NO14G02560, NO14G02560 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO14G02560 vs. NCBI_GenBank
Match: XP_005855700.1 (wd repeat protein 23, partial [Nannochloropsis gaditana CCMP526] >EKU20660.1 wd repeat protein 23, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 137.9 bits (346), Expect = 2.600e-29 Identity = 69/119 (57.98%), Postives = 82/119 (68.91%), Query Frame = 0 Query: 33 RGRRQRHPVSDHSIKTWWGHRVTRTLIQATFSSEELTGGRFVVTGSAGGGVFVYD-IMGEGXXXXXXXXXGGCALARLDFHKDCVRTVACAPHHDLMISAGWDGRLGLWCWQGREDEEE 151 R RR++HPV DHSI+TW GHR+ RTLIQ FS E LTGGR+VVTGSA G +F YD + EG G A+ +L FH D VRTVA AP DLM+SAGWDG LGLW +QG+ + E Sbjct: 1 RQRRRKHPVGDHSIQTWRGHRIARTLIQPAFSPEALTGGRYVVTGSADGRLFAYDTLAAEGEEAGQAGREDGRAVEKLAFHDDVVRTVAFAPQVDLMVSAGWDGSLGLWRFQGQRAKGE 119
BLAST of NO14G02560 vs. NCBI_GenBank
Match: XP_013410754.1 (DDB1- and CUL4-associated factor 11 isoform X1 [Lingula anatina]) HSP 1 Score: 88.2 bits (217), Expect = 2.400e-14 Identity = 48/129 (37.21%), Postives = 69/129 (53.49%), Query Frame = 0 Query: 19 DYRFDIAEQPLGGRRGRRQRHPVSDHSIKTWWGHRVTRTLIQATFSSEELTGGRFVVTGSAGGGVFVYDIMGEGXXXXXXXXXGGCALARLDFHKDCVRTVACAPHHDLMISAGWDGRLGLWCWQGRED 148 DYR+ P R ++ +H D S+ T+ GH V +LI+A FS TG R++ TG A GGV VYD++ G ++RLD H+ CVR V+ P+ +IS WDG LG W + G ++ Sbjct: 404 DYRW-----PPVPARVKKVKHVEGDSSLMTYRGHSVLHSLIRARFSPAYTTGQRYIYTGCASGGVVVYDVL------------TGKVVSRLDGHRGCVRDVSWHPYEHTIISTSWDGSLGKWTYNGMKN 515
BLAST of NO14G02560 vs. NCBI_GenBank
Match: XP_013410755.1 (DDB1- and CUL4-associated factor 11 isoform X2 [Lingula anatina]) HSP 1 Score: 88.2 bits (217), Expect = 2.400e-14 Identity = 48/129 (37.21%), Postives = 69/129 (53.49%), Query Frame = 0 Query: 19 DYRFDIAEQPLGGRRGRRQRHPVSDHSIKTWWGHRVTRTLIQATFSSEELTGGRFVVTGSAGGGVFVYDIMGEGXXXXXXXXXGGCALARLDFHKDCVRTVACAPHHDLMISAGWDGRLGLWCWQGRED 148 DYR+ P R ++ +H D S+ T+ GH V +LI+A FS TG R++ TG A GGV VYD++ G ++RLD H+ CVR V+ P+ +IS WDG LG W + G ++ Sbjct: 336 DYRW-----PPVPARVKKVKHVEGDSSLMTYRGHSVLHSLIRARFSPAYTTGQRYIYTGCASGGVVVYDVL------------TGKVVSRLDGHRGCVRDVSWHPYEHTIISTSWDGSLGKWTYNGMKN 447
BLAST of NO14G02560 vs. NCBI_GenBank
Match: KZV14942.1 (hypothetical protein F511_36229 [Dorcoceras hygrometricum]) HSP 1 Score: 83.2 bits (204), Expect = 7.700e-13 Identity = 51/141 (36.17%), Postives = 75/141 (53.19%), Query Frame = 0 Query: 8 AEERYAVDVDVDYRFDIAEQPLGGRRGRRQRHPVSDHSIKTWWGHRVTRTLIQATFSSEELTGGRFVVTGSAGGGVFVYDIMGEGXXXXXXXXXGGCALARLDFHKDCVRTVACAPHHDLMISAGWDGRLGLWCWQGREDE 149 + RYA D DYR+ E P R ++ RHP D S+ T+ GH V RTLI+ FS TG +++ TGS G V++YD++ G +A+LDFH D VR P + +++S+ WDG + W + G+ E Sbjct: 337 SRRRYA---DWDYRW--MEYP---ERAKKLRHP-DDLSLATYRGHSVLRTLIRCYFSPAYSTGQKYIYTGSTDGSVYIYDLV------------NGDQVAKLDFHDDPVRDCNWHPSYPMIVSSSWDGIIANWEFPGKGQE 456
BLAST of NO14G02560 vs. NCBI_GenBank
Match: XP_019253489.1 (PREDICTED: LEC14B homolog [Nicotiana attenuata] >XP_019253490.1 PREDICTED: LEC14B homolog [Nicotiana attenuata] >OIS98745.1 lec14b-like protein [Nicotiana attenuata]) HSP 1 Score: 83.2 bits (204), Expect = 7.700e-13 Identity = 45/128 (35.16%), Postives = 70/128 (54.69%), Query Frame = 0 Query: 17 DVDYRFDIAEQPLGGRRGRRQRHPVSDHSIKTWWGHRVTRTLIQATFSSEELTGGRFVVTGSAGGGVFVYDIMGEGXXXXXXXXXGGCALARLDFHKDCVRTVACAPHHDLMISAGWDGRLGLWCWQG 145 D DYR+ + + RR R D S+ T+ GH+V RTLI+ FS TG +F+ TGSA V++YD++ G +A+LD+H+D VR P++ +++S+GWDG + W + G Sbjct: 347 DWDYRWMDYPEHVRNRRNPR------DLSLTTYKGHKVLRTLIRCYFSPAHSTGQKFIYTGSADSSVYIYDVV------------SGAQVAKLDYHQDPVRDCNWHPYYPMLVSSGWDGIIANWEFPG 456
BLAST of NO14G02560 vs. NCBI_GenBank
Match: XP_023720677.1 (DDB1- and CUL4-associated factor 11 isoform X1 [Cryptotermes secundus] >PNF20119.1 DDB1- and CUL4-associated factor 11 [Cryptotermes secundus]) HSP 1 Score: 83.2 bits (204), Expect = 7.700e-13 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 0 Query: 4 AGRGAEERYAVDVDVDYRFDIAEQPLGGRRGRRQRHPVSDHSIKTWWGHRVTRTLIQATFSSEELTGGRFVVTGSAGGGVFVYDIMGEGXXXXXXXXXGGCALARLDFHKDCVRTVACAPHHDLMISAGWDGRLGLWCWQGR 146 +G+ + D DYR+ Q + + +++ D S+ T+ GHRV +TL++ FS E +TG R++ TG A G V +YD++ G + L H+ CVR V+ PH +IS WDG LG W + G+ Sbjct: 361 SGQNNTRKAVSDQTWDYRW----QKVPKKLSNPKKNLEGDTSVMTYRGHRVLQTLVRCHFSPEFITGQRYIYTGCAAGRVVIYDVL------------TGKVHSVLSGHRACVRDVSWHPHRQELISTSWDGTLGRWTYSGK 486
BLAST of NO14G02560 vs. NCBI_GenBank
Match: XP_023720678.1 (DDB1- and CUL4-associated factor 11 isoform X2 [Cryptotermes secundus] >PNF20118.1 DDB1- and CUL4-associated factor 11 [Cryptotermes secundus]) HSP 1 Score: 83.2 bits (204), Expect = 7.700e-13 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 0 Query: 4 AGRGAEERYAVDVDVDYRFDIAEQPLGGRRGRRQRHPVSDHSIKTWWGHRVTRTLIQATFSSEELTGGRFVVTGSAGGGVFVYDIMGEGXXXXXXXXXGGCALARLDFHKDCVRTVACAPHHDLMISAGWDGRLGLWCWQGR 146 +G+ + D DYR+ Q + + +++ D S+ T+ GHRV +TL++ FS E +TG R++ TG A G V +YD++ G + L H+ CVR V+ PH +IS WDG LG W + G+ Sbjct: 327 SGQNNTRKAVSDQTWDYRW----QKVPKKLSNPKKNLEGDTSVMTYRGHRVLQTLVRCHFSPEFITGQRYIYTGCAAGRVVIYDVL------------TGKVHSVLSGHRACVRDVSWHPHRQELISTSWDGTLGRWTYSGK 452
BLAST of NO14G02560 vs. NCBI_GenBank
Match: XP_023720679.1 (DDB1- and CUL4-associated factor 11 isoform X3 [Cryptotermes secundus]) HSP 1 Score: 83.2 bits (204), Expect = 7.700e-13 Identity = 46/142 (32.39%), Postives = 72/142 (50.70%), Query Frame = 0 Query: 4 AGRGAEERYAVDVDVDYRFDIAEQPLGGRRGRRQRHPVSDHSIKTWWGHRVTRTLIQATFSSEELTGGRFVVTGSAGGGVFVYDIMGEGXXXXXXXXXGGCALARLDFHKDCVRTVACAPHHDLMISAGWDGRLGLWCWQGR 146 +G+ + D DYR+ Q + + +++ D S+ T+ GHRV +TL++ FS E +TG R++ TG A G V +YD++ G + L H+ CVR V+ PH +IS WDG LG W + G+ Sbjct: 298 SGQNNTRKAVSDQTWDYRW----QKVPKKLSNPKKNLEGDTSVMTYRGHRVLQTLVRCHFSPEFITGQRYIYTGCAAGRVVIYDVL------------TGKVHSVLSGHRACVRDVSWHPHRQELISTSWDGTLGRWTYSGK 423
BLAST of NO14G02560 vs. NCBI_GenBank
Match: XP_019629598.1 (PREDICTED: DDB1- and CUL4-associated factor 11-like isoform X2 [Branchiostoma belcheri]) HSP 1 Score: 82.8 bits (203), Expect = 1.000e-12 Identity = 49/141 (34.75%), Postives = 69/141 (48.94%), Query Frame = 0 Query: 5 GRGAEERYAVDVDVDYRFDIAEQPLGGRRGRRQRHPVSDHSIKTWWGHRVTRTLIQATFSSEELTGGRFVVTGSAGGGVFVYDIMGEGXXXXXXXXXGGCALARLDFHKDCVRTVACAPHHDLMISAGWDGRLGLWCWQGR 146 G A R + + DYR+ QP+ R D S+ T+ GH V TL++ FS TG RF+ +G + G V VYD++ G + +L HK CVR V+ P+ ++S GWDG LGLW W+ R Sbjct: 404 GLEASRRAVANQNWDYRW----QPVPKRVRTSSARLAGDTSLMTYRGHGVLHTLVRCRFSPVHTTGQRFIYSGCSTGSVVVYDVL------------TGKIVEKLRGHKACVRDVSWHPYEPKIMSTGWDGVLGLWEWRRR 528
BLAST of NO14G02560 vs. NCBI_GenBank
Match: XP_019629605.1 (PREDICTED: DDB1- and CUL4-associated factor 11-like isoform X8 [Branchiostoma belcheri]) HSP 1 Score: 82.8 bits (203), Expect = 1.000e-12 Identity = 49/141 (34.75%), Postives = 69/141 (48.94%), Query Frame = 0 Query: 5 GRGAEERYAVDVDVDYRFDIAEQPLGGRRGRRQRHPVSDHSIKTWWGHRVTRTLIQATFSSEELTGGRFVVTGSAGGGVFVYDIMGEGXXXXXXXXXGGCALARLDFHKDCVRTVACAPHHDLMISAGWDGRLGLWCWQGR 146 G A R + + DYR+ QP+ R D S+ T+ GH V TL++ FS TG RF+ +G + G V VYD++ G + +L HK CVR V+ P+ ++S GWDG LGLW W+ R Sbjct: 348 GLEASRRAVANQNWDYRW----QPVPKRVRTSSARLAGDTSLMTYRGHGVLHTLVRCRFSPVHTTGQRFIYSGCSTGSVVVYDVL------------TGKIVEKLRGHKACVRDVSWHPYEPKIMSTGWDGVLGLWEWRRR 472 The following BLAST results are available for this feature:
BLAST of NO14G02560 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO14G02560 ID=NO14G02560|Name=NO14G02560|organism=Nannochloropsis oceanica|type=gene|length=456bpback to top protein sequence of NO14G02560.1 >NO14G02560.1-protein ID=NO14G02560.1-protein|Name=NO14G02560.1|organism=Nannochloropsis oceanica|type=polypeptide|length=152bpback to top Synonyms
Publications
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