NO15G00490, NO15G00490 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00490 vs. NCBI_GenBank
Match: EWM23535.1 (hypothetical protein Naga_100416g5 [Nannochloropsis gaditana]) HSP 1 Score: 320.9 bits (821), Expect = 5.000e-84 Identity = 164/298 (55.03%), Postives = 193/298 (64.77%), Query Frame = 0
Query: 68 RPPKAEIDYASALPDEMLVRILLFLDIDSGVTSTLTSTRWRPLFTERVCQAHCERVYLDQSRTKRLNPARFNGSWKKMLFTRPRVRTNGLYFLLSSYIKKPMKDMWTEITPGSILEVKYYRYLRFLPNGRLVYALLYLPPSEAVRLFKDWGSAH-----------PSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEGVYWTHKKEIYCQIRTSYSLINFRLEIGER-------GAGREGGRGGKFTELAMEEHSSVPYNDPTATPVAHKPAYAPFMFHRVSMW 348
R PK EIDYASA+PDE+L RIL F+DID+GV ST++S RWRPLF ER+CQAHCER+YLDQ+ KRLNPARF GSWK ML TRPRVRTNG YFLLSSYIKKP+KDMWTEITPG+ILEV+YYRYLRFLP GRLVYALLYLPP EAV LFK++ AH SS L+EG++W HK + C+I+T YS I+F+ +I R G FT L MEEH+SV ND T TP+ HKPAYAP +F++V +W
Sbjct: 60 RAPKGEIDYASAMPDEVLHRILTFVDIDTGVASTMSSQRWRPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNGFYFLLSSYIKKPIKDMWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKEY-EAHVSNLPPSTLTSTSSSSALRGWGPPRRDRIRENGRTASINTTGNPPISANSKKKELNEGLFWIHKGAVICEIQTPYSRIHFQFKISAREGXXXXXXXXXXXXXXGNFTALMMEEHTSVALNDSTGTPIPHKPAYAPLLFYKVPVW 356
BLAST of NO15G00490 vs. NCBI_GenBank
Match: XP_005853565.1 (hypothetical protein NGA_0494800 [Nannochloropsis gaditana CCMP526] >EKU22793.1 hypothetical protein NGA_0494800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 264.6 bits (675), Expect = 4.300e-67 Identity = 138/264 (52.27%), Postives = 163/264 (61.74%), Query Frame = 0
Query: 102 LTSTRWRPLFTERVCQAHCERVYLDQSRTKRLNPARFNGSWKKMLFTRPRVRTNGLYFLLSSYIKKPMKDMWTEITPGSILEVKYYRYLRFLPNGRLVYALLYLPPSEAVRLFKDWGSAH-----------PSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEGVYWTHKKEIYCQIRTSYSLINFRLEIGER-------GAGREGGRGGKFTELAMEEHSSVPYNDPTATPVAHKPAYAPFMFHRVSMW 348
++S RWRPLF ER+CQAHCER+YLDQ+ KRLNPARF GSWK ML TRPRVRTNG YFLLSSYIKKP+K MWTEITPG+ILEV+YYRYLRFLP GRLVYALLYLPP EAV LFK++ AH SS L+EG++W HK + C+I+T YS I+F+ +I R G FT L MEEH+SV ND T TP+ HKPAYAP +F++V +W
Sbjct: 1 MSSQRWRPLFDERICQAHCERIYLDQAHVKRLNPARFQGSWKAMLQTRPRVRTNGFYFLLSSYIKKPIK-MWTEITPGTILEVRYYRYLRFLPGGRLVYALLYLPPPEAVSLFKEY-EAHVSNLPPSTLTSTSSSSALRGWGPPRRDRIRENGRTASINTTGNPPISANSKKKELNEGLFWIHKGAVICEIQTPYSRIHFQFKISAREGXXXXXXXXXXXXXXGNFTALMMEEHTSVALNDSTGTPIPHKPAYAPLLFYKVPVW 262
BLAST of NO15G00490 vs. NCBI_GenBank
Match: CBN79375.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 122.9 bits (307), Expect = 2.000e-24 Identity = 63/142 (44.37%), Postives = 86/142 (60.56%), Query Frame = 0
Query: 75 DYASALPDEMLVRILLFLDIDSGVTSTLTSTRWRPLFTERVCQAHCERVYLDQSRTKRLNPARFNGSWKKMLFTRPRVRTNGLYFLLSSYIKKPMKDMWTEITPGSILEVKYYRYLRFLPNGRLVYALLYLPPSEAVRLFKD 217
D +PD++L R +LFL+ + S+RW E V + C R YL QS K LN R+ SW++M RPR+R GLY L ++Y KKP++DM TE TPG IL V YYRY +F +GR+ YAL + PP + VR+ +D
Sbjct: 294 DIVLTMPDDILHRTMLFLNPEDIFECRAVSSRWSFPGHENVYEGLCRRTYLAQSAKKMLNVKRWR-SWQRMFKFRPRLRDTGLYSLKTTYFKKPVRDMSTEWTPGKILRVTYYRYFKFFGDGRVAYALTHEPPKDFVRMLQD 434
BLAST of NO15G00490 vs. NCBI_GenBank
Match: EJK58371.1 (hypothetical protein THAOC_21510 [Thalassiosira oceanica]) HSP 1 Score: 115.2 bits (287), Expect = 4.200e-22 Identity = 63/147 (42.86%), Postives = 87/147 (59.18%), Query Frame = 0
Query: 80 LPDEMLVRILLFLDIDSGVTSTLTSTRWRPLF-TERVCQAHCERVYLDQSRTKRLNPARFNGSWKKMLFTRPRVRT-NGLYFLLSSYIKKPMKDMWTEITPGSILEVKYYRYLRFLPNGRLVYALLYLPPSEAV-----RLFKDWGS 220
+PDE+L + +L +D+ L S W+ ++ V + CERVYL QS+ K LN A+F S+++ML RPRVRT GLY L + + +DMWTEI G++LE YYRYL F +GR++YAL + P E V L WGS
Sbjct: 237 IPDEILEKCFAYLPVDNFANLALVSPHWKRFTRSDAVYKTLCERVYLIQSKRKALNVAKFGNSYRRMLEVRPRVRTGGGLYVLKYQKVIQIQRDMWTEIPVGAVLESIYYRYLYFFEDGRVLYALTHATPGEMVPRFHKMLLHGWGS 383
BLAST of NO15G00490 vs. NCBI_GenBank
Match: XP_002296077.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >ACI64794.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 114.4 bits (285), Expect = 7.100e-22 Identity = 62/137 (45.26%), Postives = 85/137 (62.04%), Query Frame = 0
Query: 80 LPDEMLVRILLFLDIDSGVTSTLTSTRW-RPLFTERVCQAHCERVYLDQSRTKRLNPARFNGSWKKMLFTRPRVRT-NGLYFLLSSYIKKPMKDMWTEITPGSILEVKYYRYLRFLPNGRLVYALLYLPPSEAVRLF 215
LPDE+L + FL +D L S W R E + + CERVYL+QS+ K L+ +RF S+++ML +RPR+RT GLY L ++K +DMWTEI G+ILE YYRYL F +GR++YAL + P E + F
Sbjct: 240 LPDEILHKCFSFLPVDDYSPLALVSPHWSRFTRCESLYKTLCERVYLNQSKRKTLHVSRFGNSYRRMLESRPRIRTGGGLYVLKYQEVRKIQRDMWTEIPVGAILESVYYRYLYFFEDGRVMYALTHATPVEMIPRF 376
BLAST of NO15G00490 vs. NCBI_GenBank
Match: XP_002178467.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50132.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 112.8 bits (281), Expect = 2.100e-21 Identity = 59/137 (43.07%), Postives = 87/137 (63.50%), Query Frame = 0
Query: 80 LPDEMLVRILLFLDIDSGVTSTLTSTRWRPLF-TERVCQAHCERVYLDQSRTKRLNPARFNGSWKKMLFTRPRVRT-NGLYFLLSSYIKKPMKDMWTEITPGSILEVKYYRYLRFLPNGRLVYALLYLPPSEAVRLF 215
+PD++L ++ +L +D+ T +L S W+ TE V + CER+YL+QS+ + L+ +RF S++ ML RPRVR G+Y L + +KK +DMWTEI G++LE YYRYL F +GR++YAL P E R F
Sbjct: 153 IPDDILHKVFEWLPVDAYGTLSLVSPHWKAFTRTEAVYKRLCERLYLNQSKRRALHVSRFGNSYRAMLELRPRVRAGGGIYVLKFARVKKIQRDMWTEIPVGAVLETVYYRYLYFQEDGRVLYALTAASPHEMFRRF 289
BLAST of NO15G00490 vs. NCBI_GenBank
Match: OEU20755.1 (hypothetical protein FRACYDRAFT_259673 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 112.5 bits (280), Expect = 2.700e-21 Identity = 61/134 (45.52%), Postives = 86/134 (64.18%), Query Frame = 0
Query: 81 PDEMLVRILLFLDIDSGVTSTLTSTRWRPLF-TERVCQAHCERVYLDQSRTKRLNPARFNGSWKKMLFTRPRVR-TNGLYFLLSSYIKKPMKDMWTEITPGSILEVKYYRYLRFLPNGRLVYALLYLPPSEAVR 213
P E+L RI +L +D+ T L ST W+ TE V + CER+YL+QS+ ++L+ RF+GS+++ML RPRVR G Y + S IKK + MWTEI G++L +YYRYL F +GR++YAL PP + R
Sbjct: 82 PAEILHRIFSWLPVDTYGTMALVSTHWKFFTRTEAVYKRLCERLYLNQSKRRQLHVNRFDGSYRRMLEIRPRVRAAGGCYVMKYSQIKKIERTMWTEIPIGAVLRTEYYRYLYFQEDGRVLYALSCSPPKDMFR 215
BLAST of NO15G00490 vs. NCBI_GenBank
Match: CCA14313.1 (Fbox protein putative [Albugo laibachii Nc14]) HSP 1 Score: 112.1 bits (279), Expect = 3.500e-21 Identity = 79/270 (29.26%), Postives = 119/270 (44.07%), Query Frame = 0
Query: 80 LPDEMLVRILLFLDIDSGVTSTLTSTRWRPLFT-ERVCQAHCERVYLDQSRTKRLNPARFN----GSWKKMLFTRPRVRTNGLYFLLSSYIKKPMKDMWT-EITPGSILEVKYYRYLRFLPNGRLVYALLYLPPSEAVRLFKDWGSAHPSSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSEGVYWTHKKEIYCQIRTSYSLINFRLEIGERGAGREGGRGGKFTELAMEEHSSVPYNDPTATPVAHKPAYAPFMFHR 344
LP+ ++ +++LFLD D+ + T W + E + + C R++ Q + K N +F +W +ML RP VR NG Y+L SY KKP +MWT E+TPGS+L+V YYRY F +G L+YA+L+ PP EA+ +FK G G + + + + T S+++FRL+IG +G GR L + EH S D + V F F+R
Sbjct: 5 LPEHLVTQLVLFLDEDTIGSCLCTCKHWNHVLNDETIFKELCRRIFPIQCK-KSANQKQFQLRRCKTWFEMLCRRPHVRYNGFYWLRISYYKKPEWNMWTPEVTPGSVLQVVYYRYFYFQRDGTLLYAMLFKPPKEAISIFKRRG--------------------------------------------IKTHRGTFHVERNHVLITVNTPDSVVDFRLQIGTKGRGRN-------VSLKLLEHYSFSEPDRSGWIVNFDTNGEIFRFYR 222
BLAST of NO15G00490 vs. NCBI_GenBank
Match: GAX25789.1 (hypothetical protein FisN_8Hh308 [Fistulifera solaris]) HSP 1 Score: 110.9 bits (276), Expect = 7.900e-21 Identity = 59/132 (44.70%), Postives = 81/132 (61.36%), Query Frame = 0
Query: 80 LPDEMLVRILLFLDIDSGVTSTLTSTRWRPLF-TERVCQAHCERVYLDQSRTKRLNPARFNGSWKKMLFTRPRVRT-NGLYFLLSSYIKKPMKDMWTEITPGSILEVKYYRYLRFLPNGRLVYALLYLPPSE 210
LPD++L R+ FL +D+ T L S W+ TE + CER+YL QS+ + L+ +RF S++ ML RPRVR G+Y + IKK +DMWTEI G+ILE YYRYL F +GR++YAL P +
Sbjct: 136 LPDDLLHRVFDFLPVDTYATLALVSPHWKSFTRTEAAYRRLCERLYLQQSKKRTLHVSRFGNSYRTMLEKRPRVRAGGGVYVIKYKQIKKIQRDMWTEIPHGAILESIYYRYLYFQEDGRVIYALTTTAPHD 267
BLAST of NO15G00490 vs. NCBI_GenBank
Match: GAX15396.1 (hypothetical protein FisN_8Lh308 [Fistulifera solaris]) HSP 1 Score: 110.9 bits (276), Expect = 7.900e-21 Identity = 59/132 (44.70%), Postives = 81/132 (61.36%), Query Frame = 0
Query: 80 LPDEMLVRILLFLDIDSGVTSTLTSTRWRPLF-TERVCQAHCERVYLDQSRTKRLNPARFNGSWKKMLFTRPRVRT-NGLYFLLSSYIKKPMKDMWTEITPGSILEVKYYRYLRFLPNGRLVYALLYLPPSE 210
LPD++L R+ FL +D+ T L S W+ TE + CER+YL QS+ + L+ +RF S++ ML RPRVR G+Y + IKK +DMWTEI G+ILE YYRYL F +GR++YAL P +
Sbjct: 111 LPDDLLHRVFDFLPVDTYATLALVSPHWKSFTRTEAAYRRLCERLYLQQSKKRTLHVSRFGNSYRTMLEKRPRVRAGGGVYVIKYKQIKKIQRDMWTEIPHGAILESIYYRYLYFQEDGRVIYALTTTAPHD 242 The following BLAST results are available for this feature:
BLAST of NO15G00490 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00490 ID=NO15G00490|Name=NO15G00490|organism=Nannochloropsis oceanica|type=gene|length=3366bpback to top protein sequence of NO15G00490.1 >NO15G00490.1-protein ID=NO15G00490.1-protein|Name=NO15G00490.1|organism=Nannochloropsis oceanica|type=polypeptide|length=348bpback to top Synonyms
Publications
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