NO14G03130, NO14G03130 (gene) Nannochloropsis oceanica

Overview
NameNO14G03130
Unique NameNO14G03130
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3855
Alignment locationchr14:932675..936529 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:932675..936529 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G03130 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G03130.1NO14G03130.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|590731gene_5891Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G03130.1NO14G03130.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G03130 ID=NO14G03130|Name=NO14G03130|organism=Nannochloropsis oceanica|type=gene|length=3855bp
AAAGGAAAGAGCTTAGgtaatggcgagcgaaagaaacaaattgaactttt
ccaggtgccttgcgtttcatgtgtcgtgcgtgggaagtaatgagcgcata
aacactgtacaagagctcctgcaatgcaaaaagtgctcgatgtgatgttt
gtcgattttcgcttaaaccaaacgcccaccggccgagcacaagatgcaga
gaagctactttttccacatcttgaatgaagttgcctttcatttacactcg
actcatccgatgcgcacccactctatccagcgttttgacgtaagaactcc
gaaagaaaataaattgcctgagcttggctggttcacccgctcactgacac
tttccgtattcaagcccgtccgagtcccttgacgcccccgggattggaca
cctgaccccaatatggcccgctatgccgagttgttgatatgcaagcgtat
ccttattttccttccccttcgctacctctagGCTACATATCTATCAACCA
CCCATGGCCGCTGGACGAAGGACTGTGGTGGCGGGTGGCAGGAGCAGCGG
CATCAATGAGGAAGGTGGCGCCGGTGAAGTGAAAAAAAGGGGAAACGGAG
GAGGAGCGGCTGCAATGCCGATGCCTTGCACGCCCGAGAAACCCAGGgta
agaaaagaaaaaggaaggagaatagctaatgagatgacggggcttgggaa
tagagggccggctccttttcccccacggccggtcacctcccaccaaaatc
atgccgatgtgccagcctggcctggcgtatgaaagcccgatagatatggt
gaatattaaaatccagacgcatgcatatcgaggaagaagcgaaaatttct
ctcttgcctgaccagttgctcagacaaggcgatgccaatctcagggaatc
atctcattcctccctctgtccgcccatcccttcctgcgtccctcccttcc
tccacatagGCACCGAAGGCGCCTGCTGCGCCCATCAAGCGCGGCGGTGT
GAGTCACGCGGTGGCTGCTGTGTCAGAGGGAAGCAAGCCCGCGCCTACCC
CTTGCTCCACCTCTGCCTCATCCTCGTCCTCGTGCTTCCCCTCCTTATTC
ACCCTCCTGTTCCTGGTTGTGGCCGCCGCCGTATTGTCCCTGTCCTTTCC
CGCCATTTATGAATTGAAGCAGATCGTGCAAATGCAAGGgtgagtcgatc
gcgagaggggaagggggagagggaagggaaggaaggaagggaagaggagg
gagatgtcttgttgtggtggcattataacaatccttatccctcttccgct
acctcccctccgtccctggactcttctttcgctccccttaaagACTCAGC
GAGAGGGAAGTCCGCAAGATCGTGGTGGAGACGATGGAGAGCCAGACCCA
AGGGCATGGCCGAGGGCGCAGGCAAGGGCCATCACCCAAGgtacgcccct
ccctccctcccaccctccctccctccctccctgcatccctctctctgtcc
cccttctcccgtcatctttgatacatcccggctttcctcctttcgtccat
cactctccctccgtgccggcgtttctcgctccttcacactcccctccctc
cccttcgtcctccttgcacgtagATTAATAAGGAAGACGTTCGCCAGGTC
TTCAGGGACCTGATGAAAGAGGAGGGGGCTGgtgagtgaagggatcggat
cagggagagtgagaagaagggatgaaggggagaaaagaaggagggcggga
tggtctgggctgtttattttggcctcacattctctcctctcccctccctc
cctccctcccttcttgtccccctcccttcctccctcccctcttccctctc
ttcctagCTCTTCTTGGTCCTGCCCTTCAACCTCTTACTGCTGCTGCTGC
TGCTGCTCCTCCTCCTCCTCCTCCTTCTCCTGCCATCGATGACAACAAGC
TCCAAAAATGTGTTTCCACAGAGgtacattattgcttgtccttcctccct
ccctccctccttccctccctccatttcaccgccctgtccgtatcctctct
tcgttaccaccaccttccctccatccctccctccgaccctccctccctcc
ttcttccattctccaagggcgctcgtcagcctttacaggccgaccagaca
acttctcacccctccctccctcccccctccctccctccccccctccctcc
ctcctttcctcccttcctcctttcttcccctttttccttcctccctttct
cccttcctcccttcctcccttcctccctccctccctccctccctccctcc
ctccctccctccctccctacctacctccctaccgttcgttttccctcctt
agGTGGCACGTCAGCTGCGAGCATATGGGCCACAGGGGCAACCCGCTACA
GAGGAAGAGAGGACAGCAGCTGCTGCCCGAGGGGCGGTTCCTTGAGGGAG
AGCGGGAAGGAGGGAGGGAGGGAGCCGACATTTGAGGAAAAGTAGAGGAA
GTGACACGACACACAACACACGATCTCCCCTACGTGTGAGTGAGTGTAAG
ACGAGGGAGCAAGAAACACTGAGAATTGAATACAAATGAGTGAAGTGGCG
TCAGGGTATGAAAGCAGTAGGTGCATGTAAGCTTGTGTGTATGTGTGTGT
ATATGTTTGGAACAACGTTCAGAGAAGGGACTGCTGCTGCTGCTACGACT
GCTGCTGCTACGGAGGTCGTTCGAGCAGCAGCCTGCCGTGGTAGTGATTC
TTTGCAAGGGAGGAGAAGCATGGAAGGGGACGAGAGAGAGGTAGGGAGTA
AAGGAGGGATGGATAAAGGCGAGAGAGGAGCCGGAGAGCGATACACGGCA
GGCACAAAAGTCACGTAATGAGGAGGGCAGGGAGGGAGGGAGGGGAAGAT
TGACAAAGCCAGTATTTTTTGAAAAGCTGTTACATCGGTGGGCCCCTCGC
TCGTCCTATATCATGGCTTTCGCTGAGACTTACATTTCATTCCTTCTTTT
GAGCCCTCCCTCCTTTCTTCTTCGCGGTTGTTATCTCTCCCATCCCCCCA
TCCGTTCTTCTCTCGATCTCGTATTTGTCTTCTTCCTCTCACTTGACTTC
TCTCATCCTCCTTCCCATTTTGTTGTTCTTCTTTTTCTTCTTCCTAACTC
TTCTTCTTCTTCTTCTTCTTCATCCTAACAACTCTTCTTCTTCTTCTTCC
TCTTGGTCCTCTTTTCTTACCTTTTTTCCCTATTCTTTCTCTTCTCTTTA
TTCTTTTCTCCTAAATTTTGCACTTCTCCTTATTCTCCTCTTATTATTCT
CTTCTTAATATCTTTCTCTTTTTATTCGTCCTGTTCTTTTCCTCCTATCT
TTTTCTTGGTCGAATCTTCTCCTCCTTCTATATTGCATTGTCATTCTCCC
TTCCTCTTCCTTTTTTGTCGCCCACCAAAATTGATGTAAATGTGAACGCG
GAAACCCCTGGCAGTCAACGGCTCAGACTTGTCAGGTAAACTGCACCTGG
CACCGAAACGTCATCGTTACCCAAAAATTTGAAAATTTGAAAACATGAAT
AAAAAGACAATGTGCGGATGTTACCCTCACAATGACAAGACGACGCGGGA
GAAAAGGAAGAATGGAAGAAGAGAATCAGAGGTTCAGAGCTCCCCTTATC
AGGCGTGCAGCGTCCGCATGCATATATCCCTTCTCCCTCTTCACCCTTCC
CATCTCAAAACCACCGAGAAAAATTTTCCCTTTCCTCCTTCCCTCCCCAA
AAATATTTGTCCCCTACATGAAAGAGTCACACAAATCGCGCCGAGGTTAC
ATACAGCCCGTCAAAATCCCTTCCTCCTCCCCTCCCTCCCTCCCTCCCTC
CCTCC
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protein sequence of NO14G03130.1

>NO14G03130.1-protein ID=NO14G03130.1-protein|Name=NO14G03130.1|organism=Nannochloropsis oceanica|type=polypeptide|length=246bp
MAAGRRTVVAGGRSSGINEEGGAGEVKKRGNGGGAAAMPMPCTPEKPRAP
KAPAAPIKRGGVSHAVAAVSEGSKPAPTPCSTSASSSSSCFPSLFTLLFL
VVAAAVLSLSFPAIYELKQIVQMQGLSEREVRKIVVETMESQTQGHGRGR
RQGPSPKINKEDVRQVFRDLMKEEGAALLGPALQPLTAAAAAAPPPPPPS
PAIDDNKLQKCVSTEVARQLRAYGPQGQPATEEERTAAAARGAVP*
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Synonyms
Publications