NO15G00310, NO15G00310 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO15G00310 vs. NCBI_GenBank
Match: XP_005852488.1 (hypothetical protein NGA_0717900 [Nannochloropsis gaditana CCMP526] >EKU23345.1 hypothetical protein NGA_0717900 [Nannochloropsis gaditana CCMP526] >EWM20802.1 Rubredoxin domain protein [Nannochloropsis gaditana]) HSP 1 Score: 247.3 bits (630), Expect = 3.100e-62 Identity = 124/150 (82.67%), Postives = 138/150 (92.00%), Query Frame = 0
Query: 1 MARHATSSLLTLLCLALLAVSSFAFMPMRPSLSLSRMKAASLSAPSSRGTRNGRSKGLTAMDMQYWEGEWVCADCGYIYNEQDCGGMRFEDQKRGFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPILLFSIVGGLAVIGFGIYAALSGI 151
MARHA ++LT +CL L+A+SS AFMP+RP+LSLS+M+AA+LS PSSR + +GRSKGLTAM +YWEGEWVCADCGYIYNE DCGGMRFEDQK GFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPIL+FSIVGGLAVIGFGIYAALSGI
Sbjct: 1 MARHAPFTVLTFVCLVLMALSSVAFMPVRPALSLSKMRAATLSGPSSR-SPSGRSKGLTAMSGKYWEGEWVCADCGYIYNEADCGGMRFEDQKTGFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPILVFSIVGGLAVIGFGIYAALSGI 149
BLAST of NO15G00310 vs. NCBI_GenBank
Match: GAX26445.1 (hypothetical protein FisN_37Hu005 [Fistulifera solaris]) HSP 1 Score: 135.6 bits (340), Expect = 1.300e-28 Identity = 58/85 (68.24%), Postives = 69/85 (81.18%), Query Frame = 0
Query: 61 MDMQYWEGEWVCADCGYIYNEQDCGGMRFEDQKRGFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPILLFSIVGGLAVIGFGIYA 146
++ QYW+GEWVC DCGYIYN +C GM FE+Q GF+CPQCS PRRR+AKKVGD++G T DGGDAPILLFS G +A I FGI+A
Sbjct: 41 VNSQYWQGEWVCKDCGYIYNRAECAGMYFEEQGPGFRCPQCSGPRRRYAKKVGDRVGTTLDGGDAPILLFSFGGVIATIAFGIWA 125
BLAST of NO15G00310 vs. NCBI_GenBank
Match: XP_002287802.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED95245.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 132.5 bits (332), Expect = 1.100e-27 Identity = 67/143 (46.85%), Postives = 94/143 (65.73%), Query Frame = 0
Query: 8 SLLTLLCLALLAVSSFAFMPMRPSLSLSRMKAASLSAPSS-----RGTRNGRSKGLTAMDMQYWEGEWVCADCGYIYNEQDCGGMRFEDQKRGFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPILLFSIVGGLAVIGFGIYA 146
+LL L A+ + AF P P +++ + ++++ P+S + + + A+ +YW+GEWVC DCGYIYN +C GM FE+Q GF+CPQCS PRRR+AKKVGD++G T DGGDAPILLFS G +A I FG++A
Sbjct: 4 NLLIALIAAICMAQTLAFAPSTPRAIVTQQR-STIATPTSLNVFGKKKTQAQKEEEEALAAKYWQGEWVCKDCGYIYNRAECAGMYFEEQGAGFRCPQCSGPRRRYAKKVGDRVGTTLDGGDAPILLFSFGGLIATIVFGVWA 145
BLAST of NO15G00310 vs. NCBI_GenBank
Match: EJK70775.1 (hypothetical protein THAOC_07837, partial [Thalassiosira oceanica]) HSP 1 Score: 132.1 bits (331), Expect = 1.400e-27 Identity = 68/136 (50.00%), Postives = 85/136 (62.50%), Query Frame = 0
Query: 10 LTLLCLALLAVSSFAFMPMRPSLSLSRMKAASLSAPSSRGTRNGRSKGLTAMDMQYWEGEWVCADCGYIYNEQDCGGMRFEDQKRGFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPILLFSIVGGLAVIGFGIYA 146
L + +LA S+ F P +SR SLS R T +++ A YW+GEWVC DCGYIYN +C M FE+Q GF+CPQCS PRRR+AKKVGD++G T DGGDAPIL+FS G A I FG++A
Sbjct: 7 LLAILFCILASSALGFAPSAQRAVVSRPSTTSLSVFGKRKTEAQKAEE-EAKAAMYWQGEWVCKDCGYIYNRAECANMYFEEQGAGFRCPQCSGPRRRYAKKVGDRVGTTLDGGDAPILIFSFGGLAATIAFGVWA 141
BLAST of NO15G00310 vs. NCBI_GenBank
Match: CBJ32572.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 131.7 bits (330), Expect = 1.900e-27 Identity = 75/146 (51.37%), Postives = 90/146 (61.64%), Query Frame = 0
Query: 18 LAVSSFAFMPMRPSLS----LSRMKAASLSAPSSRGTRNGRSK----GLTAMDM---------QYWEGEWVCADCGYIYNEQDCGGMRFEDQKRGFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPILLFSIVGGLAVIGFGIYAA 147
LA S F+P + S SR A+S A SS R G S G+ M M +WEGEWVCADCGYIY+ DCGG+ E+QKRGF CPQC PRRRFAKKVG+++G+T DGGDAPILLFS +G A + FG + A
Sbjct: 12 LAASVNGFVPAPAAFSKGQFASRAAASSQVARSSISPRTGVSSASNPGVGVMMMAAKAEEATRSFWEGEWVCADCGYIYDIDDCGGLYLEEQKRGFVCPQCRGPRRRFAKKVGNQVGITQDGGDAPILLFSFLGLWATVAFGYWFA 157
BLAST of NO15G00310 vs. NCBI_GenBank
Match: OEU20665.1 (hypothetical protein FRACYDRAFT_234296 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 126.7 bits (317), Expect = 6.000e-26 Identity = 54/81 (66.67%), Postives = 63/81 (77.78%), Query Frame = 0
Query: 65 YWEGEWVCADCGYIYNEQDCGGMRFEDQKRGFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPILLFSIVGGLAVIGFGIYA 146
YWEGEWVC DCGYIYN +C + FE+Q GF+CPQCS PRRR+AKKVGD++G T DGGDAPIL+FS G I FGI+A
Sbjct: 71 YWEGEWVCKDCGYIYNRAECADLFFEEQTPGFRCPQCSGPRRRYAKKVGDRVGTTLDGGDAPILIFSFGGVALTIAFGIWA 151
BLAST of NO15G00310 vs. NCBI_GenBank
Match: OLQ00018.1 (Polyubiquitin 11 [Symbiodinium microadriaticum]) HSP 1 Score: 115.5 bits (288), Expect = 1.400e-22 Identity = 51/74 (68.92%), Postives = 62/74 (83.78%), Query Frame = 0
Query: 64 QYWEGEWVCADCGYIYNEQDCGGMRFEDQKRGFKCPQCSAPRRRFAKKV----GDKIGVTNDGGDAPILLFSIV 134
QYWEGEW+CADCGYIYNE+ GM+FED ++GFKCPQC+APRRRFA+K+ GDKIG T DGGD PI++F+ V
Sbjct: 26 QYWEGEWICADCGYIYNERSF-GMKFEDLQQGFKCPQCAAPRRRFARKLGAAAGDKIGTTLDGGDTPIIIFTAV 98
BLAST of NO15G00310 vs. NCBI_GenBank
Match: CEM16421.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 108.2 bits (269), Expect = 2.200e-20 Identity = 65/141 (46.10%), Postives = 82/141 (58.16%), Query Frame = 0
Query: 8 SLLTLLCLALLAVSSFAFMPMRPSLSL---SRMKAASLSAPSSRGTRNGRSKGLTAMDMQYWEGEWVCADCGYIYNEQDCGGMRFEDQKRGFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPILLFSIVGGLAVIGFGIYA 146
SL+ CL L A + AF P+ S SR+ ++ A + T LT + YW+GEWVCADCGYIY+ G FEDQ GFKCPQC APRRRFAKKVG +G GGDAPI++FS +G V+ ++A
Sbjct: 5 SLVIAPCLLLCASIAHAFTFSNPAASAGASSRLLPRNIIARRAPATALAAETTLTPPE-GYWQGEWVCADCGYIYDPSLFGNKWFEDQGPGFKCPQCQAPRRRFAKKVGSVVGQKIGGGDAPIVIFSFLGLALVVAAAVWA 144
BLAST of NO15G00310 vs. NCBI_GenBank
Match: OEU13104.1 (hypothetical protein FRACYDRAFT_190559, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 100.1 bits (248), Expect = 6.000e-18 Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 0
Query: 67 EGEWVCADCGYIYNEQDCGGMRFEDQKRGFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPILLFSIVGGLAVIGFGIYA 146
EGEWVC CGY YN +C + FE+Q GF CPQCS +R+AKK+G+ +G +DGGDAPIL+FS G I FGI+A
Sbjct: 1 EGEWVCKVCGYSYNRGECASLFFEEQSAGFCCPQCSGSCQRYAKKIGNCVGTMHDGGDAPILIFSFGGVALTIAFGIWA 79
BLAST of NO15G00310 vs. NCBI_GenBank
Match: XP_005535592.1 (hypothetical protein CYME_CME080C [Cyanidioschyzon merolae strain 10D] >BAM79306.1 hypothetical protein CYME_CME080C [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 91.7 bits (226), Expect = 2.200e-15 Identity = 42/85 (49.41%), Postives = 57/85 (67.06%), Query Frame = 0
Query: 62 DMQYWEGEWVCADCGYIYNEQDCGGMRFEDQKRGFKCPQCSAPRRRFAKKVGDKIGVTNDGGDAPILLFSIVGGLAVIGFGIYAA 147
D + W G W+C DCG+ Y+ + GM E Q F+CPQC A +RRFAKK+G K+ +T D + PI + S++G LAVI FGI+AA
Sbjct: 148 DYEIWPGSWLCVDCGWEYSTK-AFGMPLELQPETFRCPQCGARKRRFAKKLGSKVAITRDTSNLPIFVMSMLGLLAVIAFGIWAA 231 The following BLAST results are available for this feature:
BLAST of NO15G00310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 14
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO15G00310 ID=NO15G00310|Name=NO15G00310|organism=Nannochloropsis oceanica|type=gene|length=2193bpback to top protein sequence of NO15G00310.1 >NO15G00310.1-protein ID=NO15G00310.1-protein|Name=NO15G00310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=151bpback to top Synonyms
Publications
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