NO14G03030, NO14G03030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_005351559.1 (PREDICTED: leucine-rich repeat-containing protein 56 [Microtus ochrogaster] >XP_005351560.1 PREDICTED: leucine-rich repeat-containing protein 56 [Microtus ochrogaster]) HSP 1 Score: 100.9 bits (250), Expect = 8.700e-18 Identity = 68/174 (39.08%), Postives = 91/174 (52.30%), Query Frame = 0 Query: 134 ALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGGGGE------YYRKVISSLVPQLRVLD 299 ALA V L L ++ + + LG+ LP+L L HS L SLRDLGT L HL +L L C LT LDG+ +F L ELY+S+N + DL+PL L ++L +LDL N L + L CPRL +LTL + + G YR + L+PQL +LD Sbjct: 63 ALAQVDDLQLVRVLEMCVDTRKNSLGNFGVHLPNLIQLKLNHSCLGSLRDLGTSLGHLQVLWLARCGLTDLDGIGSFLALKELYVSYNNISDLSPLCLLEQLEVLDLEGNNV----EDLGQMRYLQLCPRLATLTLEGNLVCLKPDPGPSNKAPQDYNYRAEVKKLIPQLHILD 232
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_015851538.1 (PREDICTED: leucine-rich repeat-containing protein 56 isoform X2 [Peromyscus maniculatus bairdii]) HSP 1 Score: 100.9 bits (250), Expect = 8.700e-18 Identity = 80/231 (34.63%), Postives = 108/231 (46.75%), Query Frame = 0 Query: 77 PAMRGDESAPSSTTASVTLTAAWLRQHCSCPSPSPLASTAEATTVEDGNPKNSDDIVALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDT-----PIKTALEGGGGEY-YRKVISSLVPQLRVLD 299 PA G + ST + +W + CP L S + S +ALA V L L ++ + + LG+ LP+L L HS L SLRDLGT L HL +L L C LT LDG+ +F L ELY+S+N + DL+PL L ++L +LDL N L + L CPRL +LTL P +Y YR + L+PQL +LD Sbjct: 5 PAWDGSQGPRPSTASIRVRELSWQGLNNPCPQNKRLGSHGDIHRERRVEEHLSPARLALARVDDLQLVRVLEMCVDTRKNSLGNFGVHLPNLIQLKLNHSCLGSLRDLGTSLGHLQVLWLARCGLTDLDGIGSFLALKELYVSYNNISDLSPLCLLEQLEVLDLEGNNV----EDLGQMRYLQLCPRLATLTLEGNLVCLKPDPDPSNKAPQDYNYRAEVKKLIPQLHILD 231
BLAST of NO14G03030 vs. NCBI_GenBank
Match: KFO26388.1 (Leucine-rich repeat-containing protein 56 [Fukomys damarensis]) HSP 1 Score: 100.5 bits (249), Expect = 1.100e-17 Identity = 63/143 (44.06%), Postives = 81/143 (56.64%), Query Frame = 0 Query: 162 LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDT-----PIKTALEGGGGEY-YRKVISSLVPQLRVLD 299 LP+L L T S L SLRDLGT L L +L L C L LDG+++FP L ELY+S+N + DL+PL L D+L +LDL N L + L CPRL +LTL P + + G Y YR + L+PQLR+LD Sbjct: 120 LPNLSQLKLTGSRLGSLRDLGTSLGRLQVLWLARCGLDDLDGISSFPALKELYVSYNNISDLSPLCLLDQLEVLDLEGNSL----EDLEQVRYLQLCPRLATLTLEGNLVCLQPAASPADKAPGCYNYRAEVRKLIPQLRILD 258
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_021501829.1 (leucine-rich repeat-containing protein 56 isoform X2 [Meriones unguiculatus]) HSP 1 Score: 100.5 bits (249), Expect = 1.100e-17 Identity = 80/234 (34.19%), Postives = 110/234 (47.01%), Query Frame = 0 Query: 77 PAMRGDESAPSSTTASVTLTAAWLRQHCSCPSPSPLASTA----EATTVEDGNPKNSDDIVALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGGGGE-----YYRKVISSLVPQLRVLD 299 PA G + T + +W + CP L S E E P + ALA V L L ++ + + LG+ LP+L L HS L SLRDLGT L HL +L L C LT LDG+ +F L ELY+S+N + DL+PL L ++L +LDL N L + L CPRL +LTL + + G + YR+ + L+PQL +LD Sbjct: 5 PAWDGSQGPRPGTASIRVRELSWQGLNNPCPQNKRLGSHGDIHREQRVDEHLTPAR---LQALAQVDDLQLVRVLEMCVDTRKNSLGNFGMHLPNLIQLKLNHSCLGSLRDLGTSLGHLQVLWLARCGLTDLDGIGSFLALKELYVSYNNISDLSPLCLLEQLEVLDLEGNNV----EDLGQMRYLQLCPRLATLTLEGNLVCLKPDAGPSKAPQDYNYREEVKKLIPQLHILD 231
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_021501826.1 (leucine-rich repeat-containing protein 56 isoform X1 [Meriones unguiculatus] >XP_021501828.1 leucine-rich repeat-containing protein 56 isoform X1 [Meriones unguiculatus]) HSP 1 Score: 100.5 bits (249), Expect = 1.100e-17 Identity = 80/234 (34.19%), Postives = 110/234 (47.01%), Query Frame = 0 Query: 77 PAMRGDESAPSSTTASVTLTAAWLRQHCSCPSPSPLASTA----EATTVEDGNPKNSDDIVALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGGGGE-----YYRKVISSLVPQLRVLD 299 PA G + T + +W + CP L S E E P + ALA V L L ++ + + LG+ LP+L L HS L SLRDLGT L HL +L L C LT LDG+ +F L ELY+S+N + DL+PL L ++L +LDL N L + L CPRL +LTL + + G + YR+ + L+PQL +LD Sbjct: 5 PAWDGSQGPRPGTASIRVRELSWQGLNNPCPQNKRLGSHGDIHREQRVDEHLTPAR---LQALAQVDDLQLVRVLEMCVDTRKNSLGNFGMHLPNLIQLKLNHSCLGSLRDLGTSLGHLQVLWLARCGLTDLDGIGSFLALKELYVSYNNISDLSPLCLLEQLEVLDLEGNNV----EDLGQMRYLQLCPRLATLTLEGNLVCLKPDAGPSKAPQDYNYREEVKKLIPQLHILD 231
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_021563693.1 (leucine-rich repeat-containing protein 56 [Carlito syrichta]) HSP 1 Score: 100.5 bits (249), Expect = 1.100e-17 Identity = 80/223 (35.87%), Postives = 107/223 (47.98%), Query Frame = 0 Query: 86 PSSTTASVTL-TAAWLRQHCSCPSPSPLASTAEATTVEDGNPKNSDDIVALAYVTHLSLTKIKDASAIV---DLDLLGDLLPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGG------GGEYYRKVISSLVPQLRVLD 299 P +TAS+ + +W H CP L S + + + ALA V L L ++ + L LG LP+L+ L S L SLRDLGT L L +L L C LT LDG+ + P L ELY S+N + +L+PL L +RL +LDL N L +H L CPRL +LTL + G G YR + L+PQL+VLD Sbjct: 11 PRPSTASIRVRELSWQGLHNPCPQSKSLGSHGDGGEWPVLEYLSPARLQALAQVDDLRLVRLLELRVDTREGSLGTLGMHLPNLDQLKLNGSHLGSLRDLGTSLGRLQVLWLARCGLTDLDGIGSLPALKELYASYNGVTELSPLCLLERLEVLDLEGNSV----EDLGQVHYLRLCPRLATLTLEGNRVCLQPAPGPCHKVPQGYNYRAEVRKLLPQLQVLD 229
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_008852611.1 (PREDICTED: leucine-rich repeat-containing protein 56 isoform X1 [Nannospalax galili] >XP_017659053.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X1 [Nannospalax galili] >XP_017659054.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X1 [Nannospalax galili]) HSP 1 Score: 100.1 bits (248), Expect = 1.500e-17 Identity = 68/174 (39.08%), Postives = 91/174 (52.30%), Query Frame = 0 Query: 134 ALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGG------GGEYYRKVISSLVPQLRVLD 299 ALA V L L ++ + + LG+ LP+L L HS L SLRDLGT L HL +L L C LT LDG+ +F L ELY+S+N + DL+PL L ++L +LDL N L + L CP+L +LTL + G G YR + L+PQL +LD Sbjct: 61 ALAQVDDLQLVRVLEMCVDTRKNSLGNFGVHLPNLIQLKLNHSCLDSLRDLGTSLGHLQVLWLACCGLTDLDGIGSFLALKELYVSYNNISDLSPLCLLEKLEVLDLEGNNV----EDLGQMRYLQLCPQLATLTLEGNLVCLKPAPGPSNKAPKGYNYRAEVRKLIPQLHILD 230
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_023420028.1 (LOW QUALITY PROTEIN: leucine-rich repeat-containing protein 56 [Cavia porcellus]) HSP 1 Score: 99.8 bits (247), Expect = 1.900e-17 Identity = 74/210 (35.24%), Postives = 101/210 (48.10%), Query Frame = 0 Query: 99 WLRQHCSCPSPSPLASTAEATTVED-GNPKNSDDIVALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPI------KTALEGGGGEYYRKVISSLVPQLRVLD 299 W H CP L ++ P + + ALA V L ++ + LG+ LP+L L T S L SLRDLGT L+HL +L L C LT LDG+ +FP L E Y+S+N + DL+PL L D+L +LDL N L + L CP+L +L L + A + G YR + L+PQLR+LD Sbjct: 43 WQGLHNPCPQSKGLDRPQDSHRERQIEEPLSPVHLQALARVDDLQSVQVLEMCVDTREHSLGNFGVYLPNLSQLRLTGSRLDSLRDLGTSLSHLQVLWLARCGLTDLDGIGSFPALKEFYVSYNDISDLSPLCLLDQLEVLDLEGNSL----EDLGQVRYLQLCPQLTTLILEGNLVCLQPAAGPASKAPGCYNYRSEVKKLIPQLRILD 248
BLAST of NO14G03030 vs. NCBI_GenBank
Match: OWK10646.1 (hypothetical protein Celaphus_00004977 [Cervus elaphus hippelaphus]) HSP 1 Score: 99.8 bits (247), Expect = 1.900e-17 Identity = 75/194 (38.66%), Postives = 95/194 (48.97%), Query Frame = 0 Query: 134 ALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGGG-------GEYYRKVISSLVPQLRVLDGRKVGGGGXXXREGERKDW 318 ALA L L + + + LG LP+L L S L SLRDLGT L HL +L L C L LDG+++FP L ELYLS+N + DL+PL L ++L +LDL N L L L CPRL +LTL P+ G G G YR + L+PQL+VLD G +DW Sbjct: 61 ALAQEDDLQLVSVLEMCVNTRENSLGSFGLHLPNLSQLKLNGSCLGSLRDLGTSLGHLQVLWLARCGLADLDGISSFPALKELYLSYNDIWDLSPLCLLEQLEVLDLEGN----CVEDLGQLRYLQLCPRLATLTLEGNPL-CLWPGPGPTHQVPRGYNYRAEVRKLIPQLQVLDELPAAHTGLPASRKLDQDW 249
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_023578531.1 (leucine-rich repeat-containing protein 56 isoform X2 [Octodon degus]) HSP 1 Score: 99.8 bits (247), Expect = 1.900e-17 Identity = 80/231 (34.63%), Postives = 108/231 (46.75%), Query Frame = 0 Query: 77 PAMRGDESAPSSTTASVTLTAAWLRQHCSCPSPSPLASTAEATTVEDGNPKNSDDIVALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPI------KTALEGGGGEYYRKVISSLVPQLRVLD 299 PA +G T+ +W H CP L ++ + S +ALA V L ++ + LG+ LP+L L T S L SLRDLGT L HL +L L C LT LDG+ +FP L ELY+S+N + DL+PL L D+L +LDL N L + L CP+L +LTL + A + YR + LVPQLR+LD Sbjct: 3 PARKGRPGLWPHFTSVQVRELSWQGPHNPCPQSKGLNRLQDSHKEQRVEEPLSPAHLALAQVDDLRTVQVLEMCVDTREHSLGNFGVYLPNLSQLKLTGSRLGSLRDLGTSLGHLQVLWLARCGLTDLDGIGSFPGLKELYISYNDISDLSPLCLLDQLEVLDLEGNNL----EDLGQVRYLQLCPQLATLTLEGNLVCLQPASDPANKAPECYNYRAEVKKLVPQLRILD 229 The following BLAST results are available for this feature:
BLAST of NO14G03030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G03030 ID=NO14G03030|Name=NO14G03030|organism=Nannochloropsis oceanica|type=gene|length=2475bpback to top protein sequence of NO14G03030.1 >NO14G03030.1-protein ID=NO14G03030.1-protein|Name=NO14G03030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=369bpback to top Synonyms
Publications
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