NO15G00420, NO15G00420 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00420 vs. NCBI_GenBank
Match: EWM20784.1 (hypothetical protein Naga_100423g1 [Nannochloropsis gaditana]) HSP 1 Score: 103.6 bits (257), Expect = 2.400e-18 Identity = 117/343 (34.11%), Postives = 145/343 (42.27%), Query Frame = 0 Query: 51 PSAGPLLLALLAQSLSVLRLIETTRTQTEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEXXEQGGDGE--VQFVGFAPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRLVMSVIKICQKSLATLAPYVASNXXXXXXXXXXXXXXXXXXXQSYHRLGGRQGWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGITPFMAFEGEEEQACLVQLLGCVSRAGQVLQMLRREEANYFGVCSKGLYLREIRLLESGIGPLLRRMARATKKRREKANAKGEVRQQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIEHPTARLFWAKHF 392 PS LL ALL+QS++VLR+IE TR Q E A +E GG+ E F+GFA G LSRLVMSVIK+CQ+S++ L P AS + G G +A +E+ LVQLL C++R +L L+REE NYFGVC+K +Y REIRLLE+GI LR + +K+ EK +G+VRQ+LL XXXXXXXXXXXXXXX IEHPTARLFW KHF Sbjct: 14 PSTSALLFALLSQSMAVLRIIEATRAQDEIA---------EEKARLANEVAASAASALQAIEGVVDGGEHEEGAIFMGFASTG-------RETIRVPPAMAMPDAQEADTRKNGRDLSRLVMSVIKVCQRSISQLVP--ASQNPASSSSSLLSPFLHPIRERRKEEAGA-----PLPAMARSSDEGGSPSKEKSSGVATPLDLFGRRRVLAGREKEDAFHLVQLLECIARTRNILLKLKREEPNYFGVCAKEIYFREIRLLEAGIITHLRSLREIARKQHEK--HRGDVRQRLLSGDDGEDAAWAVGRGXXXXXXXXXXXXXXXW----IEHPTARLFWQKHF 327
BLAST of NO15G00420 vs. NCBI_GenBank
Match: EWM20783.1 (hypothetical protein Naga_100423g1 [Nannochloropsis gaditana]) HSP 1 Score: 99.0 bits (245), Expect = 5.900e-17 Identity = 136/343 (39.65%), Postives = 164/343 (47.81%), Query Frame = 0 Query: 51 PSAGPLLLALLAQSLSVLRLIETTRTQTEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEXXEQGGDGE--VQFVGFAPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRLVMSVIKICQKSLATLAPYVASNXXXXXXXXXXXXXXXXXXXQSYHRLGGRQGWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGITPFMAFEGEEEQACLVQLLGCVSRAGQVLQMLRREEANYFGVCSKGLYLREIRLLESGIGPLLRRMARATKKRREKANAKGEVRQQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIEHPTARLFWAKHF 392 PS LL ALL+QS++VLR+IE TR Q XXXXXXXXXXXXXXXXXXXXX +E GG+ E F+GFA G LSRLVMSVIK+CQ+S++ L P AS + G G +A +E+ LVQLL C++R +L L+REE NYFGVC+K +Y REIRLLE+GI LR + +K+ EK +G+VRQ+LL XXXXXXXXXXXXXXX IEHPTARLFW KHF Sbjct: 14 PSTSALLFALLSQSMAVLRIIEATRAQ----------DXXXXXXXXXXXXXXXXXXXXXAIEGVVDGGEHEEGAIFMGFASTG-------RETIRVPPAMAMPDAQEADTRKNGRDLSRLVMSVIKVCQRSISQLVP--ASQNPASSSSSLLSPFLHPIRERRKEEAGA-----PLPAMARSSDEGGSPSKEKSSGVATPLDLFGRRRVLAGREKEDAFHLVQLLECIARTRNILLKLKREEPNYFGVCAKEIYFREIRLLEAGIITHLRSLREIARKQHEK--HRGDVRQRLLSGDDGEDAAWAVGRGXXXXXXXXXXXXXXXW----IEHPTARLFWQKHF 326
BLAST of NO15G00420 vs. NCBI_GenBank
Match: CBJ33856.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 96.7 bits (239), Expect = 2.900e-16 Identity = 89/333 (26.73%), Postives = 127/333 (38.14%), Query Frame = 0 Query: 286 LRREEANYFGVCSKGLYLREIRLLESGIGPLLRRMARATKKRREKANAKGEVRQQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIEHPTARLFWAKHF-ECHDEVYWPRFVAAFEKEWGHHPQEAYDRFKKAVV-------RPPCPLPAPL----------------------------TPPMKEEGG---------------------------REDAGEGGLGE------GMVSLETYNRLTKSAGGLYELFQKEADPATLVYVMGTVEDDAHGP-------RSTFSPYVLRSFLGYAIKQVCCGGQHAAVLTLSGHIYTWGR 543 L N+FGV G+Y++E+R+LE+ I L+++ RE+ NA E GI + ARL+W++H E + + W F AF+ ++G + D +K + P P A TP ++ G E A GG+GE V+ Y +T + GGLYE FQ ADP +V+ MG V+D H S SP V++ LG +++QVCCGGQHAAVLT G I+TWGR Sbjct: 3 LNEGRPNHFGVFRAGVYVQEMRMLEAKILELVQQ----ADNPREEKNAGLET----------------------------------TTVAAGIRNCVARLWWSRHAGENGETMTWEAFEEAFQTDFGAQLPKTLDVLRKHIAVQGDDYRAAPVPSTAXXXXXXXXXXXXXXXXXXXXXXXXRRAGESTPARSQQNGASRDYFRPCGGSGKARGKGVEGQTLTVEEAAAAGGIGEEETSATWRVTASLYEEVTWAHGGLYEAFQALADPRRVVFAMGVVDDGPHHEVGEGGEGWSDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEIFTWGR 297
BLAST of NO15G00420 vs. NCBI_GenBank
Match: EWM20781.1 (regulator of chromosome condensation -like protein [Nannochloropsis gaditana]) HSP 1 Score: 95.9 bits (237), Expect = 5.000e-16 Identity = 48/122 (39.34%), Postives = 66/122 (54.10%), Query Frame = 0 Query: 518 IKQVCCGGQHAAVLTLSGHIYTWG-------------------------------RDVACGNNCTVLLAGPYRVPKLIEISLQVIIHHWPLYQHVDFAEILPTELFSLLRRMQSHATSLPLS 609 +KQ CGG+H+A L + +YT+G +DVACGNNCTV+L G +R+P L E L+ I +W LY+H+DFAE LP +LF LRR+Q H++ LS Sbjct: 299 VKQFACGGEHSAALLNNDEVYTFGAGARGQLGHGDSRNEAYPRLNQTMRATRRVIKDVACGNNCTVMLVGAHRIPPLTEYCLEFITQNWSLYRHIDFAEALPHDLFLALRRLQHHSSFHDLS 420
BLAST of NO15G00420 vs. NCBI_GenBank
Match: XP_005854961.1 (hypothetical protein NGA_0379800, partial [Nannochloropsis gaditana CCMP526] >EKU21401.1 hypothetical protein NGA_0379800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 85.9 bits (211), Expect = 5.200e-13 Identity = 45/80 (56.25%), Postives = 54/80 (67.50%), Query Frame = 0 Query: 394 HDEVYWPRFVAAFEKEWGHHPQEAYDRFKKAVVRPPCPLPA-PLTPPMKEEGGRE----DAGEGGLGEGMVSLETYNRLT 469 H V WPRF+AAFEKEWG HP EAY RFKKA+V P LP+ P+ EGG E + G G+GEGMV++E Y+RLT Sbjct: 2 HTAVCWPRFLAAFEKEWGPHPDEAYGRFKKAIVSPSASLPSLPVRSLPTGEGGTEVPGVERGGEGVGEGMVAIEVYDRLT 81
BLAST of NO15G00420 vs. NCBI_GenBank
Match: XP_005854958.1 (hypothetical protein NGA_0379500, partial [Nannochloropsis gaditana CCMP526] >EKU21398.1 hypothetical protein NGA_0379500, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 79.7 bits (195), Expect = 3.700e-11 Identity = 79/269 (29.37%), Postives = 100/269 (37.17%), Query Frame = 0 Query: 51 PSAGPLLLALLAQSLSVLRLIETTRTQTEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEXXEQGGDGE--VQFVGFAPLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSRLVMSVIKICQKSLATLAPYVASNXXXXXXXXXXXXXXXXXXXQSYHRLGGRQGWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGITPFMAFEGEEEQACLVQLLGCVSRAGQVLQMLRREEANYFGVCSKGLYLREIRLLESGIGPLL 318 PS LL ALL+QS++VLR+IE TR Q E A +E GG+ E F+GFA G LSRLVMSVIK+CQ+S++ L P AS + G G +A +E+ LVQLL C++R +L L+REE NYFGVC+K +Y REIRLLE PLL Sbjct: 14 PSTSALLFALLSQSMAVLRIIEATRAQDEIA---------EEKARLANEVAASAASALQAIEGVVDGGEHEEGAIFMGFASTG-------RETIRVPPAMAMPDAQEADTRKNGRDLSRLVMSVIKVCQRSISQLVP--ASQNPASSSSSLLSPFLHPIRERRKEEAGA-----PLPAMARSSDEGGSPSKEKSSGVATPLDLFGRRRVLAGREKEDAFHLVQLLECIARTRNILLKLKREEPNYFGVCAKEIYFREIRLLEVSFLPLL 259 The following BLAST results are available for this feature:
BLAST of NO15G00420 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 6
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00420 ID=NO15G00420|Name=NO15G00420|organism=Nannochloropsis oceanica|type=gene|length=4976bpback to top protein sequence of NO15G00420.1 >NO15G00420.1-protein ID=NO15G00420.1-protein|Name=NO15G00420.1|organism=Nannochloropsis oceanica|type=polypeptide|length=661bpback to top Synonyms
Publications
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