NO14G03030, NO14G03030 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_005855433.1 (leucine rich repeat containing 56 [Nannochloropsis gaditana CCMP526] >EKU20926.1 leucine rich repeat containing 56 [Nannochloropsis gaditana CCMP526] >EWM24504.1 hypothetical protein Naga_100796g3 [Nannochloropsis gaditana]) HSP 1 Score: 241.5 bits (615), Expect = 4.100e-60 Identity = 145/290 (50.00%), Postives = 189/290 (65.17%), Query Frame = 0 Query: 55 WNDRRRQAAAQRIAASLSLPS-TPAMRGDESAPSSTTASVTLTAAWLRQHCSCPSPSPLASTAEATTVEDGNPKNSDDIVALAYVTHLSLTKIKDASAIVDLDLLGDLLPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGGG-----GEYYRKVISSLVPQLRVLDGRKVGGGGXXXREGERKDWGEEEEMDEVAWQSVMTRLQAL 339 WN+RRR AAA+R+AAS S S P D +A TLTAAWLR+H C S + E T + +N VTHLSLT+ D I +L+ LG+LLPSLES S THS L SLRDLG+ L HL +LDLT+C+L LDG+AAFPLL E+YLSHNLLRDLTPL LHD L+ILD++HN YL LP S+APLH+LASC + +L++++TP++ AL+ YRK++ SL+PQL VLDG+K+ KD GEE+++DE AW++V+ LQ + Sbjct: 18 WNERRRLAAARRLAASYSSSSLRPVSPKDNNA-------TTLTAAWLRKHYKCAS---VPMWTEDTDEHEDTLRN---------VTHLSLTRSTDTPDITNLETLGELLPSLESFSLTHSCLSSLRDLGSRLGHLRVLDLTACNLQCLDGMAAFPLLEEVYLSHNLLRDLTPLFLHDHLTILDISHNLYLRLPSSMAPLHVLASCKNMHTLSMKETPVERALQNLAIGSKIDSSYRKIVGSLIPQLHVLDGKKL--------PKSEKD-GEEQDIDEAAWRNVVLLLQKM 279
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_005227459.1 (PREDICTED: leucine-rich repeat-containing protein 56 [Bos taurus] >XP_010819595.1 PREDICTED: leucine-rich repeat-containing protein 56 [Bos taurus] >XP_010819596.1 PREDICTED: leucine-rich repeat-containing protein 56 [Bos taurus] >XP_015316864.1 PREDICTED: leucine-rich repeat-containing protein 56 [Bos taurus] >XP_015325608.1 PREDICTED: leucine-rich repeat-containing protein 56 [Bos taurus] >XP_010807235.2 PREDICTED: leucine-rich repeat-containing protein 56 [Bos taurus] >XP_015325609.1 PREDICTED: leucine-rich repeat-containing protein 56 [Bos taurus] >XP_015325610.1 PREDICTED: leucine-rich repeat-containing protein 56 [Bos taurus]) HSP 1 Score: 104.4 bits (259), Expect = 7.800e-19 Identity = 75/193 (38.86%), Postives = 98/193 (50.78%), Query Frame = 0 Query: 134 ALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGG------GGEYYRKVISSLVPQLRVLDGRKVGGGGXXXREGERKDW 318 ALA V L L + + LG L LP+L L S L SLRDLGT L+HL +L T CSLT L+ +++FP L ELYLS+N + DL+PL L ++L +LDL N L L L CP+L +LTL P+ G G YR + L+PQL+VLD G + +DW Sbjct: 61 ALAQVDDLRLVSMLEMCVNTRESSLGSLGLHLPNLSQLKLNGSCLGSLRDLGTSLSHLQVLSQTRCSLTDLESISSFPALKELYLSYNNIWDLSPLCLLEQLEVLDLEGN----CVEDLGQLRYLQLCPQLATLTLEGNPLCLRPGSGPTHQVPQGYNYRAEVRKLIPQLQVLDELPAAHTGLPASQKLDQDW 249
BLAST of NO14G03030 vs. NCBI_GenBank
Match: ELR56834.1 (Leucine-rich repeat-containing protein 56, partial [Bos mutus]) HSP 1 Score: 104.0 bits (258), Expect = 1.000e-18 Identity = 75/193 (38.86%), Postives = 97/193 (50.26%), Query Frame = 0 Query: 134 ALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGG------GGEYYRKVISSLVPQLRVLDGRKVGGGGXXXREGERKDW 318 ALA V L L + + LG L LP+L L S L SLRDLGT L+HL +L L C L LDG+++FP L ELYLS+N + DL+PL L ++L +LDL N L L L CP+L +LTL P+ G G YR + L+PQL+VLD G + +DW Sbjct: 61 ALAQVDDLRLVSMLEMCVNTRESSLGSLGLHLPNLSQLKLNGSCLGSLRDLGTSLSHLQVLWLARCGLADLDGISSFPALKELYLSYNNIWDLSPLCLLEQLEVLDLEGN----CVEDLGQLRYLQLCPKLATLTLEGNPLCLRPGSGPTHQVPQGYNYRAEVRKLIPQLQVLDELPAAHTGLPASQKLDQDW 249
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_005895197.1 (PREDICTED: leucine-rich repeat-containing protein 56 [Bos mutus]) HSP 1 Score: 104.0 bits (258), Expect = 1.000e-18 Identity = 75/193 (38.86%), Postives = 97/193 (50.26%), Query Frame = 0 Query: 134 ALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGG------GGEYYRKVISSLVPQLRVLDGRKVGGGGXXXREGERKDW 318 ALA V L L + + LG L LP+L L S L SLRDLGT L+HL +L L C L LDG+++FP L ELYLS+N + DL+PL L ++L +LDL N L L L CP+L +LTL P+ G G YR + L+PQL+VLD G + +DW Sbjct: 61 ALAQVDDLRLVSMLEMCVNTRESSLGSLGLHLPNLSQLKLNGSCLGSLRDLGTSLSHLQVLWLARCGLADLDGISSFPALKELYLSYNNIWDLSPLCLLEQLEVLDLEGN----CVEDLGQLRYLQLCPKLATLTLEGNPLCLRPGSGPTHQVPQGYNYRAEVRKLIPQLQVLDELPAAHTGLPASQKLDQDW 249
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_013358376.1 (PREDICTED: leucine-rich repeat-containing protein 56 [Chinchilla lanigera]) HSP 1 Score: 102.8 bits (255), Expect = 2.300e-18 Identity = 82/232 (35.34%), Postives = 112/232 (48.28%), Query Frame = 0 Query: 80 RGDESAPSSTTASVTL-TAAWLRQHCSCPSPSPLASTAEA---TTVEDGNPKNSDDIVALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGGGGE------YYRKVISSLVPQLRVLD 299 R P +ASV + +W +H CP L ++ VE+ P + + ALA V L ++ + LG+ LP+L L T S L SLRDLGT L HL +L L C L LDG+ +FP+L ELY+S+N + DL+PL L D+L +LDL N L + L CPRL +LTL + G YR + L+PQLR+LD Sbjct: 23 RDGRPGPRPHSASVQVRELSWQGRHNPCPQSKGLDRPQDSHRERRVEE--PLSPAHLQALAQVDDLRSVQVLEMCVDTREHSLGNFGVHLPNLSQLKLTGSRLGSLRDLGTSLGHLQVLWLARCGLADLDGIGSFPVLKELYVSYNDISDLSPLCLLDQLEVLDLEGNSL----EDLGQVRYLQLCPRLATLTLEGNMVCLQPAAGPANKAPRSYNYRAEVKKLIPQLRILD 248
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_007947555.1 (PREDICTED: leucine-rich repeat-containing protein 56 [Orycteropus afer afer]) HSP 1 Score: 102.8 bits (255), Expect = 2.300e-18 Identity = 63/145 (43.45%), Postives = 83/145 (57.24%), Query Frame = 0 Query: 162 LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGGGGE--------YYRKVISSLVPQLRVLD 299 LP+L L S L S+RDLGT L HL +L L C L LDG+++FP L ELY+S+N + DL+PL L ++L +LDL N L +H L CPRL +LTL P+ L+ G G YR + L+PQL+VLD Sbjct: 23 LPNLSQLKLNGSCLASVRDLGTSLGHLQVLWLACCGLPDLDGISSFPALKELYVSYNNVSDLSPLCLLEQLEVLDLEGNSV----EDLGQVHYLRLCPRLATLTLEGNPV--CLQPGPGPSNKAPQGYNYRAEVRKLIPQLQVLD 161
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_007108749.1 (leucine-rich repeat-containing protein 56 [Physeter catodon]) HSP 1 Score: 101.7 bits (252), Expect = 5.100e-18 Identity = 73/174 (41.95%), Postives = 92/174 (52.87%), Query Frame = 0 Query: 134 ALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGG------GGEYYRKVISSLVPQLRVLD 299 ALA V L L + + + LG+ LP+L L S L SLRDLGT L L +L L C L LDG+ +FP L ELYLS+N + DL+PL L ++L +LDL N V P LH L CPRL +LTL P+ G G YR + L+PQL+VLD Sbjct: 61 ALAQVDDLRLVSVLELCVNTHENSLGNFGLHLPNLSQLKLNGSRLGSLRDLGTSLGRLQVLWLARCGLADLDGIGSFPALKELYLSYNDVSDLSPLCLLEQLEVLDLEGN--CVEDP--GQLHYLQLCPRLATLTLEGNPLCLRPGPGPTHQVPRGYNYRAEVRKLIPQLQVLD 230
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_006045820.1 (PREDICTED: leucine-rich repeat-containing protein 56 isoform X1 [Bubalus bubalis] >XP_006045821.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X2 [Bubalus bubalis] >XP_006045822.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X3 [Bubalus bubalis] >XP_006045823.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X4 [Bubalus bubalis] >XP_006045824.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X5 [Bubalus bubalis] >XP_006045825.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X6 [Bubalus bubalis] >XP_006045826.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X7 [Bubalus bubalis] >XP_006045827.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X8 [Bubalus bubalis] >XP_006045828.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X9 [Bubalus bubalis] >XP_006045829.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X10 [Bubalus bubalis] >XP_006045830.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X11 [Bubalus bubalis] >XP_006045831.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X12 [Bubalus bubalis] >XP_006045832.1 PREDICTED: leucine-rich repeat-containing protein 56 isoform X13 [Bubalus bubalis]) HSP 1 Score: 101.3 bits (251), Expect = 6.600e-18 Identity = 77/193 (39.90%), Postives = 96/193 (49.74%), Query Frame = 0 Query: 134 ALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGG------GGEYYRKVISSLVPQLRVLDGRKVGGGGXXXREGERKDW 318 ALA V L L + + LG L LP+L L S L SLRDLGT L HL +L L C L LDG+++FP L ELYLS+N + DL+PL L ++L +LDL N V P L L CPRL +LTL P+ G G YR + L+PQL+VLD G +DW Sbjct: 61 ALAQVDDLRLVSVLEMCVNTRESSLGSLGLHLPNLSQLKLNGSCLGSLRDLGTSLGHLQVLWLARCGLADLDGISSFPALKELYLSYNDIWDLSPLCLLEQLEVLDLEGN--CVEDP--GQLRYLQLCPRLATLTLEGNPLCLRPGSGPTHQVPQGYSYRAEVRKLIPQLQVLDELPAAHTGQPASRTLDQDW 249
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_006045833.1 (PREDICTED: leucine-rich repeat-containing protein 56 isoform X14 [Bubalus bubalis]) HSP 1 Score: 101.3 bits (251), Expect = 6.600e-18 Identity = 77/193 (39.90%), Postives = 96/193 (49.74%), Query Frame = 0 Query: 134 ALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGG------GGEYYRKVISSLVPQLRVLDGRKVGGGGXXXREGERKDW 318 ALA V L L + + LG L LP+L L S L SLRDLGT L HL +L L C L LDG+++FP L ELYLS+N + DL+PL L ++L +LDL N V P L L CPRL +LTL P+ G G YR + L+PQL+VLD G +DW Sbjct: 61 ALAQVDDLRLVSVLEMCVNTRESSLGSLGLHLPNLSQLKLNGSCLGSLRDLGTSLGHLQVLWLARCGLADLDGISSFPALKELYLSYNDIWDLSPLCLLEQLEVLDLEGN--CVEDP--GQLRYLQLCPRLATLTLEGNPLCLRPGSGPTHQVPQGYSYRAEVRKLIPQLQVLDELPAAHTGQPASRTLDQDW 249
BLAST of NO14G03030 vs. NCBI_GenBank
Match: XP_006045834.1 (PREDICTED: leucine-rich repeat-containing protein 56 isoform X15 [Bubalus bubalis]) HSP 1 Score: 101.3 bits (251), Expect = 6.600e-18 Identity = 77/193 (39.90%), Postives = 96/193 (49.74%), Query Frame = 0 Query: 134 ALAYVTHLSLTKIKDASAIVDLDLLGDL---LPSLESLSFTHSGLPSLRDLGTGLTHLLILDLTSCSLTALDGLAAFPLLHELYLSHNLLRDLTPLLLHDRLSILDLAHNPYLVLPPSLAPLHILASCPRLCSLTLRDTPIKTALEGG------GGEYYRKVISSLVPQLRVLDGRKVGGGGXXXREGERKDW 318 ALA V L L + + LG L LP+L L S L SLRDLGT L HL +L L C L LDG+++FP L ELYLS+N + DL+PL L ++L +LDL N V P L L CPRL +LTL P+ G G YR + L+PQL+VLD G +DW Sbjct: 61 ALAQVDDLRLVSVLEMCVNTRESSLGSLGLHLPNLSQLKLNGSCLGSLRDLGTSLGHLQVLWLARCGLADLDGISSFPALKELYLSYNDIWDLSPLCLLEQLEVLDLEGN--CVEDP--GQLRYLQLCPRLATLTLEGNPLCLRPGSGPTHQVPQGYSYRAEVRKLIPQLQVLDELPAAHTGQPASRTLDQDW 249 The following BLAST results are available for this feature:
BLAST of NO14G03030 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G03030 ID=NO14G03030|Name=NO14G03030|organism=Nannochloropsis oceanica|type=gene|length=2475bpback to top protein sequence of NO14G03030.1 >NO14G03030.1-protein ID=NO14G03030.1-protein|Name=NO14G03030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=369bpback to top Synonyms
Publications
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