NO15G00440, NO15G00440 (gene) Nannochloropsis oceanica

Overview
NameNO15G00440
Unique NameNO15G00440
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2040
Alignment locationchr15:151557..153596 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr15genomechr15:151557..153596 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO15G00440 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL145nonsL145Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR006ncniR006Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR040ngnoR040Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO15G00440.1NO15G00440.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO15G00440.2NO15G00440.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO15G00440.1NO15G00440.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO15G00440.2NO15G00440.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO15G00440 ID=NO15G00440|Name=NO15G00440|organism=Nannochloropsis oceanica|type=gene|length=2040bp
GTTTCCTCGAGGTCTAGCAGCCTTTCATGCATCGTACCATTTAGTGCGCA
GCGCATCAAAGGGACTTCATGGTATATTGCCTTGACTGGTGCTTCACAGC
GTAGGCTATGGGCGCTTGAGTGACTGGTGGGGGAGCGAAATAAACACTCA
TCATTTTCTTCTTTCTTCCCCGTCCTTCCCACTCATGCACAGACATGTCA
ACAACACAAGCAAGCGACAATTCCTGTCAACCTGGGAGCAACCTTGTCAA
CGAGGGGCAAGAGTTTGACTCAGACTCAGACTCTGACCCTGGCACCAATT
CCCCGGACGCGGACACGAATGGCTCGAGTGACCAGGCAGCACCCCTGGTC
CATGGGGACCACGGGGCGGGGGTGGGGAAGAAACGCGCCACCAGGAAGCA
GACCACCAAAGCTTCCCCATTCCAAAAATTCCACTCCAACCCTTACATCT
TCGCCCTGTTTTTATATCTGAgtaagtgatgatgtggctgtgtgagtgac
atgtctgtgcatttgtgtttccattcttaactcacacaactaccccacca
catcctcagTGGTGGATGGTCCCATTGACCTCACAGATGAAACCTTCGAG
CATGGCCGAGTGGATTGGTTTTCACCCTTTGATCTAAACGGCCGGCGCAA
CATCGCCCTCCTCAAGTCCTGTGTCCAAAGACTACAGGCCCTAATCAAAA
AACACTACCCTGCTTTTGTGCCTGCCTTCGCTGGGTTCACGGCGGACAAA
Tgtaagacctacactgaccaaatgtgggtgaagagaagcgtctgtaagag
ggacgatggaaaaattgtacggctatgacagaacacaaattacgaaatgg
accaactacatgctagagtacgtgttcgatcaatgggccttccttctgga
cttaaacgaggaacgtttgcccaacaatgcacagtactcgttcatcttgt
ttgacaaacgttcctcgtttaagtccagaaggaaggcccattgatcgaac
acgtactctagcatgtagttggtccatttcgtaatttgtgttctgtcata
gccgtacaatttttccatcgtccctcttacagagtgaggatgagcattgc
ggccaagaagcatcacaaagaccattcctccacacatttttggcattcta
tccatgttgttagGCGGGTGATGAGGTAAATGGTAGGAGAGCGGGAGAGA
AAGTTATGGGTCAAGAACCACAGCGTGAGCCATTGGGAAGAGTAGTACGT
GTAAGATAGTCAATATTGGCCATGAGTGCTTACCCTTCCAACTCGATAAC
TGTTTCGATGCGGAGTCTGGGGGGCATGTACCACACTTGTTCCTTGGTAA
ACCGGTGCATTTTCAGGAATAAATCATCGGTAAAGTCTTCGAAGAGCTGC
GGCAATGTACGAGGGCGGTTTGGATCGAGATACCAAGACGTACGGGGAAA
CTGGTTGCCGCCAATGACGTACATGTGCATGAAGAGTAAGCAGAGTACGA
GGTTGTTGTCATATTCCACATACATCATGTGTTGGTCCATGTTGCGCAAA
CCAGCCCCACTCTGCCTTCGCAGACACTTCTTCAAGACAACGCTGTGTAT
GTAAAAGTTGTTGTGGCTATGTATAGACTTGCTATCACTATTTAAGACTT
GCTTTCGCTATTTACGGGTGCTTCGCTATTTAGAGCATATCCGGCCGGTT
GAACACACACCTGGGCCAACAGTTAAATAGAGCTCTTAAATAATTATTTA
AGAGTGGCTGCTATTTACGGGTGCGGAGTTGAACACACCCCCTAATGGAC
GGTGTACAATCCACACGGCATGGACGTGATCTTTGTGAAGCGTCCTGAAC
ATTTGTGCGGAAGCGTTTTCGTTTTCTTATGTTTGTAGGGCGGGTGATTT
GAGTTTGAAGAGAAGAAATGTAGGATGAAAAGCCACAGAGAGAGCGAAAA
GCGGTCGCAGCCGTTTTGCCAGTCATACAGTATCTGCAGAATCTGGGAGA
GGGGGTTCAGGTGGAATGAGTTCTGGGGTTTATACTGAGG
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protein sequence of NO15G00440.1

>NO15G00440.1-protein ID=NO15G00440.1-protein|Name=NO15G00440.1|organism=Nannochloropsis oceanica|type=polypeptide|length=159bp
MSTTQASDNSCQPGSNLVNEGQEFDSDSDSDPGTNSPDADTNGSSDQAAP
LVHGDHGAGVGKKRATRKQTTKASPFQKFHSNPYIFALFLYLMVDGPIDL
TDETFEHGRVDWFSPFDLNGRRNIALLKSCVQRLQALIKKHYPAFVPAFA
GFTADKCG*
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protein sequence of NO15G00440.2

>NO15G00440.2-protein ID=NO15G00440.2-protein|Name=NO15G00440.2|organism=Nannochloropsis oceanica|type=polypeptide|length=182bp
MSTTQASDNSCQPGSNLVNEGQEFDSDSDSDPGTNSPDADTNGSSDQAAP
LVHGDHGAGVGKKRATRKQTTKASPFQKFHSNPYIFALFLYLMVDGPIDL
TDETFEHGRVDWFSPFDLNGRRNIALLKSCVQRLQALIKKHYPAFVPAFA
GFTADKCKTYTDQMWVKRSVCKRDDGKIVRL*
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Synonyms
Publications