identity = 172/282 (60.99%), Postives = 210/282 (74.47%), Query Frame = 0
Query:    4 ARSSLTASKALLRPSTMLMRSASGSSKVAYRLVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVLEEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKPDVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDARFKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQT 286
            A  + TA     R ++  +   +G  K  Y++VLVRHGES WN ENRFTGWYD  LS KG+ EA+E G+ LK+A   FD AYTS+LRRAI T W+ LEE+DLMWIP +K W LNERHYGALQGL+K ETV KHG +QV+IWRRSYDIPPPP++K+S HYPGND +Y  + ++  PVTESLKTT  R +P WEN I PD+ AGK ++IAAHGN++RALV+ LDNI +  I  LN+PTG PL+YELD   KPIKH D+I PL GHYLGDQ  I+A+I GV  QT
Sbjct:   37 ASITATARSGSYRTASNTLFMMAGDKK--YKIVLVRHGESTWNDENRFTGWYDCPLSIKGLKEAEEAGKALKEANLRFDMAYTSVLRRAIHTLWMCLEELDLMWIPVKKNWRLNERHYGALQGLNKKETVDKHGIEQVNIWRRSYDIPPPPVDKSSEHYPGNDPKYADVDKSVLPVTESLKTTKARFLPLWENEIIPDIKAGKRIVIAAHGNTIRALVQHLDNISEDVICGLNVPTGVPLIYELDENMKPIKHADAIAPLQGHYLGDQEKIRAKIEGVAAQT 316          
BLAST of NO15G01040 vs. NCBI_GenBank
Match: GAX95139.1 (2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [Pythium insidiosum])

HSP 1 Score: 359.0 bits (920), Expect = 1.400e-95
Identity = 167/254 (65.75%), Postives = 199/254 (78.35%), Query Frame = 0
Query:   33 YRLVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVLEEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKPDVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDARFKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQTK 287
            Y++VL+RHGES+WN +NRFTGW+DV LS  G  E+ + G++LK+ GF FD AYTS+L+RAIKT W +LEEMD MWIP  ++W LNERHYGAL GL+K ETV KHG DQV +WRRSY IPPP L+  S +YPGNDV+Y  + + E P TESLKTT DRVVP+WEN I P + AGK +IIAAHGNSLRALVK LDNI +  IT LNIPTG PLVY+LD  FKPI H D+I PL+G Y+G+Q  IKARI GV NQTK
Sbjct:    5 YQIVLIRHGESQWNVDNRFTGWHDVPLSATGEKESHDAGKVLKEHGFQFDMAYTSVLKRAIKTLWNILEEMDRMWIPVVRSWRLNERHYGALTGLNKQETVDKHGIDQVMVWRRSYAIPPPALDDASAYYPGNDVKYADVDKAELPFTESLKTTGDRVVPYWENTIIPSIKAGKKIIIAAHGNSLRALVKHLDNIAEDKITGLNIPTGVPLVYDLDENFKPIPHPDAIAPLTGRYVGNQEEIKARIAGVANQTK 258          
BLAST of NO15G01040 vs. NCBI_GenBank
Match: ETO65758.1 (hypothetical protein F444_16967 [Phytophthora parasitica P1976])

HSP 1 Score: 356.7 bits (914), Expect = 6.800e-95
Identity = 164/254 (64.57%), Postives = 199/254 (78.35%), Query Frame = 0
Query:   33 YRLVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVLEEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKPDVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDARFKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQTK 287
            Y++VL+RHGES+WN +NRFTGW+DVQLS KG  E+ + G++LK+AGF FD AYTS+L+RAIKT W +LEE DLMWIP  ++W LNERHYGAL GL+K ETV KHG ++V IWRRSY  PPP LE +S +YPGND RY  + +   P  ESL TT +RV+P+WE  I P +  GK ++IAAHGNSLRALVK LDNIP+  IT LNIPTG PLVY+LD  FKP+ HKD+I PLSG+Y+GDQ  IKARI GV NQTK
Sbjct:    5 YQIVLIRHGESQWNVDNRFTGWHDVQLSAKGEHESHDAGKVLKEAGFKFDLAYTSVLKRAIKTLWNILEETDLMWIPVIRSWRLNERHYGALTGLNKQETVDKHGIEKVMIWRRSYATPPPSLEADSEYYPGNDPRYADVPKELLPFAESLATTGERVLPYWEQTIIPSIKEGKKIVIAAHGNSLRALVKHLDNIPEDTITGLNIPTGVPLVYDLDENFKPVPHKDAIAPLSGYYVGDQEEIKARIAGVANQTK 258          
BLAST of NO15G01040 vs. NCBI_GenBank
Match: CBN79496.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 355.9 bits (912), Expect = 1.200e-94
Identity = 175/286 (61.19%), Postives = 209/286 (73.08%), Query Frame = 0
Query:    2 MLARSSLTASKALLRPSTMLMRSAS-GSSKVAYRLVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVLEEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKPDVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDARFKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQTK 287
            ML+  + T S+   R       +AS G +   + +VL+RHGES+WN ENRFTGWY++QLS KG  EA EGGRL+ +AG+TFD AYTS L+RAIKTCW  LE+  LM IP   AW+LNERHYG L GLDK ETV KHG DQV +WRRSYDI PPP++K S  YPGND  Y +L   E PVTESL TTL RV+P+WE VI P++ +GK+++IAAHGNSLRALVK LD+IP+  +T LNIPTG PLVYELD   K I HKD+I PL G YLGD   +KARI GV  QTK
Sbjct:    1 MLSTLARTTSRLAARQGRRHAITASIGGANQKHTVVLIRHGESQWNLENRFTGWYNIQLSSKGEIEAAEGGRLIHEAGYTFDIAYTSFLKRAIKTCWHTLEQTGLMHIPIVNAWQLNERHYGGLTGLDKQETVEKHGIDQVMVWRRSYDILPPPVDKKSEFYPGNDPMYKSLSPEELPVTESLATTLKRVLPYWEKVISPEIESGKNVLIAAHGNSLRALVKHLDDIPEDVLTGLNIPTGVPLVYELDDNMKVIPHKDAIAPLQGRYLGDLEKVKARIAGVAKQTK 286          
BLAST of NO15G01040 vs. NCBI_GenBank
Match: ETI37027.1 (hypothetical protein F443_16944, partial [Phytophthora parasitica P1569] >ETM37104.1 hypothetical protein L914_16306, partial [Phytophthora parasitica] >ETP34956.1 hypothetical protein F442_16787, partial [Phytophthora parasitica P10297])

HSP 1 Score: 355.5 bits (911), Expect = 1.500e-94
Identity = 163/254 (64.17%), Postives = 199/254 (78.35%), Query Frame = 0
Query:   33 YRLVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVLEEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKPDVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDARFKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQTK 287
            Y++VL+RHGES+WN +NRFTGW+DVQLS KG  E+ + G++LK+AGF FD AYTS+L+RAIKT W +LEE DLMWIP  ++W LNERHYGAL GL+K ETV KHG ++V IWRRSY  PPP LE +S +YPGND +Y  + +   P  ESL TT +RV+P+WE  I P +  GK ++IAAHGNSLRALVK LDNIP+  IT LNIPTG PLVY+LD  FKP+ HKD+I PLSG+Y+GDQ  IKARI GV NQTK
Sbjct:   19 YQIVLIRHGESQWNVDNRFTGWHDVQLSAKGEHESHDAGKVLKEAGFKFDLAYTSVLKRAIKTLWNILEETDLMWIPVIRSWRLNERHYGALTGLNKQETVDKHGIEKVMIWRRSYATPPPSLEADSEYYPGNDPKYADVPKELLPFAESLATTGERVLPYWEQTIIPSIKEGKKIVIAAHGNSLRALVKHLDNIPEDTITGLNIPTGVPLVYDLDENFKPVPHKDAIAPLSGYYVGDQEEIKARIAGVANQTK 272          
BLAST of NO15G01040 vs. NCBI_GenBank
Match: XP_008912226.1 (hypothetical protein PPTG_16444 [Phytophthora parasitica INRA-310] >ETK77252.1 hypothetical protein L915_16474 [Phytophthora parasitica] >ETL30688.1 hypothetical protein L916_16373 [Phytophthora parasitica] >ETN02492.1 hypothetical protein PPTG_16444 [Phytophthora parasitica INRA-310] >ETP06868.1 hypothetical protein F441_16794 [Phytophthora parasitica CJ01A1] >KUF81032.1 Cell 12A endoglucanase [Phytophthora nicotianae] >KUF85981.1 hypothetical protein AM587_10005916 [Phytophthora nicotianae] >KUF94264.1 Phosphatidate cytidylyltransferase [Phytophthora nicotianae])

HSP 1 Score: 355.5 bits (911), Expect = 1.500e-94
Identity = 163/254 (64.17%), Postives = 199/254 (78.35%), Query Frame = 0
Query:   33 YRLVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVLEEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKPDVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDARFKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQTK 287
            Y++VL+RHGES+WN +NRFTGW+DVQLS KG  E+ + G++LK+AGF FD AYTS+L+RAIKT W +LEE DLMWIP  ++W LNERHYGAL GL+K ETV KHG ++V IWRRSY  PPP LE +S +YPGND +Y  + +   P  ESL TT +RV+P+WE  I P +  GK ++IAAHGNSLRALVK LDNIP+  IT LNIPTG PLVY+LD  FKP+ HKD+I PLSG+Y+GDQ  IKARI GV NQTK
Sbjct:    5 YQIVLIRHGESQWNVDNRFTGWHDVQLSAKGEHESHDAGKVLKEAGFKFDLAYTSVLKRAIKTLWNILEETDLMWIPVIRSWRLNERHYGALTGLNKQETVDKHGIEKVMIWRRSYATPPPSLEADSEYYPGNDPKYADVPKELLPFAESLATTGERVLPYWEQTIIPSIKEGKKIVIAAHGNSLRALVKHLDNIPEDTITGLNIPTGVPLVYDLDENFKPVPHKDAIAPLSGYYVGDQEEIKARIAGVANQTK 258          
BLAST of NO15G01040 vs. NCBI_GenBank
Match: ETL83920.1 (hypothetical protein L917_16197 [Phytophthora parasitica])

HSP 1 Score: 355.1 bits (910), Expect = 2.000e-94
Identity = 162/254 (63.78%), Postives = 199/254 (78.35%), Query Frame = 0
Query:   33 YRLVLVRHGESEWNKENRFTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVLEEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDIPPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKPDVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDARFKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQTK 287
            Y++VL+RHGES+WN +NRFTGW+DVQLS KG  E+ + G++LK+AGF FD AYTS+L+RAIKT W +LEE DLMWIP  ++W LNERHYGAL GL+K ETV KHG ++V +WRRSY  PPP LE +S +YPGND +Y  + +   P  ESL TT +RV+P+WE  I P +  GK ++IAAHGNSLRALVK LDNIP+  IT LNIPTG PLVY+LD  FKP+ HKD+I PLSG+Y+GDQ  IKARI GV NQTK
Sbjct:    5 YQIVLIRHGESQWNVDNRFTGWHDVQLSAKGEHESHDAGKVLKEAGFKFDLAYTSVLKRAIKTLWNILEETDLMWIPVIRSWRLNERHYGALTGLNKQETVDKHGIEKVMVWRRSYATPPPSLEADSEYYPGNDPKYADVPKELLPFAESLATTGERVLPYWEQTIIPSIKEGKKIVIAAHGNSLRALVKHLDNIPEDTITGLNIPTGVPLVYDLDENFKPVPHKDAIAPLSGYYVGDQEEIKARIAGVANQTK 258          
The following BLAST results are available for this feature:
BLAST of NO15G01040 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM22431.11.200e-14488.46phosphoglycerate mutase [Nannochloropsis gaditana][more]
ACF24576.11.600e-9965.66phosphoglycerate mutase [Gymnochlora stellata][more]
OQS02668.14.300e-9763.672,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
EWM27600.18.100e-9660.99phosphoglycerate mutase [Nannochloropsis gaditana][more]
GAX95139.11.400e-9565.752,3-bisphosphoglycerate-dependent phosphoglycerate... [more]
ETO65758.16.800e-9564.57hypothetical protein F444_16967 [Phytophthora para... [more]
CBN79496.11.200e-9461.19conserved unknown protein [Ectocarpus siliculosus][more]
ETI37027.11.500e-9464.17hypothetical protein F443_16944, partial [Phytopht... [more]
XP_008912226.11.500e-9464.17hypothetical protein PPTG_16444 [Phytophthora para... [more]
ETL83920.12.000e-9463.78hypothetical protein L917_16197 [Phytophthora para... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL148nonsL148Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001502NSK001502Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G01040.1NO15G01040.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|625370gene_4647Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100011g26gene7956Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G01040.1NO15G01040.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G01040 ID=NO15G01040|Name=NO15G01040|organism=Nannochloropsis oceanica|type=gene|length=4957bp
TGCGAGAAGACAGAGCAAGGTGAAAGTTGTGCTCGTCACTTCTTTCCGAG
ACAGTCGTTACTACACAAAACGCGCTCTACAGACGGGCTGGCAGATCTAT
GTGTTTGCTTTGCCAGCCGACGGACCAACTATAGTATCTTTCTTCGTCCT
CTACTCATTTTTGTCAAAGATTTTTTACACTCGTCGCATTTTCTTTCTTT
GGTGGTCCTACTAATGCGCGTCGTTCGCTCCCTGATGAGTGCTTTCGATA
AAATCAGGAAAACGATTGGGCCAAAACAGCATGCCCTGGGCGCTCTCGTC
CCTACAGAGCTGCCCCCTCGCCTCCGCCGCTCGCAGAAACTCCTGCGCCA
AGGTGAGGGACACCTGCAAGTGGGTGGCCACGTCCAATGCCGTCAATGAA
CCGTCCGCCTCCGCCTCAGCTAGAGCCCGCAATTGTCCACTCACTTGTTG
CTCGCTAAACTCCTGGGCTTGCACGACACTCACGCCACTGGGAAAGCGGT
GCAAGCGCATGCCAAGCTGGAGTGACTCCAATTCCTCGCATGCATCCAGG
AGATCCTCGGGCGATATAAGAGCCGTGCCACGGGCCCGGTTGAAGAGGCA
GTATGTGTCATGCAATGTCATCATCCCGCCCCGTGCCGCAAGCATGCCCC
CGGTCGCCCTAGTGCTCTTCCCGCCGCCCGTGAGAAACTGTGCCAGCTGT
CGGGCTAGTTCTTTGTGGTAGAGTGAGCCCGCCGAAACACGCGTCACAGG
ATTGAAAATGCCCATGTCGATAAGCAAGCCCTGCAGCTCAGCGTCCTCCT
GCCCCCCACCATTACCGCTGCCTGCTCCCTCGCCCTCGGCCTTGGAGGCC
AGAACCGTGGCGTAGCGCTCGATTACGCTCACCACTTCACGAGCCCTGCC
CATTAGTGCCTGCAGATCTCCAAAAGCCTCGGTTGCTAGTTTGTCTTGCG
CGGCCCTGGTGTTTTCTTGCCGTCGTATGATTCCTCCCACCCCGGCCTTG
CGCGCAGTAAAAACAGGCACGGCGGAAGCGGTGGCGGCGGCGACAGCGGG
GGATCTTCCGGAACCTGAAGTGGGTGATGACGCCGGCACTTTTTCCCAGT
CCCGCATTTGCAATAGGGTCTTGACTTGCGCCAAAAACTCGTCGCGCCCG
CCGTGGACGAAATCGATCTTGGTGGCAGGTTTGTCCCTGTGCTGATCAGG
ACCTTGTAGATAGAGATGGACCCGCGAAGAGGGCTTGAAGATGTTGTGCG
ACTTTCGAGCGTCTACGACCTTGGACAAATGGCCGTGGTATGCACGGGAC
TGGGTTTGGCAGTGCCAGATGATGCGGTGGGAGGTCAGGATCACCAACCC
GCCCGTGTGCACCACTTGGTTGCTCCGGCCGTCAATTAGGGCCACCTTGT
CTCGCAGTAAGCATTCCACTTCGTACTCGGAGAGCGGCGGCCGCGTGGTT
CCTGGGAGCAAAGGCAGCTCCTGCCAGAAGCGCTGGAAGGGGTCGAGCAT
GGCCTCGTTGTGGGGCTGTGATGGAAGTGTCTCGACTGCAGGGAAGGGAC
AAACAGCAGGCAGGCCGTCACGAATGGTGAGCGAAGGGAAGTCAACCAAA
TGGGCTGCCTTAGTAATGTGGGCAAGAGTTTAGACCAGGCTGTGAAACCA
GGCGACGCTGCAGGTAAAAGCGAGTATCGCCGGAGACCTCGACGCGGCAA
GGTCATGGCAGCGTTCTCATCATCCCTTGGGCCAAGCCATTTCCCCGCTC
CCTCCGATCCCCTTCCTCTATCACCTCGCCACCCAGGAGGTACGACGTTG
GCAAGTTTGGTCGTAAACATCTTGTGAGCAAGACTGTCAGCTCTCTGTAC
ATTCAGTACAACGTTTTTGGCCTTATTTTCTTGGTTATCAGGTCTGTCCC
CCGTTCATACGACACAGATCAATCATGATGCTAGCCAGATCTTCCCTGAC
GGCCTCCAAGGCCCTTCTCCGCCCGTCCACGATGCTGATGCGCTCTGCCA
GCGGCAGTTCCAAAGTGGCGTACCGCCTCGTCTTGGTTAGgtgcgtatgg
tttgtatgaaggcacctttgtgtggggtgttggttgctttgttatgttgg
cgagcgatgtcgtgggagtcccaatgcgctcctttgatctctcattccca
acccacactgtgtatgacacagGCATGGAGAGAGTGAGTGGAACAAGGAG
AACCGCTTCACGGGCTGGTACGATGTGCAACTGTCGGAGAAAGGCATTGC
TGAGGCGAAGGAGGGCGGGCGGCTGCTGAAGGATGCGGGCTTTACGTTTG
ACAAAGCCTACACATCTTTGCTGCGTCGGGCCATCAAGACCTGCTGGCTG
GTGCTGGAGGAAATGGACCTGATGTGGATCCCTACGCAGAAGGCATGGGA
ACTGAACGAGCGGCATTATGGGGCATTGCAAGGCTTGGACAAGAATGAGA
CGGTGGCAAAGCACGGCAAGGACCAGGTGCACATCTGGCGCCGCTCCTAT
GACATCCCCCCTCCTCCTCTGGAGAAAAACAGCCCCCATTATCCCGGTAA
CGATGTTCGATACGGCACGCTGCTGCAAAACGAGACGCCCGTAACGGAGA
GTTTGAAGACGACCTTGGACAGGGTGGTGCCTTTCTGGGAGAATGTGATA
AAGCCAGACGTGGCGGCCGGCAAGAGCCTTATCATCGCAGCGCACGGCAA
CTCTTTGCGGGCCCTGGTCAAGGAGCTGGATAACATTCCCGACGCGGATA
TCACGGAGTTAAATATACCCACGGGCACGCCGTTGGTGTACGAGTTGGAC
GCCCGCTTCAAGCCTATCAAGCACAAGGACAGCATCGGGCCTCTGTCAGG
TCATTATTTGGGGGACCAGGCTGCCATCAAGGCTCGTATTTTGGGAGTAA
AGAATCAGACCAAGTAAGGAGTGAAGGATGGTTAGGTGTCGTCTTTATAT
TGTACGTGTCCTGTGATGTGGGGGAGTGTGGTCTGTGTGCTGTTTGTTGC
TGCTATCGAGTTGAAAGGACTGCTGCGGAAACGCCGCCTTAGCGTAGGAC
AGAGAGGCTCTCAAAAGCATGGTTGCTGATAAGTGTTGGTCATAGTCTAT
AGAGATGGAAATGAGGGAGCCGGACAAGAGTCACGAGGTGGTGAGAAAAG
TGAAGTGTTGAAACAAGCAAGTGCGAGCGAGTGCTTTCTCTCACTTTATT
GCTTTTTGTTTGTGTGCGACTGCACGCACGCACCGTAGCTAATGCATTCT
GATTAAACTTCTGATCTTGTCATACTTTCCTCGTTCCACCCACTTCAGGG
CATGTTTGCATGGCTCCAACCCATCTTTCCTTATTTCGGATACATCTTTT
CTCTGCGCCCTAGTTGATGGCGCAAGGCACAAGCGAAGACACTCAATCCA
ATCAAAATTATCATCGCTTATGTATGGCATCAAGAAAGCGAATAATAGCT
AAAACACTCACATCTATCTACCCCTTCTTCCCCACTCGCATCCTCCATCC
CGCCCTCTAGATACATACAGTAACACACCCTCCCGACATCATACAAATTT
AAGAGCCCTTAGTAGCCAACGCCAAACCAACCCGCTTATTCTTATAATCA
TAGGCCGAGTAATACTTTCGCAAAAATACATCCCCCAGTATCCACTGAGC
GCTCATGTGCTCGTCGCCCTGCAGCCCCAATAGGCACAAAGGCCCATCCT
CTATCACGTAATCGTCCGCATTTAAAGCATAGGGCTGCCCATCGACCACA
AACTCTATTGTCGGCATCGTTTTCCTCTTTCCACAATCCACCGTATAAAT
TCGATTCGTGGCCGTTGCCCCGAGTCCCTCGGCTATGGCATCCACGTCCC
GCTTCGGCCCAATAATAAGGGATGCGCCCGAGTCCATCACTGCCAGGTGT
GCCTTGCTCTGAGAATCCTGTGCTCCCAGATGCACCCTATCCAACCCAAC
AGCCCAGTACCCCGGCGGTTCCTCTAAGGGCACCCAATGCAATTGTCCTA
AGTAATGACTTGGGTCGGTGCCGCCCACCGTCAGCTCGCCCAGCCCCGCT
CCCTCCCCTCCCAAATAAAAAGCAAACACCGGCTCGGGCAGCGCCTTGCC
CTGCTGCTGGATCAAATTATGAAAAGGTGTTATAGTATTGGCCACTGAAA
TCTCGTCAAATCCCAATCCCAAAACGCCGTCGTATCCCCCTCCCAAGTAG
CTAGTCCCCAGGCCCAAGGGGTTGGTGATCTGGGCAAACGTCTGATTCCT
TACGGCATAACCACCTAAGGTGACCGTGTCCTCAGCCAGGTAGCCGGAGA
CAGGGCCTCCCATGTATGTGATCTCAAAGCGACCCCCATCCCTCTTGAAG
GTCGATGAGGAGTCTGAATTATACTTATTGCGGTGGCCACATACTTTGCA
CAGGGCCGAGGGCACCCACAGGTCGCTGCTGCCCGTATCGAAGATGACGG
TGAACTCACGGGGGGGGTCCCAATACCAATCACACCTGTGTAGGCTACAT
CCTGGTAGACATCTCTCAAGATGATCTCCCCCTTTTCTGCCAGGCCACGT
TGCCGGTGATGGACACCGCGGGGAGGCAGAGCCACCTTGGCCAGGGGGAT
GCGCATTAGGGTTGGCTCAAGGGTGGGAGGAGAATCTCTCTCGGCCATCG
CAATGGCAGTGGCCCCTATAGATGATGTGATTGTCGCCAGGAGCAGCAAA
AGCTGCTTGTTACGACCCTCCTGCATCGGTTGTGCCTGTGTGGCAAGTGA
TGCAACAGAGGGGAGGTTGATGAGTGTGAATTACCATGAGTAACCGAATC
TCCAATGCGGACAGAAATTTTCGTATGAGAAAAAGAAATGAACAAAGTCG
TACAACAATGACCCACAGCCATGACAACTGGGCGACAAAATGCGAGACAA
TGCGAAGAAGGAAGTCCATCACGTTCCGGCTCGCACGCAGGTATGATACA
ATATTTC
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protein sequence of NO15G01040.1

>NO15G01040.1-protein ID=NO15G01040.1-protein|Name=NO15G01040.1|organism=Nannochloropsis oceanica|type=polypeptide|length=287bp
MMLARSSLTASKALLRPSTMLMRSASGSSKVAYRLVLVRHGESEWNKENR
FTGWYDVQLSEKGIAEAKEGGRLLKDAGFTFDKAYTSLLRRAIKTCWLVL
EEMDLMWIPTQKAWELNERHYGALQGLDKNETVAKHGKDQVHIWRRSYDI
PPPPLEKNSPHYPGNDVRYGTLLQNETPVTESLKTTLDRVVPFWENVIKP
DVAAGKSLIIAAHGNSLRALVKELDNIPDADITELNIPTGTPLVYELDAR
FKPIKHKDSIGPLSGHYLGDQAAIKARILGVKNQTK*
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Synonyms
Publications