NO15G00680, NO15G00680 (gene) Nannochloropsis oceanica

Overview
NameNO15G00680
Unique NameNO15G00680
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2825
Alignment locationchr15:222471..225295 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:222471..225295 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
Homology
BLAST of NO15G00680 vs. NCBI_GenBank
Match: EWM22518.1 (hypothetical protein Naga_100558g3 [Nannochloropsis gaditana])

HSP 1 Score: 273.9 bits (699), Expect = 6.600e-70
Identity = 143/244 (58.61%), Postives = 170/244 (69.67%), Query Frame = 0
Query:   90 KPYPRWAYGLRFNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPSLL--PSSGTTEEEREQIWSELIQIQVKEIIRFLEIEGEHHVWAHGAGCLPAIQYTSSLPPSSSSSLF----------VKSLTLASPFVFSPGKTSLPSWYSANDAAVPLCVTESVAG-----GGGKEGAKEQRVFYNKRLEGLPALAELG 317
            +PYP WAY LRFNDGLI + LPG+  PAD+FLRVVGDE KEK + +AP+++ PGGPGLAHDYTETLEALVY DRRV++FDPVGTGQSS  LPP+L   P  G    E +Q WS L+Q Q++EI+RFLEI+  HHVWA GA CLPA+Q+T++  P SS              VKSLTLA PFVF+PG  SLPS YS   AAVPLCVTESVAG               RV Y ++ EGLP L ++G
Sbjct:   51 QPYPPWAYRLRFNDGLIPVSLPGMPAPADLFLRVVGDEQKEKDQGLAPILLVPGGPGLAHDYTETLEALVYGDRRVVSFDPVGTGQSSRSLPPALADGPPGGAETAEWKQAWSALLQEQLREILRFLEID-SHHVWAQGAACLPALQHTAAFAPPSSXXXXXXXXXXXARGVKSLTLADPFVFAPGARSLPSLYSDRGAAVPLCVTESVAGVXXXXXXXXXXXXXDRVHYERQWEGLPELGKVG 293          
BLAST of NO15G00680 vs. NCBI_GenBank
Match: KOO30126.1 (hypothetical protein Ctob_012499 [Chrysochromulina sp. CCMP291])

HSP 1 Score: 92.0 bits (227), Expect = 3.500e-15
Identity = 63/178 (35.39%), Postives = 95/178 (53.37%), Query Frame = 0
Query:   86 AWCGKPYPRWAYGLRFNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPSLLPSSGTTEEEREQIWSELIQIQVKEIIRFLE---IEGEH--HVWAHGAGCLPAIQYTSSLPPSSSSSLFVKSLTLASPF 259
            AWCG+P P WA+ L+++   +     G +  A V  RVVGD  +E++  V P++V  G PG  +DY ETLEAL  +DRRV      GT      LPP L  +    E             Q++ + R L+   + G+   H+ AHG G +PA++  +S   S++ ++ V+SLTL SP+
Sbjct:   32 AWCGEPVPSWAFYLQWDQTALPFEYQGAS--AQVRYRVVGDIVRERKAGVPPVVVI-GTPGFGYDYLETLEALTVSDRRVAMVILAGTAAGED-LPPVLRTADACAE-------------QIRAVCRALKPAALGGKPAVHLVAHGLGAVPALRVLAS---SAADAIGVRSLTLISPW 189          
BLAST of NO15G00680 vs. NCBI_GenBank
Match: CBN77177.1 (expressed unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 85.9 bits (211), Expect = 2.500e-13
Identity = 70/222 (31.53%), Postives = 100/222 (45.05%), Query Frame = 0
Query:  119 VFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPSLLPSSGTTEEEREQIWSELIQIQVKEIIRFLEIEGEHHVWAHGAGCLPAIQYTSSL------PPSSSSSLFVKSLTLASPFV----FSPG-KTSLPSWYSANDAAVPLCVTESVAG------GGGKEGAKEQRVFYNKRLEGLPALAELGGGGGFRC 324
            +F R VG+   +K+    P+++ PGGPGL HDY ETLE     DR V+ FDPVGTG S      S LPS     +    + +  +  Q + ++ + ++    HV  HG     A++   SL      PP       V S+ LASP +     SP    +L + Y  +    PLC+  ++AG       GG    K+ R     R +G  A A   G G   C
Sbjct:   19 LFARTVGNGKDQKKAQHNPVVIIPGGPGLPHDYLETLEGAAMEDRVVLLFDPVGTGNS------SALPSVDAAADSPNLLGTASLVAQTRAVVDYFKVNA-FHVLGHGTSAEAALELGRSLGKASPRPPGPEPEA-VLSVILASPVLGENELSPDFLEALRTPYIKDGNEPPLCLETAMAGRSSDGFAGGLAAMKQDR-----RSKGSAAAA---GAGPLAC 224          
BLAST of NO15G00680 vs. NCBI_GenBank
Match: XP_005779667.1 (hypothetical protein EMIHUDRAFT_205238 [Emiliania huxleyi CCMP1516] >EOD27238.1 hypothetical protein EMIHUDRAFT_205238 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 80.1 bits (196), Expect = 1.400e-11
Identity = 43/112 (38.39%), Postives = 66/112 (58.93%), Query Frame = 0
Query:   73 GASMLGSAARP--AQAWCGKPYPRWAYGLRFNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGT--GQSSPIL 181
            GA ++ +AA P  A  WCG+  P WA+ ++++DG  ++P        + + RVVGD  +E +  V P+++  G PGL +DY E LEAL  +DRRV+     GT    S+P+L
Sbjct:    8 GAFVVAAAAAPRAAVGWCGEAVPSWAFFVKWDDG--RVPFEWEGAKGEAYCRVVGDRAREAKAGVPPILLV-GTPGLGYDYLENLEALTVSDRRVVEVVFAGTNGAASAPLL 116          
BLAST of NO15G00680 vs. NCBI_GenBank
Match: XP_005764742.1 (hypothetical protein EMIHUDRAFT_371334 [Emiliania huxleyi CCMP1516] >EOD12313.1 hypothetical protein EMIHUDRAFT_371334 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 67.4 bits (163), Expect = 9.400e-8
Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 0
Query:   84 AQAWCGKPYPRWAYGLRFNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPSLLPSSGTTEEER 196
            A+AWCG PYP +AY L +     +    G A      +RVVGD   E  K + PL+  P  PGL++DY E LEAL  + RRV AF  V    S P    + + + G+ + +R
Sbjct:   49 ARAWCGDPYPPFAYSLPW----FEFDSSGCA------VRVVGDLTSESGKGLRPLVALP-TPGLSYDYLENLEALTVSQRRV-AFIAVPPAASLPAATRAAVDAIGSLDAKR 148          
BLAST of NO15G00680 vs. NCBI_GenBank
Match: XP_002503835.1 (predicted protein [Micromonas commoda] >ACO65093.1 predicted protein [Micromonas commoda])

HSP 1 Score: 67.0 bits (162), Expect = 1.200e-7
Identity = 83/314 (26.43%), Postives = 127/314 (40.45%), Query Frame = 0
Query:   59 SRKDLLVQAGSLLFGASMLGSAARPAQA---WCG------KPYPRWAYGLRFNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPS--------------LLPSSGTTEEEREQIWSELIQIQVKEIIRFLEIEGEHHVWAHGAGCLPAIQYT--------SSLPPSSSSSLFVKSLTLAS-PFVFS-------PGKTSLPSWYSANDAAVPLCVTESVAGGGGKEGAKEQ----------RVFYNKRLEG--LPALAELGGGGGF 322
            SR+D+LV+     F ++++   +R A A   +CG         P+WA    +++G +        + A  F+R++GD+ K +   + P++   GGPGL   Y + LE L    R V ++D +G  + SP  P                  P  GT           L   ++ E+ R   + G  HV AHG G + A+ +          +    SS S+ + SLTL S P  ++            +P  Y    A V L   E  AGGG    A  +          R+F +KR  G     L   G GGGF
Sbjct:   57 SRRDVLVRG----FTSALILPRSRAALADDLFCGYYSQNSAVVPQWARETPWSEGYVDTSAAVGLEGAKTFVRILGDQKKAESAGLTPVLCLHGGPGLGFKYMDGLEVLASEKREVASYDQIGCAR-SPYAPTKKNXXXXXXXXXXXXXXPPPGT-------YTPALFGRELTEVRRATGL-GRVHVVAHGWGGMLALDHILGGNGVDGGAAIGGSSPSMSIASLTLVSVPPSYARLIADRREALARMPGEY----AQVLLDGDEGGAGGGNLSDAGRKLYAIALDEWTRLFVSKRAAGACYRGLKTAGAGGGF 353          
BLAST of NO15G00680 vs. NCBI_GenBank
Match: XP_005837025.1 (hypothetical protein GUITHDRAFT_104442 [Guillardia theta CCMP2712] >EKX50045.1 hypothetical protein GUITHDRAFT_104442 [Guillardia theta CCMP2712])

HSP 1 Score: 65.9 bits (159), Expect = 2.700e-7
Identity = 56/195 (28.72%), Postives = 89/195 (45.64%), Query Frame = 0
Query:   70 LLFGASMLGSAARPAQAWCGKPYPRWAYGLRFNDGLIQIPLPG--LAKPADVFLRVVGDENKEKQK------HVAPLIVFPGGPGLAHDYTETLEALVYADRRVIAFDPVGTGQSSPILPPSLLPSSGTTEEEREQIWSELIQIQVKEIIRFLEIEGEHHVWAHGAGCLPAIQYTSSLPPSSSSSLFVKSLTLAS 257
            L  G  ++ S AR + A CG     W + + +++  + +   G   +   +VF RVVGDE+KE+ K         PL+V        H+Y   +EA+  +DRRVI +D +GTG S P LP     +  +     E    E +     +I + L+++ + HV  +G G   A  +      + S    V SL  AS
Sbjct:    4 LAAGNVLVLSQARSSDALCGTKPRSWEFWMPWSEETVTVATEGSVSSNKREVFYRVVGDESKERSKVKGKEGKRKPLLVI-ADKFKDHEYLTVMEAVCTSDRRVILYDALGTGLSEP-LPAETRQALSSNPANAESFAVEELTRLWADISKTLKVD-QVHVLGNGFGAKVAASFAKQEKTAKS----VASLIFAS 191          
The following BLAST results are available for this feature:
BLAST of NO15G00680 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 7
Match NameE-valueIdentityDescription
EWM22518.16.600e-7058.61hypothetical protein Naga_100558g3 [Nannochloropsi... [more]
KOO30126.13.500e-1535.39hypothetical protein Ctob_012499 [Chrysochromulina... [more]
CBN77177.12.500e-1331.53expressed unknown protein [Ectocarpus siliculosus][more]
XP_005779667.11.400e-1138.39hypothetical protein EMIHUDRAFT_205238 [Emiliania ... [more]
XP_005764742.19.400e-838.39hypothetical protein EMIHUDRAFT_371334 [Emiliania ... [more]
XP_002503835.11.200e-726.43predicted protein [Micromonas commoda] >ACO65093.1... [more]
XP_005837025.12.700e-728.72hypothetical protein GUITHDRAFT_104442 [Guillardia... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL148nonsL148Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR063ngnoR063Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001541NSK001541Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00680.1NO15G00680.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|670408gene_4617Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100558g3gene7922Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00680.1NO15G00680.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00680 ID=NO15G00680|Name=NO15G00680|organism=Nannochloropsis oceanica|type=gene|length=2825bp
ATCTGAAGAGCCTCTCCACACACTCACCTCACAACTACAAATACCACATA
TAAATAGACGGACATGGCAGCACGGCCACTCTTTCGACATCTATCATTAC
CGGCGCTTAGAAACCTCCTCTTGCTACTATTTCTCTACCTTTTGGCGTCC
GTCAATGCATTTTTGATCCCATTTGCCTCTCCGTCCTGTCGGACCCCTCT
AGTGCTCCGCGCCACCTCCTTTTCCGATCACCAGCATTCCCGCAAGGATC
TTTTGGTGCAAGCAGGAAGTCTTCTGTTTGGTGCATCAATGTTGGGAAGC
GCAGCTCGTCCGGCCCAGGCATGGTGTGGCAAGgtatgtgtattcttact
tggtgtaggatgtacgcgccagagttgtagagacggcaagccatgtgagt
aaacccttgagctgcaaactcctttccaaaccgtcacacctttattactc
ttctcattttttccccttacaaaacaatcttttcagCCCTACCCACGCTG
GGCCTACGGTCTTCGGTTCAACGACGGGCTCATCCAAATTCCTCTGCCTG
GCCTTGCTAAACCAGCCGACGTCTTCCTCCGCGTCGTCGGGGACGAAAAC
AAAGAGAAACAAAAACACGTGGCCCCTCTCATTGTTTTCCCCGGTGGTCC
TGGCCTTGCTCATGACTACACTGAGACGCTCGAAGCCCTCGTGTATGCCG
ATCGGCGTGTCATCGCTTTTGATCCGGTTGGGACGGGACAATCCTCTCCT
ATCCTCCCTCCCTCCCTCCTCCCCTCCTCTGGCACAACGGAGGAGGAGCG
AGAGCAAATTTGGAGCGAGTTGATTCAAATTCAAGTCAAAGAGATCATCA
GATTCTTGGAGATAGAAGGAGAGCACCACGTTTGGGCACACGGTGCGGGC
TGCCTCCCCGCCATACAGTACACGTCCTCCCTCCCTCCCTCGTCCTCGTC
CTCGTTATTTGTCAAGTCACTGACGCTTGCTAGCCCCTTTGTCTTCTCTC
CGGGTAAGACGAGTTTGCCTTCCTGGTACTCCGCCAATGACGCGGCGGTT
CCTCTTTGTGTGACAGAATCGGTTGCGGGGGGAGGAGGGAAGGAGGGCGC
GAAGGAGCAAAGGGTATTTTACAACAAGAGGCTGGAGGGGCTGCCGGCAT
TGGCAGAGCTGGGAGGAGGGGGGGGGTTCCGGTGTTTGTGAGTTACAGTG
CGGGAGAGGATGGAGCCCTAGGGTTGGACGAAGCGGCAGTGGGGAGGTTG
AGGAAACGTATCGAGGAGGGAGGGAAGGAGGGAAGGAGGGCGAGGGTGGT
GGTGAAGGCATTTGAGGGGCGGGTGCCGCACATTGATCAGCCGGAGCAGT
ACGTGGATgtaagtcgagagagggagggagggagaaagggagggagggag
ggagggagggagggattgaaaaatcaacagagagaccgattgtgtcttat
ttcttttccctcatgaggatacgcgcttgtatacacatatttacacacac
gtatgcacacacactcacgtatacatgcatatacctcgttgtacagTGGC
TGGATGAAATGATGCAAATTGTCGAGAAGCCATCCACGCCCGCAGCATGA
GCGAAGGAAGACAAGAAGTGAAGGGGGTAGGGAGAGAGGAAAGTGGGGAA
GGGGGGAGGATGGAGCAAGAATGTGGCACACGAAAAAAAGTACAATACAT
AAGACAGGGAATAAAATGGTGGTGTTATTTAAATAAAATTAGATCTTGCG
TGCTTTTGCTGTGCTTTTTCATTTCCCTCTTTTCTCTCCGTCCCTCGCCC
TTCTCACCTAAATGTGTGGGTGTGTATGGCGAGCGCGCGTCCACCCCCAC
AGGCCATTTTCTAACATGTCTTCAATTTAAGTATGTGCCCGTCTCCCCTC
CTCTCCCATCATTCCTTGCCGTCTGTTGCAGACTGCTTTCCGCTCATCGT
GGTTGATGGAACCCTCTACCCGAGCCACACGGTCGGCATCCTTCCTATTC
GCCTATTCCTCATCATTACTCATTACCGCCCATCTTCCTCCATTCCTCCT
TCATGCCATCCTTTTCCCTTCCTTCATCCTCTTTTTTCTCTCCTTCTCCG
CCCGGGTAGCCGCAGCCAGCCCCGCGCCCTCCTTCTCGAACCTCGTCACG
TTCTTAAACCAATAATTCACTGCCACATTCAACCCCCCCCCCTCATCTGC
GACACTCTTCACCTCGTGGTGCCAGTACGCAGGTAGGTACAAGCATTCCC
CCTCCTTTAAACTCACCCGGTAAGGCGTGGCTTTCACCACTTCCGGGTGT
CTTGTCAGATCCGGATCCTCCAACAACACCGACGACCCAAATACCACCTT
GCTCAATCCCTCCTTCACAGGCATTCGCTCGAACGTATCTGGGTACACGT
ACTTCAGCTCCCCTTTCACCCGCGTAGAGTAGTAGAGGTAGAAAATGTCC
ATGGGTGGGAACAGCGTCAACTCTTTTCTCCCCGCCAGCTGACACAAGAT
GTTTTCATAATCGTCGTAGTGCAGCGGGCTCGTCGTTCCGCCCTTCCCCA
CCCACAGGTTAGTGAGCAACAGCTCCAGCCCCCCTTCTTCGCCGGCAGCC
CCGGCAGCAACCGCAGCAGCGGCGGGGGAGGGAGGGGGAGGGAGGGAAGG
AGGGCGGGGCCCAGGTATTGGGTGAGGGAGAGATATTCCAGATAAAACGT
GGCGTTGGGCGCGAGGGAGGGGTTGGCTTGGGACAGTCGGAGGAGGGATA
GGAAGTCGTCCATTCGCATTGAGGTCTGAGGAGGCCGGACCAGCACCTCC
TCCACCTCGTCTTCCCCCCCCCCCC
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protein sequence of NO15G00680.1

>NO15G00680.1-protein ID=NO15G00680.1-protein|Name=NO15G00680.1|organism=Nannochloropsis oceanica|type=polypeptide|length=325bp
MAARPLFRHLSLPALRNLLLLLFLYLLASVNAFLIPFASPSCRTPLVLRA
TSFSDHQHSRKDLLVQAGSLLFGASMLGSAARPAQAWCGKPYPRWAYGLR
FNDGLIQIPLPGLAKPADVFLRVVGDENKEKQKHVAPLIVFPGGPGLAHD
YTETLEALVYADRRVIAFDPVGTGQSSPILPPSLLPSSGTTEEEREQIWS
ELIQIQVKEIIRFLEIEGEHHVWAHGAGCLPAIQYTSSLPPSSSSSLFVK
SLTLASPFVFSPGKTSLPSWYSANDAAVPLCVTESVAGGGGKEGAKEQRV
FYNKRLEGLPALAELGGGGGFRCL*
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Synonyms
Publications