NO14G02620, NO14G02620 (gene) Nannochloropsis oceanica

Overview
NameNO14G02620
Unique NameNO14G02620
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1341
Alignment locationchr14:779637..780977 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:779637..780977 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO14G02620 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02620.1NO14G02620.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02620.1NO14G02620.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02620 ID=NO14G02620|Name=NO14G02620|organism=Nannochloropsis oceanica|type=gene|length=1341bp
ATGGCGGTGGTGAGGTTGCTCTTGGCGTTGAGTGGGAGCGAGGACAGGTA
TCAACAGCGGTTGGCCTTGGTGCTGCTGAGAGAGCATGATGATGTGCGGC
AGCCGTTTATGCGACGCTTTAATCAGACGTGGGAGGCCAAGGGTAATTGG
AGCGGTCTTACTTCCTATGTGTTTGTTGCGAAAATAGTTAGGGCTTGTGA
AGGAAGGGGAGGAGGGAGGAGGAGGGAAGGGGGAGAGAGGGAGGGAGGGG
CGGAGAGGCTGTTGGGAGGGATGCTGCCATCGGGGATGGGGAAGCGCGAG
TTGACCAAAGCGATCCTGAGTGCGAACCCTCTGCTGGCACGGATGGGGCT
GCTCCTCACCATACAATTGCTACGACGGGCGCAGCCAGTCATGGGAGCTT
TTTCCTCTTCCTGTGGGCAGCAGCAACAACAACAAAAACAGCAGCAGCAG
CAGCAGCAGACGGCAGCCTTGCGTCGCGCCCTTCGTCACCGACTGCCCGA
CCTTCAAGCAGTGCTCGCCGTCAAAGCCCGCTGCTGCTCCTCCTCCTCGT
CCTCCTCCGCCTCCTCCTCGTCCTCCCTCCCCCCCTGGCGACACCACCTC
CTCGCCCTCGTCCTCGCCCTCCTTCGTACCTACCACACGGTCCTACCCGA
AGCCATCAATGCAGTCCGTTTCGACTTCCTCCGTCTCGTCCATGACATTC
TCCCCCCTTCCTTCCTCTCGCCGTCCCTCCCTTCCTCTCCTCCTGCCTTT
GTTCAATGGGAGCTTTTGCGTCTCCTGAAGCACCTCGGCCCAGCACACCT
CGCGTGGCTTCCGGCAGACACACAACAAGTGTGGGGCAGCAACAGCAGCA
ACAGTAGCACCAGCACCAAGGGCAAGAGCAGCAACAGTAGCACCAGCACC
AGCGACAGTGCCTGGGGTCCGCCCACGGCATTCACCCATCTCCTCACCCT
CCTTCGTACCACCACCGACGAGCGCATTTATTCGCTTACCCGTGATGTGA
TCCTTGATGTCATCCAGCACAAAGTCCGCCCTCCCTCCCTCGCTGCCTCC
TCCCCTTCCTCCCCTTCCCCAGACGCAGAAGGAGGTCCCGAGGGAGGAAA
CGAAGGAGGGAGGGAGGGAGGGGCTTCACGCTCCATTCTGTTGGGTGAAA
GGCTGTTGGATGCGTTGGAAGGAGGAGGAGGGTCGGTGTGTGTCTTAGAG
GCAGCGTTGCGTCTGGCGGCGAATCGACCGTACCCGTTGTGGTTGGTAGC
GCTTAAGATTGCTGGAGATGAAGGACGAGGAGAAGGAGGGGGGGGGGGGC
GGGGTTTTCCTTGCCCTCCCTCCCGCCCTCTCCTGTCCTAG
back to top

protein sequence of NO14G02620.1

>NO14G02620.1-protein ID=NO14G02620.1-protein|Name=NO14G02620.1|organism=Nannochloropsis oceanica|type=polypeptide|length=447bp
MAVVRLLLALSGSEDRYQQRLALVLLREHDDVRQPFMRRFNQTWEAKGNW
SGLTSYVFVAKIVRACEGRGGGRRREGGEREGGAERLLGGMLPSGMGKRE
LTKAILSANPLLARMGLLLTIQLLRRAQPVMGAFSSSCGQQQQQQKQQQQ
QQQTAALRRALRHRLPDLQAVLAVKARCCSSSSSSSASSSSSLPPWRHHL
LALVLALLRTYHTVLPEAINAVRFDFLRLVHDILPPSFLSPSLPSSPPAF
VQWELLRLLKHLGPAHLAWLPADTQQVWGSNSSNSSTSTKGKSSNSSTST
SDSAWGPPTAFTHLLTLLRTTTDERIYSLTRDVILDVIQHKVRPPSLAAS
SPSSPSPDAEGGPEGGNEGGREGGASRSILLGERLLDALEGGGGSVCVLE
AALRLAANRPYPLWLVALKIAGDEGRGEGGGGGRGFPCPPSRPLLS*
back to top
Synonyms
Publications