NO15G00830, NO15G00830 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00830 vs. NCBI_GenBank
Match: XP_005854057.1 (hypothetical protein NGA_0486600 [Nannochloropsis gaditana CCMP526] >EKU22304.1 hypothetical protein NGA_0486600 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 156.0 bits (393), Expect = 1.200e-34 Identity = 99/163 (60.74%), Postives = 112/163 (68.71%), Query Frame = 0 Query: 3 SQTRSVLPLLSIALLLAAAIAWTVPSPLQRPQSSLAPPTTSRTAIPSRL-PSSFP----------LTRRLAXXXXXXXXXXXXKLPMLLDVETRGGILFVSTLGTAAVFGGYSVATALGVDGQKAGIYISVAMTLGMVAWTASYIFRVANKDMTYAKQLKNYE 155 S R +L LL +ALLLA AWT+P PL + SL+ + + P + P FP LTRR+A KLPMLLDVETRGGILFVSTL TAA+F GY+VATALGVDG +AGIYISVAMTLGMVAWT +YIFRVANKDMTYAKQLKNYE Sbjct: 5 SAGRPMLLLLPLALLLAGVRAWTMPKPLLLTRPSLSRSSLLGLSRPGHISPPRFPSIASSSSTSHLTRRMA---TEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVAMTLGMVAWTFTYIFRVANKDMTYAKQLKNYE 164
BLAST of NO15G00830 vs. NCBI_GenBank
Match: EWM22472.1 (Protein of unknown function DUF3007 [Nannochloropsis gaditana]) HSP 1 Score: 156.0 bits (393), Expect = 1.200e-34 Identity = 99/163 (60.74%), Postives = 112/163 (68.71%), Query Frame = 0 Query: 3 SQTRSVLPLLSIALLLAAAIAWTVPSPLQRPQSSLAPPTTSRTAIPSRL-PSSFP----------LTRRLAXXXXXXXXXXXXKLPMLLDVETRGGILFVSTLGTAAVFGGYSVATALGVDGQKAGIYISVAMTLGMVAWTASYIFRVANKDMTYAKQLKNYE 155 S R +L LL +ALLLA AWT+P PL + SL+ + + P + P FP LTRR+A KLPMLLDVETRGGILFVSTL TAA+F GY+VATALGVDG +AGIYISVAMTLGMVAWT +YIFRVANKDMTYAKQLKNYE Sbjct: 22 SAGRPMLLLLPLALLLAGVRAWTMPKPLLLTRPSLSRSSLLGLSRPGHISPPRFPSIASSSSTSHLTRRMA---TEDGPEKANKLPMLLDVETRGGILFVSTLVTAAIFAGYNVATALGVDGLQAGIYISVAMTLGMVAWTFTYIFRVANKDMTYAKQLKNYE 181
BLAST of NO15G00830 vs. NCBI_GenBank
Match: CBJ31047.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 86.7 bits (213), Expect = 8.600e-14 Identity = 45/80 (56.25%), Postives = 52/80 (65.00%), Query Frame = 0 Query: 76 LPMLLDVETRGGILFVSTLGTAAVFGGYSVATALGVDGQKAGIYISVAMTL-GMVAWTASYIFRVANKDMTYAKQLKNYE 155 LP LD TRGG + V TL G Y TA+GVDG KAG ++ V TL G++AW SY FRVA K+MTYA QLKNYE Sbjct: 74 LPFFLDPSTRGGAVVVPTLSLLLPLGAYGALTAVGVDGSKAGAWVGVGYTLIGLIAWVGSYFFRVATKNMTYAVQLKNYE 153
BLAST of NO15G00830 vs. NCBI_GenBank
Match: XP_005763457.1 (hypothetical protein EMIHUDRAFT_419792 [Emiliania huxleyi CCMP1516] >XP_005777833.1 hypothetical protein EMIHUDRAFT_420144 [Emiliania huxleyi CCMP1516] >EOD11028.1 hypothetical protein EMIHUDRAFT_419792 [Emiliania huxleyi CCMP1516] >EOD25404.1 hypothetical protein EMIHUDRAFT_420144 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 75.5 bits (184), Expect = 2.000e-10 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 0 Query: 76 LPMLLDVETRGGILFVSTLGTAAVFGGYS-VATALGVDGQKAGIYISVA-MTLGMVAWTASYIFRVANKDMTYAKQLKNYE 155 LP LD+ T+GGI+F S +G A F Y+ + +G+D AG I V + LG VAWT++Y+FRVANKDMTYAKQL++YE Sbjct: 63 LPFFLDIGTKGGIVFYSVIGIVAPFLLYNFLQDQMGMDVVGAGNVILVGYVGLGTVAWTSTYVFRVANKDMTYAKQLRDYE 143
BLAST of NO15G00830 vs. NCBI_GenBank
Match: XP_005767818.1 (hypothetical protein EMIHUDRAFT_427662 [Emiliania huxleyi CCMP1516] >EOD15389.1 hypothetical protein EMIHUDRAFT_427662 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 75.5 bits (184), Expect = 2.000e-10 Identity = 43/81 (53.09%), Postives = 57/81 (70.37%), Query Frame = 0 Query: 76 LPMLLDVETRGGILFVSTLGTAAVFGGYS-VATALGVDGQKAGIYISVA-MTLGMVAWTASYIFRVANKDMTYAKQLKNYE 155 LP LD+ T+GGI+F S +G A F Y+ + +G+D AG I V + LG VAWT++Y+FRVANKDMTYAKQL++YE Sbjct: 63 LPFFLDIGTKGGIVFYSVIGIVAPFLLYNFLQDQMGMDVVGAGNVILVGYVGLGTVAWTSTYVFRVANKDMTYAKQLRDYE 143
BLAST of NO15G00830 vs. NCBI_GenBank
Match: GAX09273.1 (hypothetical protein FisN_17Lu018 [Fistulifera solaris]) HSP 1 Score: 70.5 bits (171), Expect = 6.400e-9 Identity = 42/82 (51.22%), Postives = 53/82 (64.63%), Query Frame = 0 Query: 75 KLPMLLDVETRGGILFVSTLGTAAVFGGYSVAT-ALGVDGQKAGIYISVAMTL-GMVAWTASYIFRVANKDMTYAKQLKNYE 155 KLP LD T+GG++F+S + Y+VAT G D + GI I V T+ VAW ++YIFRVA KDMTYAKQLK+YE Sbjct: 68 KLPFWLDPGTKGGVVFLSFVLFLVPLLAYNVATNVFGADEIETGITIGVGFTVFATVAWVSTYIFRVATKDMTYAKQLKDYE 149
BLAST of NO15G00830 vs. NCBI_GenBank
Match: KOO53760.1 (hypothetical protein Ctob_009609 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 69.3 bits (168), Expect = 1.400e-8 Identity = 57/147 (38.78%), Postives = 78/147 (53.06%), Query Frame = 0 Query: 12 LSIALLLAAAIAWTVPSPLQRPQSSLAPPTTSRTAIP--SRLPSSFPLTRRLAXXXXXXXXXXXXKLPMLLDVETRGGILFVSTLGTAAVFGGYS-VATALGVDGQKAGIYISVA-MTLGMVAWTASYIFRVANKDMTYAKQLKNYE 155 ++ LL A+ V + P S+LA P + R AI S LP++ +R A LP L+ T+GGI+F S +G F YS + LG D AG I + + +G V WT SY+FRVANKDMTYA+QL++YE Sbjct: 1 MAARLLPLLALGLGVVHGFRTPPSALAAP-SRRAAISGLSPLPAAAVTSRACAPTLAAPAESDKKSLPFFLNPNTKGGIIFWSIVGIVLPFVAYSFMLDNLGWDVVLAGNVILIGYVGVGTVVWTGSYVFRVANKDMTYAQQLRDYE 146
BLAST of NO15G00830 vs. NCBI_GenBank
Match: EJK50173.1 (hypothetical protein THAOC_30885, partial [Thalassiosira oceanica]) HSP 1 Score: 67.8 bits (164), Expect = 4.100e-8 Identity = 40/81 (49.38%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 76 LPMLLDVETRGGILFVSTLGTAAVFGGYSVATA-LGVDGQKAGIYISVAMT-LGMVAWTASYIFRVANKDMTYAKQLKNYE 155 LPMLLD T+GG +F+S + Y+VAT +G+D + G I V + + M+ W SY+FRVA KDMTYAKQLK+YE Sbjct: 158 LPMLLDPGTKGGAVFLSVVLFVVPLIVYNVATGPMGMDEIEVGRNIGVGFSVVSMIFWLGSYVFRVATKDMTYAKQLKDYE 238
BLAST of NO15G00830 vs. NCBI_GenBank
Match: OEU16366.1 (hypothetical protein FRACYDRAFT_185821 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 67.8 bits (164), Expect = 4.100e-8 Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0 Query: 76 LPMLLDVETRGGILFVSTLGTAAVFGGYSVATAL-GVDGQKAGIYISVAMT-LGMVAWTASYIFRVANKDMTYAKQLKNYE 155 LP LD TRGG + + + F GY++AT++ G++G AG +I V T + W +YIFRVA KDMTYAKQLK+YE Sbjct: 15 LPFWLDPGTRGGAVVLGIILFIVPFIGYAIATSVFGIEGVDAGKWIGVGFTAAATLVWVFTYIFRVATKDMTYAKQLKDYE 95
BLAST of NO15G00830 vs. NCBI_GenBank
Match: WP_007308309.1 (DUF3007 domain-containing protein [Crocosphaera watsonii] >EAM47865.1 hypothetical protein CwatDRAFT_0506 [Crocosphaera watsonii WH 8501] >EHJ09754.1 hypothetical protein CWATWH0003_5479 [Crocosphaera watsonii WH 0003] >CCQ64436.1 hypothetical protein CWATWH0401_128 [Crocosphaera watsonii WH 0401] >CCQ49772.1 hypothetical protein CWATWH8502_3621 [Crocosphaera watsonii WH 8502] >CCQ54138.1 hypothetical protein CWATWH0005_1195 [Crocosphaera watsonii WH 0005] >CCQ70271.1 hypothetical protein CWATWH0402_2591 [Crocosphaera watsonii WH 0402]) HSP 1 Score: 63.9 bits (154), Expect = 6.000e-7 Identity = 33/67 (49.25%), Postives = 46/67 (68.66%), Query Frame = 0 Query: 91 VSTLGTAAVFGG---YSVATALGVDGQKAGIYISVAMTLGMVAWTASYIFRVANKDMTYAKQLKNYE 155 V T+ A GG Y V A+G+DG AG++ + + ++AWT+SY+FRVANKDMTY +QLK+YE Sbjct: 6 VITVSLAIFVGGGLLYIVFQAIGLDGLSAGVWSQALLVIVVLAWTSSYLFRVANKDMTYNQQLKDYE 72 The following BLAST results are available for this feature:
BLAST of NO15G00830 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 10
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00830 ID=NO15G00830|Name=NO15G00830|organism=Nannochloropsis oceanica|type=gene|length=1349bpback to top protein sequence of NO15G00830.1 >NO15G00830.1-protein ID=NO15G00830.1-protein|Name=NO15G00830.1|organism=Nannochloropsis oceanica|type=polypeptide|length=187bpback to top Synonyms
Publications
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