NO15G00910, NO15G00910 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00910 vs. NCBI_GenBank
Match: EWM22467.1 (rna binding protein [Nannochloropsis gaditana]) HSP 1 Score: 343.2 bits (879), Expect = 7.700e-91 Identity = 184/289 (63.67%), Postives = 203/289 (70.24%), Query Frame = 0 Query: 1 MTAEGLRGVFCDFSPYDVHIKTNMSGRSRGFGLLRFRSSDEAQRAIEQMHGCVVKDRKILVRLDRAHLEMMGKSPATMEVSETVTCGNIPWHTGDEVLACHMAQAGRLVSCQIQRHADTLRSKGWAIIRYLTPEEGANSVRSLHRTVLDGRTLNVRFYKPNKTVGDGEHAQSGFPPAYAVAPLGGSR-GGREVGVRG-------GGTRGGVVQMQGGXXXXXXXXXXXXXXXXXXXXXXAMGYDMYQRQQXXXXXXXXXXXXXXXXXXXXXXXXXXXMLMQPFPAGLRN 282 MTA GLR VF +FSPYDVHIKTNMSGRSRGFGLLRFRSS+EAQRAIEQMHG V++RKILVRLDRAHLEMMG SPATME S+TVTCGNIPWHTGDEVLACHMAQAGR+VSCQIQRHADTLRSKGWAIIRY+T EEG N+VRSLHRTVLD RTLNVRFY+PNKTV +G+ A SGFP AYAVAPLGG R GG E G+R GG + M GG +GYD+YQ+Q ++MQPFP +RN Sbjct: 100 MTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLACHMAQAGRVVSCQIQRHADTLRSKGWAIIRYVTVEEGTNAVRSLHRTVLDDRTLNVRFYRPNKTVVEGDAATSGFPSAYAVAPLGGERGGGAERGMRSRRMIQGPSDGMGGNLAMNGG-------------------RGGMLGYDLYQQQH--------VPLQHMHAHQHLHQPPLQHLMMQPFPGPVRN 361
BLAST of NO15G00910 vs. NCBI_GenBank
Match: XP_005852780.1 (hypothetical protein NGA_0682100 [Nannochloropsis gaditana CCMP526] >EKU23049.1 hypothetical protein NGA_0682100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 187.2 bits (474), Expect = 7.000e-44 Identity = 88/100 (88.00%), Postives = 93/100 (93.00%), Query Frame = 0 Query: 1 MTAEGLRGVFCDFSPYDVHIKTNMSGRSRGFGLLRFRSSDEAQRAIEQMHGCVVKDRKILVRLDRAHLEMMGKSPATMEVSETVTCGNIPWHTGDEVLAC 101 MTA GLR VF +FSPYDVHIKTNMSGRSRGFGLLRFRSS+EAQRAIEQMHG V++RKILVRLDRAHLEMMG SPATME S+TVTCGNIPWHTGDEVLAC Sbjct: 100 MTASGLRTVFSEFSPYDVHIKTNMSGRSRGFGLLRFRSSEEAQRAIEQMHGITVQERKILVRLDRAHLEMMGHSPATMEASDTVTCGNIPWHTGDEVLAC 199
BLAST of NO15G00910 vs. NCBI_GenBank
Match: EWM21128.1 (poly binding cytoplasmic isoform cra_c [Nannochloropsis gaditana]) HSP 1 Score: 129.8 bits (325), Expect = 1.300e-26 Identity = 63/163 (38.65%), Postives = 104/163 (63.80%), Query Frame = 0 Query: 1 MTAEGLRGVFCDFSPYDVHIKTNMSGRSRGFGLLRFRSSDEAQRAIEQMHGCVVKDRKILVRLDRAHLEM-----MGKSPATMEVSETVTCGNIPWHTGDEVLACHMAQAGRLVSCQIQRHADTLRSKGWAIIRYLTPEEGANSVRSLHRTVLDGRTLNVRFY 159 +T+E L+ +F +++P DVH+KTNM+GRSRGF L++F ++ A AI ++G ++ R I VR DR E +G +++ VT N+ W T + L +++AG +V +IQRHADT RSKGWAI + + +E N++ +L++TV+ R ++++FY Sbjct: 59 VTSEALQELFKEYNPLDVHVKTNMAGRSRGFALVKFTDAEVAGVAITNLNGYQLEGRPIQVRFDRQQAEAGEGEGVGNGGPVGGLTDRVTLTNLAWTTEEGELVSLLSKAGTVVGVEIQRHADTGRSKGWAIATFASRDEALNAINTLNKTVVRQRPISMKFY 221
BLAST of NO15G00910 vs. NCBI_GenBank
Match: XP_001421399.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO99692.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 107.5 bits (267), Expect = 7.100e-20 Identity = 63/174 (36.21%), Postives = 92/174 (52.87%), Query Frame = 0 Query: 2 TAEGLRGVFCDFSPYD-VHIKTNMSGRSRGFGLLRFRSSDEAQRAIEQMHGCVVKDRKILVRLD-----------RAHLEMMGKSPATMEVSETVTC--GNIPWHTGDEVLACHMAQAG-RLVSCQIQRHADTLRSKGWAIIRYLTPEEGANSVRSLHRTVLDGRTLNVRFYKP 161 T E LR +F + V I T GRSRG+GL+ F S EAQ A+ +M G + DR I VR D +A ++G +PA + C GN+ W T +E L H A G +V C++ R + RSKGWA++ + TPEE N++ +H + + GR++ VR +P Sbjct: 21 TIEDLRELFAECGGVTRVDIPTGRQGRSRGYGLVEFNSEAEAQAAVTRMDGTPLGDRTITVREDKAPTKAAGGAKKASASVLGDAPAG---GDGCRCYFGNLAWETSEETLTSHCASFGVNVVQCEVARQSGG-RSKGWALVDFATPEEAQNAIEQMHNSEIQGRSIIVRVERP 190
BLAST of NO15G00910 vs. NCBI_GenBank
Match: OUS49141.1 (hypothetical protein BE221DRAFT_202398 [Ostreococcus tauri]) HSP 1 Score: 101.3 bits (251), Expect = 5.100e-18 Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = 0 Query: 2 TAEGLRGVF--CDFSPYDVHIKTNMSGRSRGFGLLRFRSSDEAQRAIEQMHGCVVKDRKILVRLDRAHLEMMGKSPATMEVS--------ETVTC--GNIPWHTGDEVLACHMAQAG-RLVSCQIQRHADTLRSKGWAIIRYLTPEEGANSVRSLHRTVLDGRTLNVRFYKP 161 T + LR +F CD V I T GRSRG+GL+ F S EA+ A+ ++ G + DR I VR D+A + G S + + C GN+ W T +E L H A G ++ C++ R + RSKGWA++ + TPEE N++ +H + + GR++ VR +P Sbjct: 17 TDDELRALFAECD-GVIRVEIPTGRQGRSRGYGLVEFASEREARDAVSKVDGVPMGDRTITVREDKAPTKSAGGSKKMSASTLGDAPAGGDGCRCYFGNLAWETSEETLTGHAATFGLNVLQCEVARQSGG-RSKGWALVDFATPEEAQNAIEQMHNSEIQGRSIIVRVERP 186
BLAST of NO15G00910 vs. NCBI_GenBank
Match: XP_022841119.1 (Nucleotide-binding, alpha-beta plait [Ostreococcus tauri] >CEG01708.1 Nucleotide-binding, alpha-beta plait [Ostreococcus tauri]) HSP 1 Score: 100.9 bits (250), Expect = 6.600e-18 Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = 0 Query: 2 TAEGLRGVF--CDFSPYDVHIKTNMSGRSRGFGLLRFRSSDEAQRAIEQMHGCVVKDRKILVRLDRAHLEMMGKSPATMEVS--------ETVTC--GNIPWHTGDEVLACHMAQAG-RLVSCQIQRHADTLRSKGWAIIRYLTPEEGANSVRSLHRTVLDGRTLNVRFYKP 161 T + LR +F CD V I T GRSRG+GL+ F S EA+ A+ ++ G + DR I VR D+A + G S + + C GN+ W T +E L H A G ++ C++ R + RSKGWA++ + TPEE N++ +H + + GR++ VR +P Sbjct: 17 TDDELRALFAECD-GVTRVEIPTGRQGRSRGYGLVEFASEREARDAVSKVDGVPMGDRTITVREDKAPTKSAGGSKKMSASTLGDAPAGGDGCRCYFGNLAWETSEETLTGHAATFGLNVLQCEVARQSGG-RSKGWALVDFATPEEAQNAIEQMHNSEIQGRSIIVRVERP 186
BLAST of NO15G00910 vs. NCBI_GenBank
Match: XP_002506641.1 (predicted protein [Micromonas commoda] >ACO67899.1 predicted protein [Micromonas commoda]) HSP 1 Score: 95.9 bits (237), Expect = 2.100e-16 Identity = 55/169 (32.54%), Postives = 90/169 (53.25%), Query Frame = 0 Query: 2 TAEGLRGVFCDFSPYD-VHIKTNMSGRSRGFGLLRFRSSDEAQRAIEQMHGCVVKDRKILVRLDRA-----------HLEMMGKSPATMEVSETVTC--GNIPWHTGDEVLACHMAQAGRLVSCQIQRHADTLRSKGWAIIRYLTPEEGANSVRSLHRTVLDGRTLNVR 157 T + LRG+F V I T GRSRG+G++ + + +EAQ AI+ + G + DR I VR D+A + +G +PA ++ C GN+ W T +E L H +Q G +V ++ + RSKGW ++ + TP+ +++ +LH + L GR++ VR Sbjct: 19 TVDELRGIFSGCGTITLVDIPTGRQGRSRGYGIVEYSNVNEAQVAIQTLDGHTLGDRNITVREDKAPTKSAPSKSGGNRSTIGDTPA----ADGCRCYVGNLAWETNEESLIAHCSQVGTVVQAEVAKQPGG-RSKGWGLVDFETPDAANSAINTLHNSDLQGRSIIVR 182
BLAST of NO15G00910 vs. NCBI_GenBank
Match: XP_007514517.1 (predicted protein [Bathycoccus prasinos] >CCO14757.1 predicted protein [Bathycoccus prasinos]) HSP 1 Score: 83.6 bits (205), Expect = 1.100e-12 Identity = 55/174 (31.61%), Postives = 84/174 (48.28%), Query Frame = 0 Query: 2 TAEGLRGVFCDFSPYDVHIKTNMSGRSRGFGLLRFRSSDEAQRAIEQMHGCVVKDRKILVRLD-------RAHLEMMGKSPATM-----EVSETVTC--GNIPWHTGDEVLACHMAQAGR-LVSCQIQRHADTLRSKGWAIIRYLTPEEGANSVRSLHRTVLDGRTLNVRFYKP 161 T E L+G+F D ++ I T RSRG+ L+ F AQ A++ M+G + DR I VR D ++ G +P E E C GN+ W T ++ L H G ++ C++ R + RSKGWA+I + + E V++LH T R++ VR +P Sbjct: 21 TVEELQGLFTDAE--NIEIPTGRQNRSRGYALVSFSDESAAQSAMQAMNGHALGDRNISVRADNPLPKAPKSSSRGSGGAPVQRPTNLPEAEEGCRCYVGNLAWETDEQALIEHCQTIGHPVLRCEVARQSGG-RSKGWALIDFASKEAADAGVKALHDTECRARSIIVRAERP 191
BLAST of NO15G00910 vs. NCBI_GenBank
Match: XP_003061345.1 (hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla CCMP1545] >EEH54995.1 hypothetical protein MICPUCDRAFT_60999 [Micromonas pusilla CCMP1545]) HSP 1 Score: 82.8 bits (203), Expect = 1.900e-12 Identity = 57/187 (30.48%), Postives = 89/187 (47.59%), Query Frame = 0 Query: 18 VHIKTNMSGRSRGFGLLRFRSSDEAQRAIEQMHGCVVKDRKILVRLDRA------------------HLEMMGKSPATMEVSETVTC--GNIPWHTGDEVLA------CHMAQAGRLVSCQIQRHADTLRSKGWAIIRYLTPEEGANSVRSLHRTVLDGRTLNVRFYKP-NKTVGDGEHAQSGFPPA 178 V I GRSRG+G++ + S+ EAQ AI Q+ G + DR + VR D A +MG++PA +E C GN+ W T E L H + G +V+ ++ + RSKGW ++ + +P +++ +LH + L GR++ VR + T G G A +G P A Sbjct: 37 VDIPKGRQGRSRGYGIVEYSSAAEAQAAIAQLEGHTLGDRNLTVREDNAPTKTANSGGGSXXXXXXXXXNVMGETPA----AEGCRCYIGNLAWETTAESLVGAFEDYPHFSSVGSVVNAEVAKQPGG-RSKGWGLVDFESPAAAESAIATLHNSDLQGRSIIVRLERAGGATKGPGGGANAGRPEA 218
BLAST of NO15G00910 vs. NCBI_GenBank
Match: CBN79621.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 79.7 bits (195), Expect = 1.600e-11 Identity = 58/210 (27.62%), Postives = 79/210 (37.62%), Query Frame = 0 Query: 2 TAEGLRGVFCDFSPYDVHIKTNMSGRSRGFGLLRFRSSDEAQRAIEQMHGCVVKDRKILVRLDR-------------------------------------------------------AHLEMMGKSPATMEVSETVTCGNIPWHTGDEVLACHMAQAGRLVSCQIQRHADTLRSKGWAIIRYLTPEEGANSVRSLHRTVLDGRTLNVR 157 T E L+ +F + PYD H+KTNM+GRSRGFG+LRF + + QRAI +M + R I VR DR T D+ L AG +VS +Q A + RSKGW +++Y +P E +V L+ T+L R L VR Sbjct: 150 TDEDLQQIFAPYEPYDCHVKTNMAGRSRGFGILRFATPELGQRAISEMQNYQIDSRPIQVREDREIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTDDDLLATFQTAGAVVSAHVQ-IAPSGRSKGWGLVKYSSPTETETAVTELNNTMLHERRLTVR 358 The following BLAST results are available for this feature:
BLAST of NO15G00910 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20 Position : 0 Zoom : x 1
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00910 ID=NO15G00910|Name=NO15G00910|organism=Nannochloropsis oceanica|type=gene|length=3049bpback to top protein sequence of NO15G00910.2 >NO15G00910.2-protein ID=NO15G00910.2-protein|Name=NO15G00910.2|organism=Nannochloropsis oceanica|type=polypeptide|length=282bpback to top protein sequence of NO15G00910.1 >NO15G00910.1-protein ID=NO15G00910.1-protein|Name=NO15G00910.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bpback to top Synonyms
Publications
|