NO14G03250, NO14G03250 (gene) Nannochloropsis oceanica

Overview
NameNO14G03250
Unique NameNO14G03250
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6161
Alignment locationchr14:971823..977983 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:971823..977983 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
Homology
The following BLAST results are available for this feature:
BLAST of NO14G03250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL136nonsL136Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR041ncniR041Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK003284NSK003284Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G03250.1NO14G03250.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|634641gene_11751Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G03250.1NO14G03250.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G03250 ID=NO14G03250|Name=NO14G03250|organism=Nannochloropsis oceanica|type=gene|length=6161bp
ACAGACCTTCAAATGCCGAGCAACAGTCCCATAAAACCCTCGGCTCCTTC
CTCGGCTGACAGAGTCAGTCGTGTCCTTCTCCCAGCCATCACCACGTGTC
AACATGTTTCACCCACCCCTCCTGCGCATTGTGTCTTGATTCCCACAAGA
AAAGCCACCACCAAAATCAGCACTTCCAAGGTCTCCAAGCAGAGGTATAC
TCCCGCCCCTCGAGGAGAGATGAAAAGCAGAAGCAGgtacgtccacaaga
cttacatggctcactacaccgactttctctcacctgtgtcccgctttttc
tccttccaatccgcacctacacaaagCACTGGCAACGCGCAGGCCTGCGT
GACCTCTCACGTTGTCCTGCCCGTTGGAGAGAAAGCAGAATTATCCGCCA
GGAGCAGCCGCAGCAGCAGTGCCACTGCCTTGCTAGGCGGCGATGCCCAA
CCTACCAGCATTGGCGCACGGGAAGGTGCGCCCAAATCGAAGgtaggagg
ggctgggagtaagggaggatgggaaggagagaaggagggaggactggcac
gtacatggcacaccccattgatttctgaggaggagcgaagaagaaaaaca
agacaaaggaagagaaatctttcgtgtgcgggtgcaaagtgatcagcgcc
acagatagaatagtgtcggtgaattggcgaaggatgagaagagggagagc
gcgggttgtaccttttacagcaatacttgtaatattgtgtactctcacaa
actgctactcatacagAAGGCCGCAGATGGAGCTGAGGAAGAAAGACACG
AAACCAACGAAGAAGACCAAGAAGACGAAGAAGAGGAAGAAGAGGAGGAA
GATGCCAGGTCGGAAAATGAGGGGGAGGAAGGAGAGGAGGAGGATGAGGG
GGAGGAGGAGGGGGAGGAGGAGGAGGAGGAAGAAGAGGAGGAGGAAGAGG
AGGAGGAGGCAAAGAAGATCGAGGAGGAGAGGAGGGAGACAGTGCCAAGG
GAAGATAGGGATATCGCTATTGAGAGgtaaagatttgaggttgggattgt
gtatatttttcgattcatgtgtgtattaccacttgtgagatgagaaagta
ggatgagaaattgtcgcgctgccgcatcctccctcccttcttccctccct
ccttccctgcctccctcttcccctcccttgagtagtagggcgcgcatact
agcgctcatgttttcctctatctcaacttcctcctcttcctccctccttc
cctcgagtggcggggcacgcaaagtatccacatgtgcctactcgccagta
atacaaggaatgtcaggccagcgcagctctaacctccgcccgctcttttc
tttctttccacccacagCAAGCAGCAGAAGCAGCAGCAGCAGCATAACGC
ATCTCGCCCTCTGGGCATCAAAGCTCCGGCTGCCGGCCCTCCTCCTCGCC
CTTCCCTCCTATCCCCCTCCATGGCCTCCCCCACTACCACCGTGGCCTCC
ACATGCCCCTCAACACCCTCCAACCCCTCCAGCCCGTCCCCTTTCACCTC
CTCCTCTTCTTTCTCATCCTTTTCCTCGGCCTCCACTTCCTCCCCCGCCC
CTATCCCCCATCCGCGTCATCCAGCCCTCGCGCTCGCCCCCGCGACGACT
CGTAAAGACAAGCCGTCCCAGgtactttaacttcgagggaggaggggaag
gggagtggtacccggagggagggagagagggatggaggcgtcggatggat
gaggggatcgatcactggcattgtctccttctcttcccctttccttcctt
tcttcctcctccccccttcacctcctccctcccttctcccagCCCCCCCA
CAAGGGTCCCAGCCGTCGATACGAATGCCGGCAGGGGGCAGGGAGAGTGC
AAGACCACGCGCCATCGTGCAGgtagagagggagggagggagagagggcg
ggggggagggaaggcaggaaggcggatggatgaggactcacaaccgattc
gatgacgttccaaactactaccgcagCAAGGGCCGCGATGATTCTCCTTC
CCGCATTCCTGACAGGCGGCAGCAGCAGCAGCTGCAGATGAAGGAGGAGG
GAAGGAAGGGAATGGTAGCCTTGTCGGGAGAGGgtgagtggtgcctgtct
acctccaccccccctctttctccttgactcggtccacgtccggcttgcct
gtacaagcccctcatccacactctcctcccttcgtccctccctccctcct
ttcctccctccctccctccctcagTCGCAACCGCCACCCTACCTTGTTTC
TCCGCGGACTCCCGCGACGCCACAGGGGAGTTTGGCCGCGGAAAAGgtta
gaagggggaagggagggagggagggagggatcgagggaggaatgtgctga
catgttgtgtttatggacatctttcgaacgacctttccctccccgtcgcc
tgccccccccctcttctttacccttctcacctgcagGAGGCTACATTCGC
ATGCCCTGGGATCCCAGCAACGgtacatgccctccctctctccctccctc
cttccctccctccttccatccatatctcctatcttccataggtgcccatt
aaacgcaccatccttccttccctttccccttcccgtcccccagGGCGTCG
CTACTGCTACTACATGCACTTCGGCGGCTGCACGTCCGGAAGCGCCTGCA
CGTACTCGCACAACGAGgtgcgtttcctccctccttccctccctctttcc
atctctccctctttccgtcctccaccaggactatgcgtagattaataagt
ctgcattccactcattccccccctccccccctccttccctcccttcctcc
cccgtcagATGGACATTTCCCAGTTGACCTACGCCTATCGCACTACCCGG
CAGCAGCACCAGAGCTACAGCAACAGCAGCACCGCCCCCCCCATCTCCTT
TCCTGAACCCTATCGTCCGCATGGTGGCGAGATGCACCACGgtagggagg
gaaggagggagggagggagggaggagtgggtgcacgtgtgagactccgcc
ggtggagctgcctttcctcggtctcctctcacgtaactgctcgacatcct
aaccgtccggcccgcctgccctctttccctccctccttccctccctccct
ccttccctccctcctagACGCGCATTCCTACAGTTTCCTCTGCGGCGAGG
AGGGGCAGCACCCATCTGGCCCTTACTTCTTCGATCCCTCCCTCCATCCC
TCCTTCTACCCGCCCTTCGCCTCGGAGGAGGAAGCCTACATGTGCACGAT
GCAGCCGGAGGGGTATTATATCGAGgtagggggatagtaagggtcaggga
gtgtcggcgatctagagaagaatatgcaagagagtgatgtttctcagcac
cgaccttcactcccatccattcatgcacccacacgctcagTATCCCCCCC
CGGCTCATTTCGTCTCCCATGCCCCCGCCCACGGCCAGGCGCTCCCTCCG
CCTCCTGGGCCCCTCGCCTCCATGCCTCCTCCTCCCCCTCCTTATCTCTA
CCCGCACCAGCCGGTGGTCTTGCACgtatgtaggaggaagagggggaggg
agaagggggggaggcaggaaggaggatggggttgtggggtgtagaggaat
ggcaccgtgaattcaatactccttcttgtttcgaatcactcattcctccc
cccctccctccttccctccctcagGACGGCTACCCGTACCCATATAACCC
CTACTGGACGATGACCGGAGTGTCATATCCCATGCGTGCTTCCCCCCTCC
CTTCTACCTCCTTCCTCCCTCCGTTTCCGGCGCTGCCATCGCCGGGAAAA
AGTGAGCGCGGGCCCGAGACGGAAGGATGGAGGGAGGGTGGGGGGGAGGG
GGCTGCGGACCCGTCGGCCTGGTGACAGCGGCGACAAAGCGAGGATTTAG
CGCGAGAGGAGGAAGGTCATATATATCTGGGATGTAGGCAGTAGCAGCAG
CAGCAGCAACAGCAGCAGCAGTGATGGTAGCGGCAGGTGCAGTATAAACC
GCAGTAGGAAACAAGAGATTTGTAGCAGTAGGTAACAAGAAGAGATATAG
AACAATAGGAAGCATCAGGAGATACGTGGCAGTAGGAAACAACAAGAGAT
TTGTAGCTGTAGGAAACAACAAGAGAACAGGAGGAGGAGGCGAGATATGT
AGCTGTAGGATACGATAGATTATATGTGGGGAGCATCAAGAGATACAGGG
CAGTAAGAAGCATCCATATATATGTAGCAGTGTGGAGCATAAAGAGATAT
GTCGTAGTGGGGTGCAACAAGAGATGTGTAGCAGTAGGAAACAACAAGAT
ATATGGGAGTAGGAAGCATCAATATATATGTAGCAGTGGGGAGCATCAAG
AGATATGTAGCAGTTGGAAGCAATGCGTCTTGTAATAAGAGTCATGTGGC
AGAAAACAATAGCACTTATGTAGCAGTAGGAGGCAACTAGAGGTATTTGT
AGGCGTAGGAAATATCAAGACACATTTATAGGCGGAGAAAACAAGAAGAG
ATTTGGGGCAGTAGGAAATAACAAGAGATATGTAGCCGTTGGAAGCAATG
ATGGCGATCTATCCCCCCCCAGAAAAACAAAAAAAGCATAAAAACTTTTC
GTACATACTTATGTGGCAATAGGAAGCAACAAGAGATACGGAGCAGTAGG
AAATGGTAGGTTATAGGTGAGGAACATCAAGAGATATGTGGCTGTAGGAA
GAAAGGAATATGTCTTATGTGAGGAGCAATAAGAGTCATGTGGCAGCCGA
AAACAATAGCGCACTTATGCAGCTGTAGGAGGCAACGAGAGATATCTGAC
ACGACAAGATATGTGGCAGTAGGAAGCAAAAATCGAGAACTAGGAGTAGA
AGACCTGGCGATAGGAAGCAGAAAGAGCTAAGTGGCATGAGAAGGTAGTA
AGATATGTGGGAGGCAGGAGATGTAGGCATCAGGTTGAAGGATGGGTGTA
AAGGCGAAAAGAACAAACACCAAAGTGTGCAGGAAAATGGGAAGGGTGAG
AGGCCAGTGGGAAACATGGATCGAATAGAAGGCTATTCGTACGCGTGCAT
GAACAGACATGTAGAGTCACAGAGGGGCAAGAAAGGGGAGTAAATTAAAA
GGGAGTGAGAAAGAAAGGAAAAAAAAAAACTGTTGATTCTGTCTGTGTGC
ATTCAAGTCTAAGTCGTGGATCGGGAGCAACGTGCACGAATGAAAACCCC
AACGAAGCCAACCCCTCAAACAGAGATCATTTTCGGCACTTCTCGCCCCC
TCCCCTCTATCTCCTCCTCGAGTCCAAACGCTTTGCAATTTCTCGCCGTT
TTTGCCTTTGTAAGTGTGCATTGCATTCTTTGTTTTTTTGGGGGAGCTGA
ATGGCTATGGTGTGGGCCACCATCAAGGTGGCCGATCACACGTTCGTGTT
TGTGTCAATTGATTGCAGGCAGACGGTGTGAGGAGGAAGCGGAATTGATG
ATTGGCGCCATCGGCCCGAGCGAGAAGAAATACCTGGTCAAGCTAGCGGC
AGAGACGACCATTGCCCCTAGCCACGCGGATCACTTTAGGGTCATCATCG
ACCCATCTGCGGCCACAGGTGAGTAAGAGTTCACCAGAACACAGGTGAGT
TCACCAGGCACTTGGTTACGGACGGCAGTGGCGCATTTAGGTGGGGTGGG
AAGTTCGTGGTGGAAGACAAACCACGTGAAGACAGATGACGAGGGAGGGG
AAGGAACCAATCCGGCAGCCCCTCTGCATATCTGCACGATCCACGATCCA
GGCGATAGGACGATGATCGTTAAGGGAGGCCCTCTTTGAGGGTTGCCTCC
TCCAGGCATCCCCGGATGCGGCAAACCTCTTTGGTGGACATGAAGCGAGA
CCATGGGAATCATGGGGATTCCGGCTTAGACGACGCGGCCAATCCTCATC
CGGGCCCACGTGGATCATACCATTCAGGCGGTCTAGCCATATTTCCCAGG
CTGTCTAACGGAAGGAGGAAAGGAGGCAAGTGTGAAGGTTCGCACGATTT
GTGCAAACCAAAGGCCGTCCATGACAGTGTGCTCCTTTCTTGGAGTTGGC
CTGTATTTTGATAGTGGGATGTGTGAGCAGCATCGTGTGTGAGAGGAGGT
CAGCATTGAAG
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protein sequence of NO14G03250.1

>NO14G03250.1-protein ID=NO14G03250.1-protein|Name=NO14G03250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=650bp
MPSNSPIKPSAPSSADRVSRVLLPAITTCQHVSPTPPAHCVLIPTRKATT
KISTSKVSKQRYTPAPRGEMKSRSSTGNAQACVTSHVVLPVGEKAELSAR
SSRSSSATALLGGDAQPTSIGAREGAPKSKKAADGAEEERHETNEEDQED
EEEEEEEEDARSENEGEEGEEEDEGEEEGEEEEEEEEEEEEEEEAKKIEE
ERRETVPREDRDIAIESKQQKQQQQHNASRPLGIKAPAAGPPPRPSLLSP
SMASPTTTVASTCPSTPSNPSSPSPFTSSSSFSSFSSASTSSPAPIPHPR
HPALALAPATTRKDKPSQPPHKGPSRRYECRQGAGRVQDHAPSCSKGRDD
SPSRIPDRRQQQQLQMKEEGRKGMVALSGEVATATLPCFSADSRDATGEF
GRGKGGYIRMPWDPSNGRRYCYYMHFGGCTSGSACTYSHNEMDISQLTYA
YRTTRQQHQSYSNSSTAPPISFPEPYRPHGGEMHHDAHSYSFLCGEEGQH
PSGPYFFDPSLHPSFYPPFASEEEAYMCTMQPEGYYIEYPPPAHFVSHAP
AHGQALPPPPGPLASMPPPPPPYLYPHQPVVLHDGYPYPYNPYWTMTGVS
YPMRASPLPSTSFLPPFPALPSPGKSERGPETEGWREGGGEGAADPSAW*
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Synonyms
Publications