NO14G02570, NO14G02570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G02570 vs. NCBI_GenBank
Match: EWM24554.1 (ddb1- and cul4-associated factor 11 isoform 1 [Nannochloropsis gaditana]) HSP 1 Score: 343.2 bits (879), Expect = 1.100e-90 Identity = 179/284 (63.03%), Postives = 209/284 (73.59%), Query Frame = 0 Query: 100 KFNMNHLFYRETHGAGNLGPHHRFVRAALNGVNLHPTSLAGAVGGFQSALFSASFSRDGQMVFTACQDGTINLYDLDQLLYAQAQHQHRLSLPMAGGRSA-PRMYSGXXXXXXXXXXXXXXXXXXXIRPKKRIRCQDIGWSIVGSAFSPDAKWIAYSSWSRYLHLTNTFGQHELHERVSVSPHRSANFCLFSLAFSADGAQVIGGGNDGCLHLIQLERKAVSRIEQAHYDDVNTVCFVDPVHSPSLVLSGADDGLIKLWDLRTEGAVGLLAGHTSGITNVCSKD 383 K + N + +RE +G + AA +G + +P LAGAV GF+SALF+ASFSRDGQM+FTACQDGTINLY ++QLLY QA+ + R + GG +A P S + P+K+I CQ +GW+IVGS FSPDAKWIAYSSWSR LHLTNTFG+HELHE + VSPHRS +FCLFSLAFSADGA+VIGGGNDG LHLI LERK S IEQAH DDVN+VCFVDP +PSLVLSG+DDGLIKLWDLRTE A GLLAGH SGIT+VCSKD Sbjct: 120 KVSGNPMLWREAYGP-RVVRRLSLAYAAADGAHFYPNLLAGAVSGFESALFNASFSRDGQMLFTACQDGTINLYGMEQLLYVQARCKVRET--EGGGTTAEPFQVSA---------SCPTPQAPDRLLPQKQIHCQYVGWAIVGSCFSPDAKWIAYSSWSRSLHLTNTFGRHELHEAIVVSPHRSHHFCLFSLAFSADGAKVIGGGNDGGLHLIHLERKHASHIEQAHQDDVNSVCFVDPEQAPSLVLSGSDDGLIKLWDLRTERAHGLLAGHVSGITSVCSKD 391
BLAST of NO14G02570 vs. NCBI_GenBank
Match: CBN80080.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 176.4 bits (446), Expect = 1.800e-40 Identity = 103/263 (39.16%), Postives = 141/263 (53.61%), Query Frame = 0 Query: 130 GVNLHPTSLAGAVGGFQSALFSASFSRDGQMVFTACQDGTINLYDLDQLL-----YAQAQHQHRLSLP-MAGG---RSAPRMYSGXXXXXXXXXXXXXXXXXXXIRPKKRIRCQDIGWSIVGSAFSPDAKWIAYSSWSRYLHLTNTFGQHELHERVSVSPHRSANFCLFSLAFSADGAQVIGGGNDGCLHLIQLERK-AVSRIEQAHYDDVNTVCFVDPVHSPSLVLSGADDGLIKLWDLRT-EGAVGLLAGHTSGITNVCSK 382 G + P + +G Q +F FS G ++ TA QD INLYD + + A + +R P G S R++ G +P K IRC D WS++ + FSPD KW+AYSSWS Y+HL NT G +ELH+ + P +FCLF++ FS ++GGG+D ++L LERK V+RI AH DDVN V F D +VLSG DD +IK+WDLR+ + AVG L GH +GIT + +K Sbjct: 201 GGSFIPNTFCRPLGRSQQKMFCGRFSTSGDVLLTASQDSVINLYDSESVYRWSAKSADPEENYRDEFPGFTRGMFRSSRRRLWHGAP------------------KPLKTIRCLDTAWSVISTDFSPDEKWLAYSSWSPYVHLCNTRGDYELHQALDFQPKPGDSFCLFAIQFSPSNTHILGGGSDNHVYLYSLERKERVARI-SAHDDDVNAVAFAD--SGSQVVLSGGDDCVIKIWDLRSPDAAVGGLCGHQAGITCITAK 442
BLAST of NO14G02570 vs. NCBI_GenBank
Match: XP_011670539.1 (PREDICTED: DDB1- and CUL4-associated factor 11 isoform X2 [Strongylocentrotus purpuratus]) HSP 1 Score: 162.5 bits (410), Expect = 2.600e-36 Identity = 83/245 (33.88%), Postives = 122/245 (49.80%), Query Frame = 0 Query: 142 VGGFQSALFSASFSRDGQMVFTACQDGTINLYDLDQLLYAQAQHQHRLSLPMAGGRSAPRMYSGXXXXXXXXXXXXXXXXXXXIRPKKRIRCQDIGWSIVGSAFSPDAKWIAYSSWSRYLHLTNTFGQHELHERVSVSPHRSANFCLFSLAFSADGAQVIGGGNDGCLHLIQLERKAVSRIEQAHYDDVNTVCFVDPVHSPSLVLSGADDGLIKLWDLR-----TEGAVGLLAGHTSGITNVCSK 382 V F +F ++S DG + +ACQD I LYD+ + K IR +D+GWSI+ +AFSPD ++ YSSWS +HL N +G+ E H + +SP+ +FC FS+ FS DG++++ G NDGCL++ E+ + ++H DDV+ VCF D S ++ SGADDG+ K+WD R + +G AGH GIT + SK Sbjct: 138 VAHFPGKVFCGTYSMDGSVFLSACQDQNIRLYDVKN---------------------------------------------GYFKKFKEIRARDVGWSILDTAFSPDGNFVIYSSWSHSIHLCNIYGEDETHNSLDLSPYTEGHFCAFSIRFSNDGSEILAGANDGCLYVYDREKNERTMRIESHEDDVSAVCFAD--QSSQILFSGADDGMCKVWDRRMLDGCNDRPIGTFAGHFDGITYIDSK 335
BLAST of NO14G02570 vs. NCBI_GenBank
Match: XP_781997.3 (PREDICTED: DDB1- and CUL4-associated factor 11 isoform X1 [Strongylocentrotus purpuratus]) HSP 1 Score: 162.5 bits (410), Expect = 2.600e-36 Identity = 83/245 (33.88%), Postives = 122/245 (49.80%), Query Frame = 0 Query: 142 VGGFQSALFSASFSRDGQMVFTACQDGTINLYDLDQLLYAQAQHQHRLSLPMAGGRSAPRMYSGXXXXXXXXXXXXXXXXXXXIRPKKRIRCQDIGWSIVGSAFSPDAKWIAYSSWSRYLHLTNTFGQHELHERVSVSPHRSANFCLFSLAFSADGAQVIGGGNDGCLHLIQLERKAVSRIEQAHYDDVNTVCFVDPVHSPSLVLSGADDGLIKLWDLR-----TEGAVGLLAGHTSGITNVCSK 382 V F +F ++S DG + +ACQD I LYD+ + K IR +D+GWSI+ +AFSPD ++ YSSWS +HL N +G+ E H + +SP+ +FC FS+ FS DG++++ G NDGCL++ E+ + ++H DDV+ VCF D S ++ SGADDG+ K+WD R + +G AGH GIT + SK Sbjct: 139 VAHFPGKVFCGTYSMDGSVFLSACQDQNIRLYDVKN---------------------------------------------GYFKKFKEIRARDVGWSILDTAFSPDGNFVIYSSWSHSIHLCNIYGEDETHNSLDLSPYTEGHFCAFSIRFSNDGSEILAGANDGCLYVYDREKNERTMRIESHEDDVSAVCFAD--QSSQILFSGADDGMCKVWDRRMLDGCNDRPIGTFAGHFDGITYIDSK 336
BLAST of NO14G02570 vs. NCBI_GenBank
Match: XP_782058.3 (PREDICTED: DDB1- and CUL4-associated factor 11 [Strongylocentrotus purpuratus]) HSP 1 Score: 158.3 bits (399), Expect = 4.900e-35 Identity = 81/246 (32.93%), Postives = 122/246 (49.59%), Query Frame = 0 Query: 141 AVGGFQSALFSASFSRDGQMVFTACQDGTINLYDLDQLLYAQAQHQHRLSLPMAGGRSAPRMYSGXXXXXXXXXXXXXXXXXXXIRPKKRIRCQDIGWSIVGSAFSPDAKWIAYSSWSRYLHLTNTFGQHELHERVSVSPHRSANFCLFSLAFSADGAQVIGGGNDGCLHLIQLERKAVSRIEQAHYDDVNTVCFVDPVHSPSLVLSGADDGLIKLWDLRT-----EGAVGLLAGHTSGITNVCSK 382 +V F + +F ++S DG + +ACQD I +YD+ + K +R +D+GWS++ +AFSPD ++ YSSWS +HL N +G ++ H +++ P +FC FS+ FS D +++ G NDGCL++ E+ + ++H DDVN VCF D S ++ SG DDGL K+WD RT VG+LAGH GIT + SK Sbjct: 133 SVAHFPAKVFCGTYSMDGSVFLSACQDQVIRIYDVKN---------------------------------------------GYFKKFKEVRARDVGWSVLDTAFSPDGNYLIYSSWSECVHLCNIYGDYDTHTALNLRPSTEGHFCAFSIQFSNDNKEILAGANDGCLYIYDREKNDRTLRIESHEDDVNAVCFAD--GSSQILFSGGDDGLCKVWDRRTLSDSNTKPVGVLAGHMDGITYIDSK 331
BLAST of NO14G02570 vs. NCBI_GenBank
Match: XP_013410754.1 (DDB1- and CUL4-associated factor 11 isoform X1 [Lingula anatina]) HSP 1 Score: 156.0 bits (393), Expect = 2.400e-34 Identity = 85/246 (34.55%), Postives = 120/246 (48.78%), Query Frame = 0 Query: 142 VGGFQSALFSASFSRDGQMVFTACQDGTINLYDLDQLLYAQAQHQHRLSLPMAGGRSAPRMYSGXXXXXXXXXXXXXXXXXXXIRPKKRIRCQDIGWSIVGSAFSPDAKWIAYSSWSRYLHLTNTFGQHELHERVSVSPHRSANFCLFSLAFSADGAQVIGGGNDGCLHLIQLERKAVSRIEQAHYDDVNTVCFVDPVHSPSLVLSGADDGLIKLWDLRTEG-----AVGLLAGHTSGITNVCSKD 383 V F S +F ++S+DG + +ACQD I ++D K +R +D+GWS+V +AFSPD ++ YSSWS +HL N G+HE+HE + + P +FC FS+ FSAD +++ G NDG L++ E AH DDVN+V F D S ++ SG DDGL+K+WD RT VG LAGH+ GIT + SK+ Sbjct: 165 VAQFHSKVFCGTYSQDGDIFLSACQDQNIRIFDTS---------------------------------------------WGKFTLMKSVRARDVGWSVVDTAFSPDGNYLIYSSWSDCIHLCNIHGEHEVHEALHLFPDAGHSFCAFSIVFSADNKEILAGSNDGGLYVYDRESNQRCLKITAHEDDVNSVAFADT--SSHILFSGGDDGLVKVWDRRTLSEATPVPVGTLAGHSDGITFIDSKN 363
BLAST of NO14G02570 vs. NCBI_GenBank
Match: XP_013410755.1 (DDB1- and CUL4-associated factor 11 isoform X2 [Lingula anatina]) HSP 1 Score: 156.0 bits (393), Expect = 2.400e-34 Identity = 85/246 (34.55%), Postives = 120/246 (48.78%), Query Frame = 0 Query: 142 VGGFQSALFSASFSRDGQMVFTACQDGTINLYDLDQLLYAQAQHQHRLSLPMAGGRSAPRMYSGXXXXXXXXXXXXXXXXXXXIRPKKRIRCQDIGWSIVGSAFSPDAKWIAYSSWSRYLHLTNTFGQHELHERVSVSPHRSANFCLFSLAFSADGAQVIGGGNDGCLHLIQLERKAVSRIEQAHYDDVNTVCFVDPVHSPSLVLSGADDGLIKLWDLRTEG-----AVGLLAGHTSGITNVCSKD 383 V F S +F ++S+DG + +ACQD I ++D K +R +D+GWS+V +AFSPD ++ YSSWS +HL N G+HE+HE + + P +FC FS+ FSAD +++ G NDG L++ E AH DDVN+V F D S ++ SG DDGL+K+WD RT VG LAGH+ GIT + SK+ Sbjct: 97 VAQFHSKVFCGTYSQDGDIFLSACQDQNIRIFDTS---------------------------------------------WGKFTLMKSVRARDVGWSVVDTAFSPDGNYLIYSSWSDCIHLCNIHGEHEVHEALHLFPDAGHSFCAFSIVFSADNKEILAGSNDGGLYVYDRESNQRCLKITAHEDDVNSVAFADT--SSHILFSGGDDGLVKVWDRRTLSEATPVPVGTLAGHSDGITFIDSKN 295
BLAST of NO14G02570 vs. NCBI_GenBank
Match: XP_020444003.1 (DDB1- and CUL4-associated factor 11 [Monopterus albus]) HSP 1 Score: 154.1 bits (388), Expect = 9.300e-34 Identity = 87/242 (35.95%), Postives = 120/242 (49.59%), Query Frame = 0 Query: 145 FQSALFSASFSRDGQMVFTACQDGTINLYDLDQLLYAQAQHQHRLSLPMAGGRSAPRMYSGXXXXXXXXXXXXXXXXXXXIRPKKRIRCQDIGWSIVGSAFSPDAKWIAYSSWSRYLHLTNTFGQHELHERVSVSPHRSANFCLFSLAFSADGAQVIGGGNDGCLHLIQLERKAVSRIEQAHYDDVNTVCFVDPVHSPSLVLSGADDGLIKLWDLRT-----EGAVGLLAGHTSGITNVCSK 382 +Q F +S DG M+ +ACQD I LYD + GR ++ ++ +D+GWS++ F+PDA + YSSWS Y+HL + +G E H + ++P FC+FSLA S DG +++GG NDGCL++ LE+ + AH DDVNTV F D S L+ SG+DD L K+WD RT VG LAGH GIT + SK Sbjct: 180 YQQKAFCGVYSEDGNMLLSACQDQNIRLYDTTR------------------GR---------------------------FNLQRTVKARDVGWSVLDVCFTPDAHHVLYSSWSDYIHLCSIYGDSENHTALDLNPD-ERRFCVFSLAASTDGKEILGGANDGCLYVFDLEQNKRTLKIDAHEDDVNTVAFAD--SSSQLLFSGSDDALCKVWDRRTLREDRPQPVGQLAGHRDGITFIHSK 373
BLAST of NO14G02570 vs. NCBI_GenBank
Match: OWF53520.1 (DDB1- and CUL4-associated factor 11 [Mizuhopecten yessoensis]) HSP 1 Score: 153.7 bits (387), Expect = 1.200e-33 Identity = 86/245 (35.10%), Postives = 121/245 (49.39%), Query Frame = 0 Query: 142 VGGFQSALFSASFSRDGQMVFTACQDGTINLYDLDQLLYAQAQHQHRLSLPMAGGRSAPRMYSGXXXXXXXXXXXXXXXXXXXIRPKKRIRCQDIGWSIVGSAFSPDAKWIAYSSWSRYLHLTNTFGQHELHERVSVSPHRSANFCLFSLAFSADGAQVIGGGNDGCLHLIQLERKAVSRIEQAHYDDVNTVCFVDPVHSPSLVLSGADDGLIKLWDLRT-----EGAVGLLAGHTSGITNVCSK 382 V + +F +FS++G + TACQD I +YD + K IR +D+GWSI+ +AFSPD +I YSSWS +HL N G+++ H + + P +FC+FSL FS+D +++GG NDGCL++ E + AH DDVN V F D S ++ SG DDGL+K+WD RT VG+LAGH+ GIT + SK Sbjct: 150 VAKYHHKVFCGTFSKEGNIFLTACQDQHIRIYDTTR---------------------------------------------GNFNLLKTIRAKDVGWSILDTAFSPDGNYIIYSSWSDCIHLCNIHGEYDTHNALHLFPGEH-SFCIFSLTFSSDNREILGGANDGCLYVYDRESNQRTLRIDAHEDDVNAVAFAD--SSSQILFSGGDDGLLKVWDRRTLREENPIPVGVLAGHSDGITYIDSK 346
BLAST of NO14G02570 vs. NCBI_GenBank
Match: XP_021347040.1 (uncharacterized protein LOC110446292 isoform X1 [Mizuhopecten yessoensis]) HSP 1 Score: 153.7 bits (387), Expect = 1.200e-33 Identity = 86/245 (35.10%), Postives = 121/245 (49.39%), Query Frame = 0 Query: 142 VGGFQSALFSASFSRDGQMVFTACQDGTINLYDLDQLLYAQAQHQHRLSLPMAGGRSAPRMYSGXXXXXXXXXXXXXXXXXXXIRPKKRIRCQDIGWSIVGSAFSPDAKWIAYSSWSRYLHLTNTFGQHELHERVSVSPHRSANFCLFSLAFSADGAQVIGGGNDGCLHLIQLERKAVSRIEQAHYDDVNTVCFVDPVHSPSLVLSGADDGLIKLWDLRT-----EGAVGLLAGHTSGITNVCSK 382 V + +F +FS++G + TACQD I +YD + K IR +D+GWSI+ +AFSPD +I YSSWS +HL N G+++ H + + P +FC+FSL FS+D +++GG NDGCL++ E + AH DDVN V F D S ++ SG DDGL+K+WD RT VG+LAGH+ GIT + SK Sbjct: 159 VAKYHHKVFCGTFSKEGNIFLTACQDQHIRIYDTTR---------------------------------------------GNFNLLKTIRAKDVGWSILDTAFSPDGNYIIYSSWSDCIHLCNIHGEYDTHNALHLFPGEH-SFCIFSLTFSSDNREILGGANDGCLYVYDRESNQRTLRIDAHEDDVNAVAFAD--SSSQILFSGGDDGLLKVWDRRTLREENPIPVGVLAGHSDGITYIDSK 355 The following BLAST results are available for this feature:
BLAST of NO14G02570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G02570 ID=NO14G02570|Name=NO14G02570|organism=Nannochloropsis oceanica|type=gene|length=1194bpback to top protein sequence of NO14G02570.1 >NO14G02570.1-protein ID=NO14G02570.1-protein|Name=NO14G02570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=398bpback to top Synonyms
Publications
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