NO14G03120, NO14G03120 (gene) Nannochloropsis oceanica

Overview
NameNO14G03120
Unique NameNO14G03120
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1897
Alignment locationchr14:930588..933625 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:930588..933625 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR035965PAS-like_dom_sf
IPR000014PAS
Homology
The following BLAST results are available for this feature:
BLAST of NO14G03120 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G03120.1NO14G03120.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G03120.2NO14G03120.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G03120.3NO14G03120.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G03120.1NO14G03120.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G03120.2NO14G03120.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G03120.3NO14G03120.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G03120 ID=NO14G03120|Name=NO14G03120|organism=Nannochloropsis oceanica|type=gene|length=1897bp
ATGTGTTCTCTCTGCTTCGTGTCATCAACGGGTGGACAGCTGCCTCCTCT
GTCTCGCTCTCTATCGTTCGCTATAACTCTTCTCCTTCCCTCCATCTCTG
CATTCCCACACAATGGCAGCACGTCTTCATCCTCCATCGCCAACACCCTA
AGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGCAAG
TATGTTTCATTCTCCTCCTCCCACCCGAGCAGCCTCCGCCGCCTTCCTTC
TCCTTCCTCCTCCTCCTCCACTCAAGGAGGAGGTCTGGACGGAGGACGAG
GATGAGGATGAGGGAGGGGAAACGGATCAATGTACGGCCATGACGAGCAG
CGAGGAGGAGAATGATGACGGGATGGAGGAAGAGGAAATGGGCATGTATT
TTAGCGAGGCAGAAGACTGTGACGAGAGGGAAGAGGAAGTAGGAATGCAT
TTTAGCGATGCGCAAAGTGGTGACGAGGAGGAAGGAGAGGAGGAGGAGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGTGGTGATGAAGCGGC
CCGATGGCTCGCTGCTTCTTCTTTCTGACTCTCGATGGACTCGATCGGGG
CACAAGCGGGAAAGGCAAGGAGGGTGGATGCCCTTTTCCCCGACTCCTTC
GCTTGCAATTTCGGGGAGGGAGGGGCAGAGGGAGGGAGAAAGGGAGGAAG
GACGGTTTTTGGTACCCACCACGATGACGGCGGCGTTGGAGTTAAACGTG
TGTGATCAATGCGTGATGCTAACAGAGgtgagggaggagggagggaggga
gggacgatagggggtcgagaaggaagagctttaaaaatgttacttctcaa
cagtagtgttattcatgtttctctccctctctccctccccctctcctccc
tccctccctccctcccttcccccctcgctagGTCACTTGCCCCTTTCGGG
TATTACATGCCAACAAGCAGTTCACGATCACCACTGGCTTCCACTTGCAT
GAGATAGCCGGACGCGGCCCCGGTGAAGTTCTGGTGgtaggtgacggggg
aaggagggatatgtgatgggtgagggggaatatatatgggaggtagggca
tagtgtgatggtgtgtgcctttccccccactatagcgacttgtccatttg
aaatacttttattcttttattcttcatactatgcagtcaagcactagtca
cttatttatctgtatatttattttgtttttttaatcacttttgttcgttt
attgattttattcacattgtatgaatacagtatatttatgcttatatata
aatattgtcttcatacaatgtgaataaaatctatatttatatatatatat
ataaatatattgtattcatacaagtaaatgaaatcaatacatatatatgt
tgagattgaaattgatgcggtgaattcatgtatgatttcgtactttccta
cagGGGCCTGATTCGGACGTGGTCTCTTTCCAGGCGGCGATGGAGGAGGC
AGCAACCACTGGATTTGCACGGGGGAGGACGgtaaggagcaaggagagga
agggaaggaggggaggaagggaaggagaggaggaagaagatagaagggtg
gaaggggggcaggaaaagattagactgtatgctgtatgtttttcgtatta
tagcataaagattagtgcatccgtgcactcacccctccctctccccctac
ccatatacccaattcagGTTTCCTACACCCGCGACGGCCGTCCCTTCACC
CACTCCTATCGTGCCGTTCCGATCCTTAGCCACCCCTGCCCTACCTCCAG
GTATATCCCCTCCCTTTTCCCGTTCTCCCTCCCTCTTTCCTTCTCTCCCT
CCCCTTTGACATAAATCTTAAATTTCGTAGCTTTCTAATTACTCCCT
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protein sequence of NO14G03120.1

>NO14G03120.1-protein ID=NO14G03120.1-protein|Name=NO14G03120.1|organism=Nannochloropsis oceanica|type=polypeptide|length=304bp
MCSLCFVSSTGGQLPPLSRSLSFAITLLLPSISAFPHNGSTSSSSIANTL
SSSNNSSSSSSSSSSASMFHSPPPTRAASAAFLLLPPPPPLKEEVWTEDE
DEDEGGETDQCTAMTSSEEENDDGMEEEEMGMYFSEAEDCDEREEEVGMH
FSDAQSGDEEEGEEEEEEEEEEEEEEEEVVMKRPDGSLLLLSDSRWTRSG
HKRERQGGWMPFSPTPSLAISGREGQREGEREEGRFLVPTTMTAALELNV
CDQCVMLTEVTCPFRVLHANKQFTITTGFHLHEIAGRGPGEVLVVGDGGR
RDM*
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protein sequence of NO14G03120.2

>NO14G03120.2-protein ID=NO14G03120.2-protein|Name=NO14G03120.2|organism=Nannochloropsis oceanica|type=polypeptide|length=369bp
MCSLCFVSSTGGQLPPLSRSLSFAITLLLPSISAFPHNGSTSSSSIANTL
SSSNNSSSSSSSSSSASMFHSPPPTRAASAAFLLLPPPPPLKEEVWTEDE
DEDEGGETDQCTAMTSSEEENDDGMEEEEMGMYFSEAEDCDEREEEVGMH
FSDAQSGDEEEGEEEEEEEEEEEEEEEEVVMKRPDGSLLLLSDSRWTRSG
HKRERQGGWMPFSPTPSLAISGREGQREGEREEGRFLVPTTMTAALELNV
CDQCVMLTEVTCPFRVLHANKQFTITTGFHLHEIAGRGPGEVLVGPDSDV
VSFQAAMEEAATTGFARGRTVSYTRDGRPFTHSYRAVPILSHPCPTSRYI
PSLFPFSLPLSFSPSPLT*
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protein sequence of NO14G03120.3

>NO14G03120.3-protein ID=NO14G03120.3-protein|Name=NO14G03120.3|organism=Nannochloropsis oceanica|type=polypeptide|length=412bp
MCSLCFVSSTGGQLPPLSRSLSFAITLLLPSISAFPHNGSTSSSSIANTL
SSSNNSSSSSSSSSSASMFHSPPPTRAASAAFLLLPPPPPLKEEVWTEDE
DEDEGGETDQCTAMTSSEEENDDGMEEEEMGMYFSEAEDCDEREEEVGMH
FSDAQSGDEEEGEEEEEEEEEEEEEEEEVVMKRPDGSLLLLSDSRWTRSG
HKRERQGGWMPFSPTPSLAISGREGQREGEREEGRFLVPTTMTAALELNV
CDQCVMLTEVTCPFRVLHANKQFTITTGFHLHEIAGRGPGEVLVGPDSDV
VSFQAAMEEAATTGFARGRTVSYTRDGRPFTHSYRAVPILSHPCPTSSAP
APNKQLPGNTQGRGGRREGGGGRGGCVLRMTHLLWTMKVETERREGGREG
GEEEGILTGCM*
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Synonyms
Publications