NO15G00960, NO15G00960 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00960 vs. NCBI_GenBank
Match: EWM22485.1 (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 421.8 bits (1083), Expect = 6.200e-114 Identity = 376/1048 (35.88%), Postives = 441/1048 (42.08%), Query Frame = 0
Query: 1 MFDIELSL--TGSSSHTIILRRDYQEFRVLHLALTNLLTSSKKDVTLPTLPQYSEGSTDSQMAESLTTYLYELMALPDVTASHQFLSLLNDHDGAGGAESSGMVPENAVDFLLQPCSFTSLYVPRRAKHEEEVEVPAGSTVLWRFFVADDLDIQFKATFRPHPSAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEGRFPPCEHATAPPSPTKPGXXXXXPDYVQGSYTSLPTSHGGICSLSWDNGYSRLRGKQLQYVLQVVXXXXXXXXXXXXXXXXXXXXXTRNLITSRIQTGEGEKEKSVIVTVTPVARPTIDSAESFSSPWREEGGGRGRCEIEETKERIVAGGRGGLDILSASSTSSLSDLDQALEAAGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSSLGVMWDYLYSSKEDGKGEEAGAVGQQQQQQHIPQADFERVVGLMERLEDELAHMTAKKEQAEAEAVIALAKQRRWSIEKEKFERKMHEALAKVEAAGEQIKAMQGEKAGLEVVLGAKQQEVEGAMEAAKRAERERDVLKAEKHVWTVAHSGVQAELTSLSGALEKERQAHEDTRAAWKKAKEAAHRVKSEVETLKTRLEVKVDERALQITQEELGSARAEIRDLSEALEETAAENDTLRGQIKLLAKHVKKQKQDMALSQADLSQARMQVAIQEKKLGQLKAEKKLLVKEIKARASVSGVA----DAAAALKATSPS----------SGHIPMVTSSLPSSVSEVLGEDMSGVEGGQDGIRIGEAQAVGLDLERQPASE--SLAAGERXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKEGNTXXXXXXXXXXXXXXXXXXXXXXXXXXPVDSSPSPLAVVEPTPTSXXXXXXXXXXXXXXXXXXXXXXXXXKPTAATPPPRTKVPLA---AXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSSVLDKDERYHRLLSQLRNVTERRKQLLLLCEEDPHNENVKQLVSDLEGVLGNLKIKMRAMVEAAGESGGQRR 1028
MFD+EL+L GS SHTIILRRDYQEFR LHLAL NL+TSSKKDVTLP LPQY EGSTD+QMAE+LTTYLY+LMA+PDVTAS QFLSLLNDHDGAGGAE+SG+ PE+AVDFLLQPC+ TSLYVPRRAKHEE+VEV AGSTVLWRF V D LDI FK TFRPH A ++EGRFP + +A P+P P + VQG Y+ S GG+CS WDN YSRLRGKQ ++GG G +G GA F RVVGL+E LEDE+A M AKKEQAEAEAVIALAKQRRWSIEKEKFER+M EALA+ E GEQ+KA++ EKAGLE +G K++E EA KRAERER+VL AEK VWT+AHSGVQAELTSL+G LE+E R +LLVKEIKAR+ + A +AAA L ++ S +G + VT SL + G + G +DG +G A + + E G+ XXXXXXXXXXXXX V E P+ S +P A +PT +A PP P +SS LDKDERY RL+SQLRNVTERRKQLLLLCEEDP NEN+KQ+V+DLEGVL N+K +MR ++EAAGESG QRR
Sbjct: 1 MFDVELALAEAGSKSHTIILRRDYQEFRALHLALDNLITSSKKDVTLPALPQYMEGSTDAQMAEALTTYLYDLMAIPDVTASRQFLSLLNDHDGAGGAETSGLAPESAVDFLLQPCAPTSLYVPRRAKHEEDVEVSAGSTVLWRFSVGDGLDISFKGTFRPHAGTA-----------------DTSPTEDLTPLPVEIVVEGRFP--QAGSAVPAPLSPDAEAGRAEDVQGCYSVPAESLGGVCSFCWDNSYSRLRGKQ------------------------------------------------------------------------QQGGWEG--------------------------------------------------------------------------------------------------------------PRRGRRGGAARXXXXXXXXXXXXFSRVVGLVEELEDEVAQMAAKKEQAEAEAVIALAKQRRWSIEKEKFERRMLEALARGETLGEQVKALRAEKAGLEAEVGRKEEEAVALREARKRAEREREVLAAEKQVWTLAHSGVQAELTSLTGTLERE-------RXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLLVKEIKARSGSAPFAELKPEAAAVLDCSTTSGTLLEESVGEAGGLEGVTGSLEEEPRKG-GGLVEGEGSARDGELLGSALPLASSMTEALNDEGGDRVRGKEEAGAGXXXXXXXXXXXXXTEGRKGEENEVSEHEGRQHEEMTEGRGGQPARSLSLTTLSPCPLPSGQAPAA----SPTD----------------------ALSSSDSAPPPKPCSSPTKEQNESFPILKSVGHSATILCSPERSNRKKESSASSTLDKDERYTRLISQLRNVTERRKQLLLLCEEDPQNENIKQMVADLEGVLANIKTRMRVILEAAGESGSQRR 813
BLAST of NO15G00960 vs. NCBI_GenBank
Match: XP_005852472.1 (hypothetical protein NGA_2062200, partial [Nannochloropsis gaditana CCMP526] >EKU23360.1 hypothetical protein NGA_2062200, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 136.0 bits (341), Expect = 6.800e-28 Identity = 63/79 (79.75%), Postives = 68/79 (86.08%), Query Frame = 0
Query: 86 LLNDHDGAGGAESSGMVPENAVDFLLQPCSFTSLYVPRRAKHEEEVEVPAGSTVLWRFFVADDLDIQFKATFRPHPSAA 165
LLNDHDGAGGAE+SG+ PE+AVDFLLQPC+ TSLYVPRRAKHEE+VEV AGSTVLWRF V D LDI FK TFRPH A
Sbjct: 1 LLNDHDGAGGAETSGLAPESAVDFLLQPCAPTSLYVPRRAKHEEDVEVSAGSTVLWRFSVGDGLDISFKGTFRPHAGTA 79
BLAST of NO15G00960 vs. NCBI_GenBank
Match: CBN75833.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 87.8 bits (216), Expect = 2.100e-13 Identity = 41/79 (51.90%), Postives = 53/79 (67.09%), Query Frame = 0
Query: 91 DGAGGAESSG----MVPENAVDFLLQPCSFTSLYVPRRAKHEEEVEVPAGSTVLWRFFVADDLDIQFKATFRPHPSAAT 166
DG+ GA S+G PE A+DFLLQP + YVPRRA+H E ++V G +V+W+F V D LDI F TFRPHP A++
Sbjct: 136 DGSAGACSTGEEARKSPETAIDFLLQPFEYGRAYVPRRAEHTESIDVLRGESVVWKFEVLDHLDIDFSVTFRPHPLASS 214
BLAST of NO15G00960 vs. NCBI_GenBank
Match: XP_008868634.1 (hypothetical protein H310_05646 [Aphanomyces invadans] >ETW03250.1 hypothetical protein H310_05646 [Aphanomyces invadans]) HSP 1 Score: 72.0 bits (175), Expect = 1.200e-8 Identity = 70/261 (26.82%), Postives = 108/261 (41.38%), Query Frame = 0
Query: 7 SLTGSSSHTIILRRDYQEFRVLHLALTNLLTSSKKDVTLPTLPQYSEGSTDSQMAESLTTYLYELMALPDVTASHQFLSLLNDHDGAGGAESSGMVPENAVDFLLQPCSFTSLYVPRRAKHEEEVEV-PAGSTVLWRFFVADDLDIQFKATFR-PHPSAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEGRFPPCEHATAPPSPTKPGXXXXXPDYVQGSYTSLPTSHGGICSLSWDNGYSRLRGKQLQYVLQVV 266
SLT S + + R Y LH+ L + +P+ P + +TD+++A L L V S + SL+++ AG A + A+DF+LQP + + + R +KHE ++++ AG +++W+F V +D DI+F A F P P AT + +KP V+G YT S G+ +L WDN YSRLR K L Y+ VV
Sbjct: 19 SLT-DQSQVVCIDRPYSALEKLHI----FLVKKHGAINIPSFPLFPSNATDAKLA-VLCAELTAYFKCDKVYESDEVRSLVDEEITAGAAHMT------AIDFILQPFEYEKVNILRGSKHELQLQMTSAGQSLVWKFEV-EDYDIEFYAEFHTPFPMYTEIF--------------------------------------HAATKYQTTSKP---------VEGMYT---CSRPGVVTLRWDNTYSRLRNKSLLYLAHVV 216
BLAST of NO15G00960 vs. NCBI_GenBank
Match: XP_009835962.1 (hypothetical protein H257_10912 [Aphanomyces astaci] >ETV74875.1 hypothetical protein H257_10912 [Aphanomyces astaci]) HSP 1 Score: 71.2 bits (173), Expect = 2.100e-8 Identity = 68/262 (25.95%), Postives = 106/262 (40.46%), Query Frame = 0
Query: 6 LSLTGSSSHTIILRRDYQEFRVLHLALTNLLTSSKKDVTLPTLPQYSEGSTDSQMAESLTTYLYELMALPDVTASHQFLSLLNDHDGAGGAESSGMVPENAVDFLLQPCSFTSLYVPRRAKHEEEVEV-PAGSTVLWRFFVADDLDIQFKATFR-PHPSAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEGRFPPCEHATAPPSPTKPGXXXXXPDYVQGSYTSLPTSHGGICSLSWDNGYSRLRGKQLQYVLQVV 266
+S S + + R Y LH L + +P+ P + +TD+++A L L V S + +L+N+ AG A + A+DF+LQP + + + R +KHE +++V AG T++W+F V DD DI+F A F P P AT + +KP V+G YT + G+ +L WDN YSRLR K + Y+ V+
Sbjct: 17 VSSLSDQSQVVCVERSYVALEKLHA----FLIKKHGTLNIPSFPVFPSPATDAKLA-VLCAELTVYFKCGAVHESDEVHALVNEERAAGVAHMT------AIDFILQPFEYEKVNILRGSKHELQLQVASAGQTLVWKFEV-DDYDIEFYAEFHTPFPMYTEIF--------------------------------------HAATKYQTTSKP---------VEGMYT---CTRPGVVTLRWDNAYSRLRNKTVLYLAHVI 216
BLAST of NO15G00960 vs. NCBI_GenBank
Match: XP_009835963.1 (hypothetical protein, variant [Aphanomyces astaci] >ETV74876.1 hypothetical protein, variant [Aphanomyces astaci]) HSP 1 Score: 71.2 bits (173), Expect = 2.100e-8 Identity = 68/262 (25.95%), Postives = 106/262 (40.46%), Query Frame = 0
Query: 6 LSLTGSSSHTIILRRDYQEFRVLHLALTNLLTSSKKDVTLPTLPQYSEGSTDSQMAESLTTYLYELMALPDVTASHQFLSLLNDHDGAGGAESSGMVPENAVDFLLQPCSFTSLYVPRRAKHEEEVEV-PAGSTVLWRFFVADDLDIQFKATFR-PHPSAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEGRFPPCEHATAPPSPTKPGXXXXXPDYVQGSYTSLPTSHGGICSLSWDNGYSRLRGKQLQYVLQVV 266
+S S + + R Y LH L + +P+ P + +TD+++A L L V S + +L+N+ AG A + A+DF+LQP + + + R +KHE +++V AG T++W+F V DD DI+F A F P P AT + +KP V+G YT + G+ +L WDN YSRLR K + Y+ V+
Sbjct: 17 VSSLSDQSQVVCVERSYVALEKLHA----FLIKKHGTLNIPSFPVFPSPATDAKLA-VLCAELTVYFKCGAVHESDEVHALVNEERAAGVAHMT------AIDFILQPFEYEKVNILRGSKHELQLQVASAGQTLVWKFEV-DDYDIEFYAEFHTPFPMYTEIF--------------------------------------HAATKYQTTSKP---------VEGMYT---CTRPGVVTLRWDNAYSRLRNKTVLYLAHVI 216
BLAST of NO15G00960 vs. NCBI_GenBank
Match: XP_008620848.1 (hypothetical protein SDRG_16417 [Saprolegnia diclina VS20] >EQC25715.1 hypothetical protein SDRG_16417 [Saprolegnia diclina VS20]) HSP 1 Score: 68.9 bits (167), Expect = 1.000e-7 Identity = 71/265 (26.79%), Postives = 108/265 (40.75%), Query Frame = 0
Query: 4 IELSLTGSSSHTIILRRDYQEFRVLHLALTNLLTSSKKDVTLPTLPQYSEGSTDSQMAESLTTYLYELMALPDVTASHQFLSLLNDHDGAGGAESSGMVPENAVDFLLQPCSFTSLYVPRRAKHEEEVEVPAGSTVL-WRFFVADDLDIQFKATFR-PHPSAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEGRFPPCEHATAPPSPT-KPGXXXXXPDYVQGSYTSLPTSHGGICSLSWDNGYSRLRGKQLQYVLQVV 266
+++ ++ + + + R + LH +L S +P+ P + TD+ + L L A V A+ + +LL D G ++G + A+DFLLQP + + +PR +KH+ +++V S VL W+F V +D DI F A F P P + HAT T KP V+G Y G+ +LSWDN YSRLRGK + YV VV
Sbjct: 13 VQMVVSDADDQVVCVERSFAALEGLHASLVAAACDS-----IPSFPLFPGVPTDAALTH-LCAELNAYFAHASVKATAELHALLADDLG----NNTGHM--TAIDFLLQPFEYEKVVIPRGSKHDVQLQVTNSSQVLVWKFEV-EDFDIDFNADFHVPTP---------------------------------------MYTEVFHATTRYQTTVKP---------VEGMYR---CPKPGVLTLSWDNTYSRLRGKTVHYVAHVV 213
BLAST of NO15G00960 vs. NCBI_GenBank
Match: XP_012197368.1 (hypothetical protein SPRG_03404 [Saprolegnia parasitica CBS 223.65] >KDO32187.1 hypothetical protein SPRG_03404 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 67.8 bits (164), Expect = 2.300e-7 Identity = 79/322 (24.53%), Postives = 122/322 (37.89%), Query Frame = 0
Query: 4 IELSLTGSSSHTIILRRDYQEFRVLHLALTNLLTSSKKDVTLPTLPQYSEGSTDSQMAESLTTYLYELMALPDVTASHQFLSLLNDHDGAGGAESSGMVPENAVDFLLQPCSFTSLYVPRRAKHEEEVEVPAGSTVL-WRFFVADDLDIQFKATFR-PHPSAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEGRFPPCEHATAPPSPT-KPGXXXXXPDYVQGSYTSLPTSHGGICSLSWDNGYSRLRGKQLQYVLQVVXXXXXXXXXXXXXXXXXXXXXTRNLITSRIQTGEGEK--EKSVIVTVTPVARPTIDS 321
+++ ++ + + + R + LH +L S +P+ P + TD+ + L L + A V AS + +LL D G + A+DFLLQP + + +PR +KH+ +++V S VL W+F V +D DI F A F P P + HAT T KP V+G Y G+ +LSWDN YSRLRGK + +V VV + +T +Q G K + T TP++ P + S
Sbjct: 13 VQMVVSDAGDQVVCVERSFAALEGLHASLVTACDS------IPSFPLFPGMPTDAALTH-LCAELNDYFAHGSVKASAELHALLADDLCHGTGHMT------AIDFLLQPFEYEKVVIPRGSKHDVQLQVTNSSQVLVWKFEV-EDFDIDFNADFHVPTP---------------------------------------MYTEVFHATTRYQTTVKP---------VEGMYR---CPKPGVLTLSWDNTYSRLRGKTVHFVAHVV-----------EKSSMESALLAADALTHALQNGPTSNFLHKKALPTPTPMSSPALAS 258 The following BLAST results are available for this feature:
BLAST of NO15G00960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 8
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00960 ID=NO15G00960|Name=NO15G00960|organism=Nannochloropsis oceanica|type=gene|length=3293bpback to top protein sequence of NO15G00960.1 >NO15G00960.1-protein ID=NO15G00960.1-protein|Name=NO15G00960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1029bpback to top Synonyms
Publications
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