NO15G00570, NO15G00570 (gene) Nannochloropsis oceanica

Overview
NameNO15G00570
Unique NameNO15G00570
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2950
Alignment locationchr15:180921..183870 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:180921..183870 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
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BLAST of NO15G00570 vs. NCBI_GenBank
Match: EWM23539.1 (hypothetical protein Naga_101044g1 [Nannochloropsis gaditana])

HSP 1 Score: 238.0 bits (606), Expect = 1.200e-58
Identity = 195/578 (33.74%), Postives = 250/578 (43.25%), Query Frame = 0 
Query:  410 WARYQLAREAFLLGYFPLAHHLLLPFLLPSLPPSSERVHLWLQALATISKAE---GIWAASFSXXXXXXXXXXXXXXXDRETLEMTVVRPSLHRALLLLQ------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLALLQSLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGQQTRWTLRVLMGLLGLLEKAFRRLILGKRE---------------GGREGRKNPHWPVGIAAFPPSLPLLQVCLLLEQHLDQATCPPALPPSLSVALRLMTHMELTLSQVPWPYPRRFACPSSLPPWSLQMYVVPLGPVE----------VGEAGSREGGREEGDGMMQRPVDVWDGNGQEEDGEKEDGREGGAEVEVGYGREVKVSVMGVLRDVSREERRRLVQVRILATI--LKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPLDQDDGTFPACILQIPPGTFPKPGVYRLLLEGSVVDSGGRAWTMTPEGGAGRVMVKVWCGV 952
            WARYQLAREA LLGYFPLAH LLLPFL PSL  SSER   WL ALA+ISKAE   G  AAS     XXXXXXXXXXXX+R+  +  VVRP+L  ALLLLQ                                         R+  LL  LP                                              Q+RW LR++MG++  LE+ +R L++G++E                     KNPHWP G      S P+L  C  LE+  +Q               R M  +EL+L+Q+PWPYPRRF  P SLPPWSL MYV P+ P +                   G E  +G  +    +W+  G EE+ E    R+    VEV YG E++++V+G+LR V    R  L  VR+L ++  +++G                                                                                 SPLD++DGTFPAC+L +P G  P+ G+Y LLLEG V+D+GGRAWTMTPEGG G+  + + CGV
Sbjct:   97 WARYQLAREALLLGYFPLAHRLLLPFLPPSLSLSSERTQEWLGALASISKAETLFGASAASCLPPSXXXXXXXXXXXXERDVCDEDVVRPTLRHALLLLQHLERLPSSPSSFPFSFPSFPRRYLLARLHFLSLLTFLRTLLRERYLLPPLP--------PYHLHSRADRYHSRFPRACQRLEGRMWRLYREEGGGDPQSRWCLRIVMGMVRFLERVYRVLVMGEKEXXXXXXXXXXXXXXXXXXXXXKNPHWPSGNLPSAASCPMLHACRHLEKQFEQIALXXXXXXXXXXXXRHMAQIELSLAQIPWPYPRRFLYPRSLPPWSLDMYVFPVDPEDXXXXXXXXXXXXXXXXXXXGIEWPEGRGR----IWEAGGGEEEVE---WRKDNDRVEVEYGEEIRLAVVGILRHVPPGARGGLATVRVLVSVTDVEDG---------------------------AVGEGEGGEGDVDKGSTQGMTQGQPDPPRRYTAPCLSQPRPQTGERFCFRALLTSPLDKEDGTFPACVLTLPRGVLPRRGMYTLLLEGRVLDAGGRAWTMTPEGGGGKRKISLICGV 632
The following BLAST results are available for this feature:
BLAST of NO15G00570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM23539.11.200e-5833.74hypothetical protein Naga_101044g1 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL148nonsL148Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR040ngnoR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK001561NSK001561Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00570.1NO15G00570.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_101044g1gene6913Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00570.1NO15G00570.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00570 ID=NO15G00570|Name=NO15G00570|organism=Nannochloropsis oceanica|type=gene|length=2950bp
ATGCGGCTGCTGAGCTCTCCTCCTGTGTATGACGGTCTTACAAAGGCAAG
CTACCTCCACCTTCTCGCCGCCCTTGCCCTCTCTTCCTCCTCCTCCTCCA
CTTTCTCCCCCTCTTCCTCCTCCTCCATTGCTTATGCCGTCCTGCGAGTC
CTCTCGAACGACGAGCTTCTTTTCTGGCTTTCGGTCCCTCCCTCCACCCC
GCCGTCCCTCCCTCCCTCCATCCAAGCGCAGGTCCAGAATGAGGACTCAA
AGGGAGGAATAAAGGGGATGAGGGAAGGATGGCGCCTGGCCGCATCGAGG
AAGGAGGAAGCGCGTGTATATTTTGCATGGGCAGAGGCATTTACCACCAC
ACTCAGGAAAGTCAAAAGCGAGGGAGGGAGGGAGAGAGGGGACGAGGAGC
AAGGGAAGGCCACGAGGATCCTGGACGTGTTTTTGAAGGACGTACTCTTC
CCAAGGGTGAGGACACTGCTTCTAGGGAAGGAGGAGGGTGAAGAGGAGGG
AGAGGAGGAGAAGGAGGAGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGG
AGGAGGAGATCGCTTGTCTGTTGTCGGCGGTGCTGGCGGCGGCTAGCGCG
GAGGAGCAAGCGCCCTTCCATTCAACCCTTCTCTTTACCATGACCCTCCT
CGGAAACCTCCGGAAGGACGCCCCTTCCCTCCCTCCCTCCTCCTCCCTCC
CTGCCTCCTTCCTCCTCCTCAAGCTTCTCTCGGCGCTTGCTACCCTCGAT
CGATGGGACATCATGTCCTCCCTCCTTTCCTCCTCCTCCTCCTCCTCCTC
CTCTTCCTCCTCCCTCCTTGCACGCTCCCCCCTCGGCGTCCTTCTCTTCC
CTCCCTCCCTCCCTGCGGCGAGAATAGAGGAGAAGATGGAGGACGGGGGG
ACGGAAGGGAGGGAGGAAGGGGAGGAGGTAGCGGCGTTGGTGGCAGCCAT
GCGTATCTGTCGAGGCACGGCGAGGGACCAAGAACTCCTGCTCCACGCCC
TCCTTCCCTCCCTCCCTCCCTTCGTGGAAGAGGAAGAAGCAAAGGGCAGA
AAGGAGGAAGCCAAGAGGCCAAGGACGGAAAAAGAGGTCAAGAGTGCGAT
GGAGGTAGAGACAGAAAGTAGCAGCAGCAGCAGCAGCAGCAGCAGCAGTA
GCAGGCATCTAAAAGTAGCTTTGCTACATCCCTACACCTCTCGCTCCCTC
CCTCCCTCCCTCCCTTCCTCCTCCGGCTGGGCTCGTTATCAGCTGGCACG
TGAAGCCTTCCTCCTCGGTTACTTCCCCCTCGCCCACCACCTCCTCCTCC
CCTTCCTCCTCCCGTCCCTCCCCCCCTCCTCCGAGCGCGTCCATCTCTGG
CTCCAAGCGCTGGCCACCATTAGCAAAGCGGAGGGGATATGGGCTGCGTC
CTTCTCCTCCACCTCCTCCTCGTCCTCCCTCCCCCCCTCCCTCCCTCCCT
CCGACCGCGAGACCCTCGAAATGACCGTCGTCAGGCCCTCCCTCCATCGC
GCCCTCCTCCTCCTCCAGCAACTCGAGCATCCATCCTCCCCCTCCTTCCC
TTCCTTTCCCCGCCGCTTCCTCCTTGCCCGTCTGTCCTGTCTCTCGCTCC
TCTCCTTCCTCCGAACCCTCCTCCGAGACCTCGCCCTTCTTCAATCCCTC
CCCCCCTCCCTCCCCATCACGCGCCCTCACTACTATGCTCACAGATTCCC
AGCGGCCTGCCAAAGGCTCGAAAGGCGACTGTGGCGATTGTTTAGAGAGG
AGGGAGGAAGGGAGGGAGGGAGGGAAGGAGGGGGAGGGCAGCAGACACGA
TGGACATTAAGGGTGCTGATGGGCTTGCTGGGGTTGTTGGAAAAAGCCTT
TCGACGACTGATTCTGGGGAAGAGGGAGGGAGGGAGGGAGGGAAGGAAGA
ATCCTCATTGGCCTGTGGGTATAGCCGCCTTCCCTCCCTCCCTCCCCCTC
CTTCAAGTCTGCCTCCTCCTCGAGCAGCATCTCGACCAGGCCACTTGCCC
GCCCGCTCTCCCTCCGTCCCTATCCGTCGCCCTTCGCCTCATGACCCATA
TGGAATTAACCTTGAGCCAGGTGCCGTGGCCGTACCCCAGGCGTTTCGCC
TGCCCTTCCTCCCTCCCGCCATGGTCCCTCCAAATGTATGTCGTGCCATT
GGGGCCGGTGGAGGTAGGGGAGGCGGGAAGCAGAGAGGGAGGGAGGGAAG
AAGGGGATGGAATGATGCAACGGCCAGTGGATGTGTGGGATGGCAATGGA
CAGGAGGAGGATGGAGAGAAGGAGGACGGTAGGGAGGGAGGGGCTGAGGT
GGAGGTAGGCTATGGGAGGGAGGTAAAAGTGTCGGTGATGGGAGTGTTAA
GGGATGTGAGCAGGGAGGAGAGGAGGAGATTAGTGCAAGTGAGAATCTTG
GCTACTATTCTTAAGGAAGGGGGAAGGGGGAAAGGGGGTGGGGACGAGGT
GGAGGGGGAGGAGGAGGAGGAGGAGATGGTGGTGGAGGGAGCCTCGCCTC
GTCGACAACGAGTGTCTGGGCGATTGCAGCAGCAGCAGCAACAACGAGGA
CCAACACAGCAGATATCTACATCTTGTTCTATTCCATCTCTCCAACGTCA
GCAGCAGCGGCAGCAACAACAGCAACGGCAGCAGCAGCACTACTACCACC
GCGCCCTCCTCACCAGCCCTCTAGACCAAGACGACGGAACTTTCCCCGCG
TGCATCCTTCAAATTCCTCCAGGGACTTTCCCAAAGCCGGGCGTGTACAG
GTTATTGTTAGAGGGATCGGTGGTGGATTCAGGGGGAAGGGCATGGACGA
TGACTCCGGAGGGAGGGGCGGGGAGGGTGATGGTGAAGGTGTGGTGTGGA
GTAAGGCGGCGACAGGGTAGGCTTCGGATGTAAAAACGGAGGAGAAAAAG
AAAGAAACAAGTATCGAACATCAAGCAGCAAACATTAATGTCGTGTCTTA
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protein sequence of NO15G00570.1

>NO15G00570.1-protein ID=NO15G00570.1-protein|Name=NO15G00570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=961bp
MRLLSSPPVYDGLTKASYLHLLAALALSSSSSSTFSPSSSSSIAYAVLRV
LSNDELLFWLSVPPSTPPSLPPSIQAQVQNEDSKGGIKGMREGWRLAASR
KEEARVYFAWAEAFTTTLRKVKSEGGRERGDEEQGKATRILDVFLKDVLF
PRVRTLLLGKEEGEEEGEEEKEEEEEEEEEEEEEEEIACLLSAVLAAASA
EEQAPFHSTLLFTMTLLGNLRKDAPSLPPSSSLPASFLLLKLLSALATLD
RWDIMSSLLSSSSSSSSSSSSLLARSPLGVLLFPPSLPAARIEEKMEDGG
TEGREEGEEVAALVAAMRICRGTARDQELLLHALLPSLPPFVEEEEAKGR
KEEAKRPRTEKEVKSAMEVETESSSSSSSSSSSSRHLKVALLHPYTSRSL
PPSLPSSSGWARYQLAREAFLLGYFPLAHHLLLPFLLPSLPPSSERVHLW
LQALATISKAEGIWAASFSSTSSSSSLPPSLPPSDRETLEMTVVRPSLHR
ALLLLQQLEHPSSPSFPSFPRRFLLARLSCLSLLSFLRTLLRDLALLQSL
PPSLPITRPHYYAHRFPAACQRLERRLWRLFREEGGREGGREGGGGQQTR
WTLRVLMGLLGLLEKAFRRLILGKREGGREGRKNPHWPVGIAAFPPSLPL
LQVCLLLEQHLDQATCPPALPPSLSVALRLMTHMELTLSQVPWPYPRRFA
CPSSLPPWSLQMYVVPLGPVEVGEAGSREGGREEGDGMMQRPVDVWDGNG
QEEDGEKEDGREGGAEVEVGYGREVKVSVMGVLRDVSREERRRLVQVRIL
ATILKEGGRGKGGGDEVEGEEEEEEMVVEGASPRRQRVSGRLQQQQQQRG
PTQQISTSCSIPSLQRQQQRQQQQQRQQQHYYHRALLTSPLDQDDGTFPA
CILQIPPGTFPKPGVYRLLLEGSVVDSGGRAWTMTPEGGAGRVMVKVWCG
VRRRQGRLRM*
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Synonyms
Publications