NO15G00680, NO15G00680 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00680 vs. NCBI_GenBank
Match: EWM22518.1 (hypothetical protein Naga_100558g3 [Nannochloropsis gaditana]) HSP 1 Score: 273.9 bits (699), Expect = 6.600e-70 Identity = 143/244 (58.61%), Postives = 170/244 (69.67%), Query Frame = 0 Query: 90 KPYPRWAYGLRFNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPSLL--PSSGTTEEEREQIWSELIQIQVKEIIRFLEIEGEHHVWAHGAGCLPAIQYTSSLPPSSSSSLF----------VKSLTLASPFVFSPGKTSLPSWYSANDAAVPLCVTESVAG-----GGGKEGAKEQRVFYNKRLEGLPALAELG 317 +PYP WAY LRFNDGLI + LPG+ PAD+FLRVVGDE KEK + +AP+++ PGGPGLAHDYTETLEALVY DRRV++FDPVGTGQSS LPP+L P G E +Q WS L+Q Q++EI+RFLEI+ HHVWA GA CLPA+Q+T++ P SS VKSLTLA PFVF+PG SLPS YS AAVPLCVTESVAG RV Y ++ EGLP L ++G Sbjct: 51 QPYPPWAYRLRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADGPPGGAETAEWKQAWSALLQEQLREILRFLEID-SHHVWAQGAACLPALQHTAAFAPPSSXXXXXXXXXXXARGVKSLTLADPFVFAPGARSLPSLYSDRGAAVPLCVTESVAGVXXXXXXXXXXXXXDRVHYERQWEGLPELGKVG 293
BLAST of NO15G00680 vs. NCBI_GenBank
Match: KOO30126.1 (hypothetical protein Ctob_012499 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 92.0 bits (227), Expect = 3.500e-15 Identity = 63/178 (35.39%), Postives = 95/178 (53.37%), Query Frame = 0 Query: 86 AWCGKPYPRWAYGLRFNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPSLLPSSGTTEEEREQIWSELIQIQVKEIIRFLE---IEGEH--HVWAHGAGCLPAIQYTSSLPPSSSSSLFVKSLTLASPF 259 AWCG+P P WA+ L+++ + G + A V RVVGD +E++ V P++V G PG +DY ETLEAL +DRRV GT LPP L + E Q++ + R L+ + G+ H+ AHG G +PA++ +S S++ ++ V+SLTL SP+ Sbjct: 32 AWCGEPVPSWAFYLQWDQTALPFEYQGAS--AQVRYRVVGDIVRERKAGVPPVVVI-GTPGFGYDYLETLEALTVSDRRVAMVILAGTAAGED-LPPVLRTADACAE-------------QIRAVCRALKPAALGGKPAVHLVAHGLGAVPALRVLAS---SAADAIGVRSLTLISPW 189
BLAST of NO15G00680 vs. NCBI_GenBank
Match: CBN77177.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 85.9 bits (211), Expect = 2.500e-13 Identity = 70/222 (31.53%), Postives = 100/222 (45.05%), Query Frame = 0 Query: 119 VFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPSLLPSSGTTEEEREQIWSELIQIQVKEIIRFLEIEGEHHVWAHGAGCLPAIQYTSSL------PPSSSSSLFVKSLTLASPFV----FSPG-KTSLPSWYSANDAAVPLCVTESVAG------GGGKEGAKEQRVFYNKRLEGLPALAELGGGGGFRC 324 +F R VG+ +K+ P+++ PGGPGL HDY ETLE DR V+ FDPVGTG S S LPS + + + + Q + ++ + ++ HV HG A++ SL PP V S+ LASP + SP +L + Y + PLC+ ++AG GG K+ R R +G A A G G C Sbjct: 19 LFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETLEGAAMEDRVVLLFDPVGTGNS------SALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNA-FHVLGHGTSAEAALELGRSLGKASPRPPGPEPEA-VLSVILASPVLGENELSPDFLEALRTPYIKDGNEPPLCLETAMAGRSSDGFAGGLAAMKQDR-----RSKGSAAAA---GAGPLAC 224
BLAST of NO15G00680 vs. NCBI_GenBank
Match: XP_005779667.1 (hypothetical protein EMIHUDRAFT_205238 [Emiliania huxleyi CCMP1516] >EOD27238.1 hypothetical protein EMIHUDRAFT_205238 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 80.1 bits (196), Expect = 1.400e-11 Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = 0 Query: 73 GASMLGSAARP--AQAWCGKPYPRWAYGLRFNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGT--GQSSPIL 181 GA ++ +AA P A WCG+ P WA+ ++++DG ++P + + RVVGD +E + V P+++ G PGL +DY E LEAL +DRRV+ GT S+P+L Sbjct: 8 GAFVVAAAAAPRAAVGWCGEAVPSWAFFVKWDDG--RVPFEWEGAKGEAYCRVVGDRAREAKAGVPPILLV-GTPGLGYDYLENLEALTVSDRRVVEVVFAGTNGAASAPLL 116
BLAST of NO15G00680 vs. NCBI_GenBank
Match: XP_005764742.1 (hypothetical protein EMIHUDRAFT_371334 [Emiliania huxleyi CCMP1516] >EOD12313.1 hypothetical protein EMIHUDRAFT_371334 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 67.4 bits (163), Expect = 9.400e-8 Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 0 Query: 84 AQAWCGKPYPRWAYGLRFNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPSLLPSSGTTEEER 196 A+AWCG PYP +AY L + + G A +RVVGD E K + PL+ P PGL++DY E LEAL + RRV AF V S P + + + G+ + +R Sbjct: 49 ARAWCGDPYPPFAYSLPW----FEFDSSGCA------VRVVGDLTSESGKGLRPLVALP-TPGLSYDYLENLEALTVSQRRV-AFIAVPPAASLPAATRAAVDAIGSLDAKR 148
BLAST of NO15G00680 vs. NCBI_GenBank
Match: XP_002503835.1 (predicted protein [Micromonas commoda] >ACO65093.1 predicted protein [Micromonas commoda]) HSP 1 Score: 67.0 bits (162), Expect = 1.200e-7 Identity = 83/314 (26.43%), Postives = 127/314 (40.45%), Query Frame = 0 Query: 59 SRKDLLVQAGSLLFGASMLGSAARPAQA---WCG------KPYPRWAYGLRFNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPS--------------LLPSSGTTEEEREQIWSELIQIQVKEIIRFLEIEGEHHVWAHGAGCLPAIQYT--------SSLPPSSSSSLFVKSLTLAS-PFVFS-------PGKTSLPSWYSANDAAVPLCVTESVAGGGGKEGAKEQ----------RVFYNKRLEG--LPALAELGGGGGF 322 SR+D+LV+ F ++++ +R A A +CG P+WA +++G + + A F+R++GD+ K + + P++ GGPGL Y + LE L R V ++D +G + SP P P GT L ++ E+ R + G HV AHG G + A+ + + SS S+ + SLTL S P ++ +P Y A V L E AGGG A + R+F +KR G L G GGGF Sbjct: 57 SRRDVLVRG----FTSALILPRSRAALADDLFCGYYSQNSAVVPQWARETPWSEGYVDTSAAVGLEGAKTFVRILGDQKKAESAGLTPVLCLHGGPGLGFKYMDGLEVLASEKREVASYDQIGCAR-SPYAPTKKNXXXXXXXXXXXXXXPPPGT-------YTPALFGRELTEVRRATGL-GRVHVVAHGWGGMLALDHILGGNGVDGGAAIGGSSPSMSIASLTLVSVPPSYARLIADRREALARMPGEY----AQVLLDGDEGGAGGGNLSDAGRKLYAIALDEWTRLFVSKRAAGACYRGLKTAGAGGGF 353
BLAST of NO15G00680 vs. NCBI_GenBank
Match: XP_005837025.1 (hypothetical protein GUITHDRAFT_104442 [Guillardia theta CCMP2712] >EKX50045.1 hypothetical protein GUITHDRAFT_104442 [Guillardia theta CCMP2712]) HSP 1 Score: 65.9 bits (159), Expect = 2.700e-7 Identity = 56/195 (28.72%), Postives = 89/195 (45.64%), Query Frame = 0 Query: 70 LLFGASMLGSAARPAQAWCGKPYPRWAYGLRFNDGLIQIPLPG--LAKPADVFLRVVGDENKEKQK------HVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPSLLPSSGTTEEEREQIWSELIQIQVKEIIRFLEIEGEHHVWAHGAGCLPAIQYTSSLPPSSSSSLFVKSLTLAS 257 L G ++ S AR + A CG W + + +++ + + G + +VF RVVGDE+KE+ K PL+V H+Y +EA+ +DRRVI +D +GTG S P LP + + E E + +I + L+++ + HV +G G A + + S V SL AS Sbjct: 4 LAAGNVLVLSQARSSDALCGTKPRSWEFWMPWSEETVTVATEGSVSSNKREVFYRVVGDESKERSKVKGKEGKRKPLLVI-ADKFKDHEYLTVMEAVCTSDRRVILYDALGTGLSEP-LPAETRQALSSNPANAESFAVEELTRLWADISKTLKVD-QVHVLGNGFGAKVAASFAKQEKTAKS----VASLIFAS 191 The following BLAST results are available for this feature:
BLAST of NO15G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 7
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00680 ID=NO15G00680|Name=NO15G00680|organism=Nannochloropsis oceanica|type=gene|length=2825bpback to top protein sequence of NO15G00680.1 >NO15G00680.1-protein ID=NO15G00680.1-protein|Name=NO15G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=325bpback to top Synonyms
Publications
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