NO14G02510, NO14G02510 (gene) Nannochloropsis oceanica

Overview
NameNO14G02510
Unique NameNO14G02510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3673
Alignment locationchr14:757880..761552 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:757880..761552 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO14G02510 vs. NCBI_GenBank
Match: EWM24564.1 (hypothetical protein Naga_100140g3 [Nannochloropsis gaditana])

HSP 1 Score: 88.2 bits (217), Expect = 1.300e-13
Identity = 55/112 (49.11%), Postives = 74/112 (66.07%), Query Frame = 0
Query:  183 AVSMEEEEGKEEDLIDLLDRPSQCTRGTTTTTATNPS-IEQLLHGFRGIL---PPTFSSSPPPPLQDLLDALRTTHKDRLQDSAKQIAHELKKAQTSLHVRLPYRHGALLRA 291
            A+  +EEEG+E+ L DLL   +Q  + T    A   S ++ LL GFRG+L       SS+P P  ++L++AL TT  DRL+DSA+QIAHEL+K Q SL +RLPY+ GAL RA
Sbjct:  174 AMEEKEEEGEEKSL-DLLGHQTQFFQPTQKEAARRASPVQDLLRGFRGVLGGRRSAPSSAPLPCFRELIEALSTTQADRLEDSARQIAHELRKVQESLRIRLPYQPGALRRA 284          
The following BLAST results are available for this feature:
BLAST of NO14G02510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24564.11.300e-1349.11hypothetical protein Naga_100140g3 [Nannochloropsi... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002468NSK002468Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02510.1NO14G02510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO14G02510.2NO14G02510.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|630594gene_5833Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100140g3gene5922Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02510.1NO14G02510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO14G02510.2NO14G02510.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02510 ID=NO14G02510|Name=NO14G02510|organism=Nannochloropsis oceanica|type=gene|length=3673bp
AACACACAGCAAACGCCAAGCAAGGAGCATGTTTGGCAACCTGTTCGGCA
AGCAGTCTATAGACAACCTGGACCTGGAGGGCTGGCGCCGCAAGCGGCAG
CGCGAAGgtaaataatacgctaagttctggggagcaggggtctggttgtt
ccgcttgccgatagattagataccctcatttgcacacagctcactacaaa
ccgtgcacacgcacacgcacgcaacacagATATCGAGGAGGTCCTGGACA
GTAGCGATGATGAGGAGTGCGAGCAGCTTGAGGAGCGGGAGCAGTCAAGG
ACAGAGGAAAGCGGGGGTGGGCGCCGCGGCAAGGCGGGGCGGATGCGTCT
GAACGAGgtgagaatagaggagaagggagggacaggcagagggtactagc
tatcgaagtgcaggcacatgtttttttggtaccatgcacttgcattttgt
aggagggtctgggtgtcgaccgaaatgaaaggaagaaggagatggagggc
aagaggaagggcccatcatccctaaaggcgcgcctctccctttgataccc
ctcattgctactccactcttatcctcttctttgcaattcataaactgttg
cccaaagtgtggaacacccaatcgcactttttgtgggtgtagcctttcac
ttatcatcctcttgcctcatactctcccaaaaataaatagGAGACCACCA
TGAGCAGCTGGCGCACGACGACGACGACGACACTGACTGAAGAGCGCGAC
GTCGCCATGCAATACATGCAGCAAGGCGGAGGAGGGGAAGGAGGGGGGAA
GGAGGAAAATGGGGAGGAAAGGGGGGAAGAGGATGGGATAGGGGGAATGC
TGAGAATGATGACGGCGATGCAGGAGGAACCACGGAGAGGAGTGGATGAA
GGTCAGGGCCAGGACGAGGATGAGGAGGCAGGAGAAGAGGGGGGAGAAGA
AGAGGAGGAGATCACGGAAGAGACTTTGTTAAAGACGCTATTAGAAGCCG
TGGCGTCCGCGAAACGTGCGCGGGGAGAAGCAGTGTCGATGGAGGAGGAG
GAAGGGAAGGAGGAAGACCTAATCGATCTGCTTGACCGCCCTAGCCAGTG
CACGCGTGGCACCACCACCACCACTGCCACCAATCCCTCTATCGAACAAC
TCCTCCACGGCTTCCGTGGCATCCTCCCCCCCACATTTTCCTCCTCCCCT
CCTCCTCCATTGCAGGACCTTCTTGACGCCCTTCGCACCACCCACAAGGA
TCGCCTCCAAGACAGCGCCAAGCAAATCGCGCACGAGCTGAAGAAAGCCC
AAACCTCCCTTCATGTTCGCCTTCCCTACCGGCATGGTGCTCTTCTGCGT
GCCTCTCGACAGCGACAACGGGAGCAACAGCGGGAGAAGGAAGAGCAGCA
GCAGCAGCAGCAGGAAGGAGGAGGAGGGGAGGGAGGAGGAGGCGCGAAGA
AAGCAGACGAAGTATTCGAGCAGCAGATGTGGACGTGCAATAGTTTGATT
GACCAGCTGCTCGCGCTGGAGGAGGCGGGGGGTCGGTTGATTGAATACGG
CCGTGAGTACAGTGAGCGAAATACGGGAGCGTTGGAAGAGAAGGATGCAT
GGATCAAGACGTGGCAATTCAAATTGCTTGAGCAGAGTGCAGAGGTGGAG
CGGACGAAGGGGGAATTGAGGGGGATGGATGAGGAGTTTGATACGATTGT
ACAGCGTTCATTTGCTGCTTCCTCGGAGGAGGGGGGGAGTGGGCTATCCT
CCATCCCCTCCCTCCCTACCTCTCCCTCCTTTCCTTCCTCGCTTGCCTTG
GTCTCCACGCTGCTGGATGTTTGTCGTGCCCCGCAATATGCGGACCTCGT
CGCCACCCGACAGCACAAGGCCGAGCAACTGGAAAACAAGGAACGGAAGC
GGCAACGGATCGGAACGAATCTTCGCCTGGTCGAGGCCTTCATTGCCCTT
TTGCGGGTGCTAGTCGAACAAGGCCGGCAGAAAGTCACCTCCCAAACTAA
GAAGGTGGAGCGTGAAATAGAGCAAATTCGAAGCCGGCTGCATGGGGATC
TGAAGGAGGAAGTGGTGGCAGCTGCATTGCGCTTGCAGCATGTGTTGGAA
TTTCACGAGGCGAGGAAGGAGAGGGCAGGGAAGAGTGCGAAGCTGCGAGA
GCATGAATTGAGGCAGCACACGTCCTTGTTCGGGCAAGACACCCCGACGG
AGACATTGAGATTGGAAGCATGCGTGAAGGAGTTAAGGAGAGTCGTGTCC
CATTCCACCTTGTCGATTGAACGGGCTATGCAACGgtacgtctttttcct
agtctctcttcctcccccactcccccgccactctgtccttttctgcctcc
cactgctctgttggatgggtcaattgtgtctcgtggctcacgatccctcc
ctcccttaccgaagCAACCAAGTCTTCTGGGCTCGTGTCGAGGATGCCTT
GCCCGAGACCGTCGCCCGCTCGCTGGGTTCTCTCTTTCAGCATCACATGA
CCAGCCCCAACCAAGGCATCAACAGCAGCAGCAGCAATAGCACCAGCACC
GGCAGTGGGAAGGGCCGTCCCCTCTATTCTGCATACCCTGCTCCTTCGTC
CGCTGCTGCTGCTGCTGCTGGTGGTGGTGGTGGTGGTGGCTTTGCGGCCG
CGAATGGTTGTGGTAGTAATCCTTCCGAAGCGCAGTTTCCTGTGTTATTC
CTGCAAGGAGAAGGAGGAGGGAGGGAGGGAGGGAGGGAGGGAGAAGGCTC
ACCGCTGGTACAGATTGTGGCAGAGGGAGCGGCAGCCTCGCAGCAGCAGG
AGGAGGAGGAGAGGGCCAAGGCAGTTAGGGGAGGAGGGGGCATGGGAATG
GAGGAAGAGAAGGGTGTGAGAGGGACGGAAGACGCGGTCATGGGTGTGAG
GGTGGGAGGAGGAGGGAGGAGAAGTCCGGAAGGGGATGGATGTGTCATCA
TGTGAGGGAGGGGAGGAAAACATATGGAGATGGGGGGGCGGGACGGAAGC
AAGCAATTCAAGGGTCTTTGAGACTGAGTAAGCAAGGGAGAGGGGATGAG
AGGGAAGAAGAAGCCAAAAAAAAGAAAGAAGAAGGAGGAGGAGGAGGTGG
AGGAGGTGGAGGAAGAGTCAAGAAATGGAGACGACGTTATTTTTGTTTGT
ATTCGTACTTCCACCACCAGGAGCCGAGGAAGAGTGGATGAAGAGAAAAG
CAGGAAGGGGGGAAGGATGAGGTGGGAAAGAAGGAGCAGAGAGCAAAAGG
AAGGTCAAGACTCAAGACGAGGGAGGGAGGGAGAGAGGGTTAAATGGGTG
GATTGGGAGAACACCAAAAAGAAGACTTCGTTGGAGTCATTATGAATCAA
GAAAGTGACAAGAGAAAAGGAGAATGCCGTTGCCGCAGTAGCAGCAGCGG
CCGCAGCAGGTCTGCAGTCGATTAAATGGATCGAAATAGCATAAGTAATA
CCAAGAAACCAAAAATTATATTCTTTATTTCAGACGATGGCAGAAGAAAA
GAGACAGGCGTACCAGCAGTAGTAGCGGCAGGGAGATACTTCTCGCATAC
CTATACTCACTCCAAGGAGGAGGGCTCAGCGGATAAAAACAAGAAATGAC
AAATGCAAAGAAGAAAAAGAAAAAGAAAAGGTTGAGAAAAACAATAGTCA
TACTCAAAGAAAAATTGGGAAGC
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protein sequence of NO14G02510.1

>NO14G02510.1-protein ID=NO14G02510.1-protein|Name=NO14G02510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=781bp
MFGNLFGKQSIDNLDLEGWRRKRQREDIEEVLDSSDDEECEQLEEREQSR
TEESGGGRRGKAGRMRLNEETTMSSWRTTTTTTLTEERDVAMQYMQQGGG
GEGGGKEENGEERGEEDGIGGMLRMMTAMQEEPRRGVDEGQGQDEDEEAG
EEGGEEEEEITEETLLKTLLEAVASAKRARGEAVSMEEEEGKEEDLIDLL
DRPSQCTRGTTTTTATNPSIEQLLHGFRGILPPTFSSSPPPPLQDLLDAL
RTTHKDRLQDSAKQIAHELKKAQTSLHVRLPYRHGALLRASRQRQREQQR
EKEEQQQQQQEGGGGEGGGGAKKADEVFEQQMWTCNSLIDQLLALEEAGG
RLIEYGREYSERNTGALEEKDAWIKTWQFKLLEQSAEVERTKGELRGMDE
EFDTIVQRSFAASSEEGGSGLSSIPSLPTSPSFPSSLALVSTLLDVCRAP
QYADLVATRQHKAEQLENKERKRQRIGTNLRLVEAFIALLRVLVEQGRQK
VTSQTKKVEREIEQIRSRLHGDLKEEVVAAALRLQHVLEFHEARKERAGK
SAKLREHELRQHTSLFGQDTPTETLRLEACVKELRRVVSHSTLSIERAMQ
RNQVFWARVEDALPETVARSLGSLFQHHMTSPNQGINSSSSNSTSTGSGK
GRPLYSAYPAPSSAAAAAAGGGGGGGFAAANGCGSNPSEAQFPVLFLQGE
GGGREGGREGEGSPLVQIVAEGAAASQQQEEEERAKAVRGGGGMGMEEEK
GVRGTEDAVMGVRVGGGGRRSPEGDGCVIM*
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protein sequence of NO14G02510.2

>NO14G02510.2-protein ID=NO14G02510.2-protein|Name=NO14G02510.2|organism=Nannochloropsis oceanica|type=polypeptide|length=824bp
MFGNLFGKQSIDNLDLEGWRRKRQREDIEEVLDSSDDEECEQLEEREQSR
TEESGGGRRGKAGRMRLNEETTMSSWRTTTTTTLTEERDVAMQYMQQGGG
GEGGGKEENGEERGEEDGIGGMLRMMTAMQEEPRRGVDEGQGQDEDEEAG
EEGGEEEEEITEETLLKTLLEAVASAKRARGEAVSMEEEEGKEEDLIDLL
DRPSQCTRGTTTTTATNPSIEQLLHGFRGILPPTFSSSPPPPLQDLLDAL
RTTHKDRLQDSAKQIAHELKKAQTSLHVRLPYRHGALLRASRQRQREQQR
EKEEQQQQQQEGGGGEGGGGAKKADEVFEQQMWTCNSLIDQLLALEEAGG
RLIEYGREYSERNTGALEEKDAWIKTWQFKLLEQSAEVERTKGELRGMDE
EFDTIVQRSFAASSEEGGSGLSSIPSLPTSPSFPSSLALVSTLLDVCRAP
QYADLVATRQHKAEQLENKERKRQRIGTNLRLVEAFIALLRVLVEQGRQK
VTSQTKKVEREIEQIRSRLHGDLKEEVVAAALRLQHVLEFHEARKERAGK
SAKLREHELRQHTSLFGQDTPTETLRLEACVKELRRVVSHSTLSIERAMQ
RYVFFLVSLPPPLPRHSVLFCLPLLCWMGQLCLVAHDPSLPYRSNQVFWA
RVEDALPETVARSLGSLFQHHMTSPNQGINSSSSNSTSTGSGKGRPLYSA
YPAPSSAAAAAAGGGGGGGFAAANGCGSNPSEAQFPVLFLQGEGGGREGG
REGEGSPLVQIVAEGAAASQQQEEEERAKAVRGGGGMGMEEEKGVRGTED
AVMGVRVGGGGRRSPEGDGCVIM*
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Synonyms
Publications