NO14G02430, NO14G02430 (gene) Nannochloropsis oceanica

Overview
NameNO14G02430
Unique NameNO14G02430
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1905
Alignment locationchr14:719346..721250 +

Link to JBrowse

Properties
Property NameValue
DescriptionElongation factor tu
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:719346..721250 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003924GTPase activity
GO:0005525GTP binding
GO:0016787hydrolase activity
GO:0008135translation factor activity, RNA binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR009000Transl_B-barrel
IPR004160Transl_elong_EFTu/EF1A_C
IPR004161Transl_elong_EFTu/EF1A_2
IPR000795TF_GTP-bd_dom
Homology
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BLAST of NO14G02430 vs. NCBI_GenBank
Match: EWM24563.1 (elongation factor tu [Nannochloropsis gaditana])

HSP 1 Score: 926.4 bits (2393), Expect = 4.800e-266
Identity = 475/632 (75.16%), Postives = 502/632 (79.43%), Query Frame = 0 
Query:    1 MGDSWEDQQGAGAPKLNVGAKPFVFNPGARSFTPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPLWQAVFKMAGGDRAKTEKMLEDPDSLMQYPEIRALVEGVEGGGE---GSTTAAMDAELSRKAEPRMPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKDRFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWEGLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLGKVESGSVKVGQKVLVMPTKNTYEVQSILINDLPVRSAKPGENVKVKLGGAAVEDVQKGYVLCSVGEPCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHLHTAEEEVTVMDLLSIEDRKSGEVKKKPRFARQGNVITCRMRTKREVCCEAFKEMAQLGRLTLRDEGKTIAIGKILTVLP 630
            MGDSWEDQQG G PKLNV AKPFVFNP ARSFTPG                                         DPLWQAV+KMAGGDR KTEKMLEDPDSLMQYPEIRAL+ G E G E   G T   +D +   K EP    A                                        QDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHF+TD KRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDD+TV+WSK+RFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDN+QKPVAASTCPWWEGLY +GEHNTAEPTLISCLDAL I+GR+ +A LRIPVLDRY DRGTI+LGKVESGSV+VGQKV VMP K  +EVQ I INDLPVRSAKPGENVKVKLGGA VEDVQKG+VLC+ G+PCHAATRF+CQLALVDLLEHRPIFSPGY CV HLHTAEEEVTV++LLSIE RK  EVK++PRFARQGNVIT  +RT R+VCCEAFKE+ QLGRLTLRDEGKTIAIGKIL VLP
Sbjct:    1 MGDSWEDQQGKGVPKLNVAAKPFVFNPNARSFTPG--GAASVKTEEVTAKMAAATIQEPAPSNNAVDKNSNNDDENDPLWQAVYKMAGGDREKTEKMLEDPDSLMQYPEIRALLGGGETGSEEKVGGTAEPVDTKPIEKDEPPRAPA----------PSTGGASGKAAIAPAPTVVEDSGNGGEEDVQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFETDTKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDTTVQWSKERFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNLQKPVAASTCPWWEGLYQSGEHNTAEPTLISCLDALHIDGRDSTALLRIPVLDRYHDRGTIALGKVESGSVRVGQKVTVMPMKTQFEVQGITINDLPVRSAKPGENVKVKLGGAGVEDVQKGFVLCTAGKPCHAATRFECQLALVDLLEHRPIFSPGYNCVVHLHTAEEEVTVVELLSIESRKPEEVKRRPRFARQGNVITANLRTARKVCCEAFKEVPQLGRLTLRDEGKTIAIGKILKVLP 620
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BLAST of NO14G02430 vs. NCBI_GenBank
Match: CBJ48633.1 (Sup35, eukaryotic translation termination factor eRF3 [Ectocarpus siliculosus])

HSP 1 Score: 639.8 bits (1649), Expect = 8.900e-180
Identity = 367/552 (66.49%), Postives = 437/552 (79.17%), Query Frame = 0 
Query:   77 DPLWQAVFKMAGGDRAKTEKMLEDPDSLMQYPEIRALVEGVEGGGEGSTTAAMDAELSRKAEPRMPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKDRFDECVSKLKPFLK-SCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWEGLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLGKVESGSVKVGQKVLVMPTKNTYEVQSILINDLPVRSAKPGENVKVKLGGAAVEDVQKGYVLCSVGEPCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHLHTAEEEVTVMDLLSIEDRKSGEVKKKPRFARQGNVITCRMRTKREVCCEAFKEMAQLGRLTLRDEGKTIAIGKILTV 628
            DPLW+A  ++A GDRAK  KMLEDPD+LM  PE+  ++   EG   G   AA++    +  E      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DEDPREHLNLVFIGHVDAGKST+SG +LYLT  VDKRTIER+E+EAKQ NRESWFLAFIMDTNEEERAKGKTVEVGRAHFDT+ KRYTI+DAPGH  YVPNMI GAVQADVGILVISAR+GEFETGF+RGGQTREHALLAKTLGVRYLVVVINKMDD TVKW+K+RFDECV+K++PFL+  CGYA KK+VKFIP+SGL+G N+++ VA   CPWW  +  AG++NT+E TL+  LD L ++ R    PLR+PVLDRY DRGT+ LGKVE G++  G ++ +MPT    +V SI I D  V+SAKPGENV VK+   +  DV +G+VLCS  +PCHAAT F  Q+ALV+L E RPIF+ GY  + H HT EEE TV+++LS+ DRK+G  KK+ RFA++G ++T + +  R +C E+F+EM  LGR TLR EGKTIAIGKIL V
Sbjct:  121 DPLWKATLQVANGDRAKALKMLEDPDALMANPEVNKII--AEGAASGD--AALEVVEGQYPE---QAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDEDPREHLNLVFIGHVDAGKSTLSGNILYLTDFVDKRTIERYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTECKRYTILDAPGHNAYVPNMIQGAVQADVGILVISARKGEFETGFDRGGQTREHALLAKTLGVRYLVVVINKMDDPTVKWAKERFDECVTKIRPFLRQQCGYAVKKEVKFIPISGLSGANVKEQVANDLCPWWGPMIKAGDNNTSEGTLLELLDKLHMDDRHADRPLRVPVLDRYNDRGTMVLGKVEQGTLTEGTQISLMPTGQVSKVDSIFIKDERVKSAKPGENVTVKV-VCSDSDVMRGFVLCSTVQPCHAATLFVAQIALVELTEQRPIFTAGYDAMCHCHTCEEECTVVEILSVVDRKTG-AKKRQRFAKEGAMVTAKFKVDRSMCMESFEEMPHLGRFTLRTEGKTIAIGKILAV 663
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BLAST of NO14G02430 vs. NCBI_GenBank
Match: XP_009034619.1 (hypothetical protein AURANDRAFT_62149 [Aureococcus anophagefferens] >EGB11065.1 hypothetical protein AURANDRAFT_62149 [Aureococcus anophagefferens])

HSP 1 Score: 606.3 bits (1562), Expect = 1.100e-169
Identity = 292/450 (64.89%), Postives = 359/450 (79.78%), Query Frame = 0 
Query:  186 DEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKDRFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWEGLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLGKVESGSVKVGQKVLVMPTKNTYEVQSILIND-LPVRSAKPGENVKVKLGGAAVEDVQKGYVLCSVGEPCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHLHTAEEEVTVMDLLSIEDRKSGEVKKKPR-------FARQGNVITCRMRTKREVCCEAFKEMAQLGRLTLRDEGKTIAIGKILTV 628
            +EDPREHLN+VFIGHVDAGKST+SG +LYLTG VDKRTIE++E+EAKQ NRESWFLAFIMDTNEEERAKGKTVEVGRA F+T+ KRYTI+DAPGHK+YVP+MI+GA QADVGILVISARRGEFETGFERGGQTREHA+L KTLGVR+L+VVINKMDD TV+W K+R+DECVSKLKPFLK+CG+  +K+VKF+P+SGL G N+   V A+ CPWW+    AG+HNT + TLI CLD L IEGR   +P+RIPVLDR+ +RGT+ +GKVESG +  G K+ +MPTK   +V+ + +N+  PV SAKPGENV  K+ GAA+E++ KG+VLCS    C A  +F CQLALV+LLEHRPIF+ GYTC+ H HT E EVT   LLS   + + +VK KP        FA+QG V+  ++     +C E F++M QLGR TLRDEGK+IAIGKI+++
Sbjct:   43 EEDPREHLNVVFIGHVDAGKSTLSGNMLYLTGFVDKRTIEKYEREAKQRNRESWFLAFIMDTNEEERAKGKTVEVGRAPFETEVKRYTILDAPGHKSYVPHMISGAAQADVGILVISARRGEFETGFERGGQTREHAMLCKTLGVRFLLVVINKMDDPTVQWKKERYDECVSKLKPFLKTCGFIIRKEVKFMPISGLVGSNVLNQVDAAVCPWWQACVDAGDHNTTDATLIGCLDKLTIEGRSAESPVRIPVLDRFYERGTMVMGKVESGRIAKGMKLTIMPTKQEVKVEQVYVNETTPVFSAKPGENVSFKVSGAAIEEICKGFVLCS-APVCRAVNKFTCQLALVELLEHRPIFTSGYTCMLHAHTCETEVTCSKLLS---QVNAKVKPKPGAPPRPICFAKQGAVVIAQLSVPETICLEVFEDMNQLGRFTLRDEGKSIAIGKIISL 488
[Close]
BLAST of NO14G02430 vs. NCBI_GenBank
Match: GAX25315.1 (peptide chain release factor subunit 3 [Fistulifera solaris])

HSP 1 Score: 587.4 bits (1513), Expect = 5.300e-164
Identity = 298/554 (53.79%), Postives = 383/554 (69.13%), Query Frame = 0 
Query:   77 DPLWQAVFKMAGGDRAKTEKMLEDPDSLMQYPEIRALVEGVEGGGEGSTTAAMDAELSRKAEPRMPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKDRFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWEGLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLGKVESGSVKVGQKVLVMPTKNTYEVQSILIN-DLPVRSAKPGENVKVKLGGAAVEDVQKGYVLCSVGEPCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHLHTAEEEVTVMDLLSIEDRKSGEVKKKPRFARQGNVITCRMRTKREVCCEAFKEMAQLGRLTLRDEGKTIAIGKILTVLP 630
            DPLWQAV K++ GDR K  K++ +PD L  YPEI+ ++E  E GG+ +     ++EL +  E +  +                                         ++ DPREHLNLVFIGHVDAGKST+SG +LYLT  VDKRTIER+E+EAK LNR+SWFLAFIMDT+E ERAKGKTVEVG+A F+T+ KRYTIMDAPGHKNYVPNMI GA QAD+GILVISAR+GEFETGF+RGGQTREHALLAKTLGV YL+V +NKMD+ TVKWSK+RF+EC+SK++P+LKSCG+  K  VKFIP+SGL G N++  V+ S C WW+  Y  G++NT +PTL   LD+L I GR+ +AP+RIPVLDRY +RGTI++GKVESG+++ G KV VMPT  TY+V  + +N D  + +A+PGE+V VKL GA +ED++KGYVLCS   PC A  +  CQ+A++D+ ++  I + G+ CV H HT EEE T+  +    + K G+V K  RFA  G      +   +    + +  M  LGR TLR EGKTIAIGKI  + P
Sbjct:   47 DPLWQAVLKISDGDREKALKLINNPDELAAYPEIQKILE--ETGGDAAEDE--ESELVQDVEEKAKI------------------------EDSMEDEAESEAPAKPVKEGDPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIERYEREAKALNRDSWFLAFIMDTDEGERAKGKTVEVGKARFETENKRYTIMDAPGHKNYVPNMIQGASQADIGILVISARKGEFETGFDRGGQTREHALLAKTLGVDYLIVAVNKMDEPTVKWSKERFEECISKIRPYLKSCGFTIKTQVKFIPISGLGGANVKDEVSESECSWWKEFYTTGQNNTDQPTLFKLLDSLIIPGRDATAPVRIPVLDRYSERGTIAMGKVESGTLRPGSKVTVMPTGMTYKVDEVWVNDDESIAAARPGESVLVKLNGARLEDIRKGYVLCS-DPPCRAVDKLICQVAIMDMPDNTKIMTAGFQCVFHAHTCEEECTITRIFETTNPK-GQVMKGARFAGIGMRAIVMIELSQSTPLDTYDNMHFLGRFTLRTEGKTIAIGKITKLPP 570
[Close]
BLAST of NO14G02430 vs. NCBI_GenBank
Match: XP_002179052.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC49750.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 578.6 bits (1490), Expect = 2.400e-161
Identity = 281/444 (63.29%), Postives = 344/444 (77.48%), Query Frame = 0 
Query:  188 DPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKDRFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWEGLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLGKVESGSVKVGQKVLVMPTKNTYEVQSILINDLPVRSAKPGENVKVKLGGAAVEDVQKGYVLCSVGEPCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHLHTAEEEVTVMDLLSIEDRKSGEVKKKPRFARQGNVITCRMRTKREVCCEAFKEMAQLGRLTLRDEGKTIAIGKILTVLPGK 632
            DPREHLNLVFIGHVDAGKST+SG +LYLT  VDKRTIER+EKEAK+ NRESWFLAFIMDTNEEERAKGKTVEVG+A F+TD KRYTI+DAPGHKNYVPNMI GA QADVG+LVISAR+GEFETGF+RGGQTREHA+LAKTLGV YLVV +NKMD+ TV+W K+RFDECV+K++PFLKSCG+  K++VKFIP+SGL+G N++  VA S C WW+  Y + E+NT+ PTL+S LD L I GR+P APLRIPVLDRY DRG IS+GKVESG ++ G KV +MPT+N Y+V  +  N+ PV  A+PGENV VKL GA +EDV+KG+V+C+   PC A  +  CQ+A+ D+ ++ PI + G+ C+ H HT EEE TV  +    + K G V K  R+   G      +   + V  E ++ MA +GR TLR EGKT+AIGKI T LP K
Sbjct:    5 DPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIERYEKEAKERNRESWFLAFIMDTNEEERAKGKTVEVGKAQFETDLKRYTILDAPGHKNYVPNMIQGASQADVGVLVISARKGEFETGFDRGGQTREHAMLAKTLGVSYLVVAVNKMDEPTVQWKKERFDECVTKIRPFLKSCGFVIKREVKFIPISGLSGANVKDEVALSECSWWKEYYTSNENNTSAPTLLSLLDTLEIAGRDPEAPLRIPVLDRYTDRGIISMGKVESGIIRPGMKVTIMPTRNKYKVDEVWANEDPVSGARPGENVLVKLNGAKMEDVRKGFVICT-DPPCRAVDKIICQIAVADMPDNTPIMTAGFQCMFHAHTTEEECTVAKIFETTNAK-GVVVKGARYVGVGMRAIVMLDLAQTVPLETYEHMAFMGRFTLRTEGKTVAIGKI-TKLPPK 445
[Close]
BLAST of NO14G02430 vs. NCBI_GenBank
Match: OEU09467.1 (GTP_EFTU-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 563.1 bits (1450), Expect = 1.100e-156
Identity = 271/447 (60.63%), Postives = 339/447 (75.84%), Query Frame = 0 
Query:  185 QDEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKDRFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWEGLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLGKVESGSVKVGQKVLVMPTKNTYEVQSILINDLPVRSAKPGENVKVKLGGAAVEDVQKGYVLCSVGEPCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHLHTAEEEVTVMDLLSIEDRKSGEVKKKPRFARQGNVITCRMRTKREVCCEAFKEMAQLGRLTLRDEGKTIAIGKILTVLPGK 632
            ++ DPREHLNLVFIGHVDAGKST+SG +LY+   VDKRTIER+EKEAK+ NRESWFLAFIMDTNEEERAKGKTVEVG+AHF+T+AKRYTI+DAPGHKNYVPNMI GA QADVG+LVISAR+GEFETGF+RGGQTREHA+LAKTLGV YLVVV+NKMDD TV WSK+RFDECV KL+PFLK CGY  K +VKFIPVSGL G N++  V +S C WW+  + +GE+NT+ PTL+S  D+L I GR  +APLRIP+LDRY DRGTI++GKVESG ++ G KV +MPT+  Y+V ++  N+ PV +A+PGENV +KL GA  EDV+KG+V+C+    C +  +  C++ +V++ E+  I + G+  + H H  EEE T++ +   E    G+  K  RFA       C +   + V  E + +   LGR TLR EGKTIAIGKI  + P K
Sbjct:   12 KEGDPREHLNLVFIGHVDAGKSTLSGSILYILDYVDKRTIERYEKEAKERNRESWFLAFIMDTNEEERAKGKTVEVGKAHFETEAKRYTILDAPGHKNYVPNMIMGASQADVGVLVISARKGEFETGFDRGGQTREHAMLAKTLGVSYLVVVVNKMDDPTVNWSKERFDECVKKLRPFLKGCGYTIKTEVKFIPVSGLVGSNVKDEVDSSICSWWKNSWESGENNTSAPTLLSLFDSLEISGRNATAPLRIPILDRYTDRGTIAMGKVESGVIRPGMKVTLMPTRAEYKVDAVWANEDPVAAARPGENVLIKLAGAGTEDVRKGFVMCT-SPACRSVAKIICEIYVVEMPENTRIMTAGFQAMFHAHCCEEECTILKI--FETTNKGKTLKGARFAGVNMTAVCMIELAQTVPVETYDDYPFLGRFTLRSEGKTIAIGKIQKLPPKK 455
[Close]
BLAST of NO14G02430 vs. NCBI_GenBank
Match: XP_002290333.1 (translation elongation factor-1-alpha [Thalassiosira pseudonana CCMP1335] >EED92085.1 translation elongation factor-1-alpha [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 561.2 bits (1445), Expect = 4.000e-156
Identity = 271/444 (61.04%), Postives = 336/444 (75.68%), Query Frame = 0 
Query:  188 DPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKDRFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWEGLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLGKVESGSVKVGQKVLVMPTKNTYEVQSILINDLPVRSAKPGENVKVKLGGAAVEDVQKGYVLCSVGEPCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHLHTAEEEVTVMDLLSIEDRKSGEVKKKPRFARQGNVITCRMRTKREVCCEAFKEMAQLGRLTLRDEGKTIAIGKILTVLPGK 632
            DPREHLNLVFIGHVDAGKST+SG +LYLT  VDKRTIE++E EAK+ NRESWFLAFIMDTNEEERAKG TVEVGRA F+T+A RY+I+DAPGHKNYVPNMI GA QADVGILVISAR+GEFE+GF++GGQTREHALLAKTLGV YLVVVINKMD+ TV+W K+RFDECV KLKPFLK CG+  KK+VKF+P+SGL G N++  V    C WW+  Y  G++NT + TL+  LD+L ++GR P AP+RIPVLDRY DRGTI++GKVESG+++ G K+ +MPT+  Y+V  +  ++ P+ SA+PGENV VKL GA +ED+QKG+V+CS   PC +  +  CQ+ ++DL +H  + + G+  + H H AEEE TV  +    DRK G+V K   FA  G  + C +   R V  E F +   LGR TLR EGKT AIG I  + P K
Sbjct:   27 DPREHLNLVFIGHVDAGKSTLSGNILYLTDNVDKRTIEKYESEAKERNRESWFLAFIMDTNEEERAKGITVEVGRATFETEAHRYSILDAPGHKNYVPNMIMGASQADVGILVISARKGEFESGFDKGGQTREHALLAKTLGVSYLVVVINKMDEPTVQWKKERFDECVQKLKPFLKGCGFTIKKEVKFMPISGLNGANVKDEVDPKECSWWKDCYKNGDNNTDKATLMDLLDSLELKGRNPDAPVRIPVLDRYSDRGTIAMGKVESGTIRPGMKITLMPTRQKYKVDGLWTDETPLASARPGENVLVKLNGAGMEDIQKGFVICS-DPPCRSVDKLICQVLVMDLPDHAKVLTAGFQAIFHAHCAEEEATVTKIFETTDRK-GKVTKGAHFANVGMRVICMIELARTVPLETFDDYPFLGRFTLRTEGKTCAIGVIKKLPPKK 468
[Close]
BLAST of NO14G02430 vs. NCBI_GenBank
Match: XP_009539693.1 (hypothetical protein PHYSODRAFT_356229 [Phytophthora sojae] >EGZ04851.1 hypothetical protein PHYSODRAFT_356229 [Phytophthora sojae])

HSP 1 Score: 555.8 bits (1431), Expect = 1.700e-154
Identity = 276/445 (62.02%), Postives = 337/445 (75.73%), Query Frame = 0 
Query:  186 DEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKDRFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWEGLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLGKVESGSVKVGQKVLVMPTKNTYEVQSILINDLPVRSAKPGENVKVKLGGAAVEDVQKGYVLCSVGE--PCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHLHTAEEEVTVMDLLSIEDRKSGE-VKKKPRFARQGNVITCRMRTKREVCCEAFKEMAQLGRLTLRDEGKTIAIGKILTV 628
            DEDPREHLN+V IGHVDAGKST+SG LLYL   VDKRTIER+E+EAKQ NR+SWFLA+IMDT EEERAKGKTVEVGRAHF+T+ +R+TI+DAPGHKNYVPNMI GA QADVGILVISAR+GEFETGFERGGQTREHA+LAKTLG+  L+VVINKMD+ +  W ++R+DECV+KL+PFL+ CG+A K+DV FIPVSGL GDN++  V  S  PW+EG            +LI  +D + I  R P  P R+P+LDRY DRGTI+LGKVESG +K GQKVL+MPT  T  V  + IN+LPVR+AKPGENV ++L    +++VQKG+VLC   E  P  A   F  Q+ALVD LEHRP+ + GY C+ H+HT  +E  V  LL   D K+G+ VKK   F +QG  + CR+  ++ +  E F  M QLGRLTLRDEGKTIAIGK+L +
Sbjct:   82 DEDPREHLNVVLIGHVDAGKSTLSGNLLYLMDMVDKRTIERYEREAKQRNRDSWFLAYIMDTGEEERAKGKTVEVGRAHFETETRRFTILDAPGHKNYVPNMIQGASQADVGILVISARKGEFETGFERGGQTREHAMLAKTLGINKLIVVINKMDECS--WGQERYDECVNKLRPFLRMCGFAVKRDVAFIPVSGLQGDNVKVRVDKSKAPWYEG-----------ESLIDHMDTMHIANRNPDGPTRVPILDRYADRGTIALGKVESGILKTGQKVLLMPTNATAIVNQVYINELPVRTAKPGENVTIRL-SCGLDEVQKGFVLCGTKEETPPRAIHAFAAQIALVDTLEHRPLLTAGYKCILHIHTVAQECVVAKLLRPIDPKTGKPVKKHVTFIKQGQSVVCRIEVEQSITVETFANMPQLGRLTLRDEGKTIAIGKVLAL 512
[Close]
BLAST of NO14G02430 vs. NCBI_GenBank
Match: ETI37852.1 (hypothetical protein F443_16281 [Phytophthora parasitica P1569] >ETM37920.1 hypothetical protein L914_15671 [Phytophthora parasitica])

HSP 1 Score: 555.8 bits (1431), Expect = 1.700e-154
Identity = 275/445 (61.80%), Postives = 337/445 (75.73%), Query Frame = 0 
Query:  186 DEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKDRFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWEGLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLGKVESGSVKVGQKVLVMPTKNTYEVQSILINDLPVRSAKPGENVKVKLGGAAVEDVQKGYVLCSVGE--PCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHLHTAEEEVTVMDLLSIEDRKSGE-VKKKPRFARQGNVITCRMRTKREVCCEAFKEMAQLGRLTLRDEGKTIAIGKILTV 628
            DEDPREHLN+V IGHVDAGKST+SG LLYL   VDKRTIER+E+EAKQ NR+SWFLA+IMDT EEERAKGKTVEVGRAHF+T+ +R+TI+DAPGHKNYVPNMI GA QADVGILVISAR+GEFETGFERGGQTREHA+LAKTLG+  L+VVINKMD+    W ++R+DECV+KL+PFL+ CG+A K+DV FIPVSGL GDN++  V  S  PW+EG            +LI  +D + I  R P  P+R+P+LDRY DRGTI+LGKVESG +K GQKVL+MPT  T  V  + IN+ PVR+AKPGENV ++L    ++DVQKG+VLC + E  P  A   F  Q+ALVD LEHRP+ + GY C+ H+HT  +E  +  LL   D K+G+ VKK   F +QG  + CR+  ++ +  E F  M QLGRLTLRDEGKTIAIGK+L +
Sbjct:  131 DEDPREHLNVVLIGHVDAGKSTLSGNLLYLMDMVDKRTIERYEREAKQRNRDSWFLAYIMDTGEEERAKGKTVEVGRAHFETETRRFTILDAPGHKNYVPNMIQGASQADVGILVISARKGEFETGFERGGQTREHAMLAKTLGINKLIVVINKMDE--CNWGQERYDECVTKLRPFLRMCGFAVKRDVAFIPVSGLHGDNVKVRVDKSKAPWYEG-----------ESLIDHMDTMHIGNRNPDGPMRVPILDRYADRGTIALGKVESGILKTGQKVLLMPTNTTAVVNQVYINEQPVRTAKPGENVTIRL-SCGLDDVQKGFVLCGMKEETPPRAIHAFAAQIALVDTLEHRPLLTAGYKCILHIHTVAQECVIAKLLRPIDPKTGKPVKKHVTFIKQGQSVVCRIEVEQSITIETFANMPQLGRLTLRDEGKTIAIGKVLAL 561
[Close]
BLAST of NO14G02430 vs. NCBI_GenBank
Match: KUF82651.1 (Eukaryotic peptide chain release factor GTP-binding subunit ERF3B [Phytophthora nicotianae])

HSP 1 Score: 555.8 bits (1431), Expect = 1.700e-154
Identity = 275/445 (61.80%), Postives = 337/445 (75.73%), Query Frame = 0 
Query:  186 DEDPREHLNLVFIGHVDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEEERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILVISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKDRFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWEGLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLGKVESGSVKVGQKVLVMPTKNTYEVQSILINDLPVRSAKPGENVKVKLGGAAVEDVQKGYVLCSVGE--PCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHLHTAEEEVTVMDLLSIEDRKSGE-VKKKPRFARQGNVITCRMRTKREVCCEAFKEMAQLGRLTLRDEGKTIAIGKILTV 628
            DEDPREHLN+V IGHVDAGKST+SG LLYL   VDKRTIER+E+EAKQ NR+SWFLA+IMDT EEERAKGKTVEVGRAHF+T+ +R+TI+DAPGHKNYVPNMI GA QADVGILVISAR+GEFETGFERGGQTREHA+LAKTLG+  L+VVINKMD+    W ++R+DECV+KL+PFL+ CG+A K+DV FIPVSGL GDN++  V  S  PW+EG            +LI  +D + I  R P  P+R+P+LDRY DRGTI+LGKVESG +K GQKVL+MPT  T  V  + IN+ PVR+AKPGENV ++L    ++DVQKG+VLC + E  P  A   F  Q+ALVD LEHRP+ + GY C+ H+HT  +E  +  LL   D K+G+ VKK   F +QG  + CR+  ++ +  E F  M QLGRLTLRDEGKTIAIGK+L +
Sbjct:  100 DEDPREHLNVVLIGHVDAGKSTLSGNLLYLMDMVDKRTIERYEREAKQRNRDSWFLAYIMDTGEEERAKGKTVEVGRAHFETETRRFTILDAPGHKNYVPNMIQGASQADVGILVISARKGEFETGFERGGQTREHAMLAKTLGINKLIVVINKMDE--CNWGQERYDECVTKLRPFLRMCGFAVKRDVAFIPVSGLHGDNVKVRVDKSKAPWYEG-----------ESLIDHMDTMHIGNRNPDGPMRVPILDRYADRGTIALGKVESGILKTGQKVLLMPTNTTAVVNQVYINEQPVRTAKPGENVTIRL-SCGLDDVQKGFVLCGMKEETPPRAIHAFAAQIALVDTLEHRPLLTAGYKCILHIHTVAQECVIAKLLRPIDPKTGKPVKKHVTFIKQGQSVVCRIEVEQSITIETFANMPQLGRLTLRDEGKTIAIGKVLAL 530
The following BLAST results are available for this feature:
BLAST of NO14G02430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM24563.14.800e-26675.16elongation factor tu [Nannochloropsis gaditana][more]
CBJ48633.18.900e-18066.49Sup35, eukaryotic translation termination factor e... [more]
XP_009034619.11.100e-16964.89hypothetical protein AURANDRAFT_62149 [Aureococcus... [more]
GAX25315.15.300e-16453.79peptide chain release factor subunit 3 [Fistulifer... [more]
XP_002179052.12.400e-16163.29predicted protein [Phaeodactylum tricornutum CCAP ... [more]
OEU09467.11.100e-15660.63GTP_EFTU-domain-containing protein [Fragilariopsis... [more]
XP_002290333.14.000e-15661.04translation elongation factor-1-alpha [Thalassiosi... [more]
XP_009539693.11.700e-15462.02hypothetical protein PHYSODRAFT_356229 [Phytophtho... [more]
ETI37852.11.700e-15461.80hypothetical protein F443_16281 [Phytophthora para... [more]
KUF82651.11.700e-15461.80Eukaryotic peptide chain release factor GTP-bindin... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002458NSK002458Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02430.1NO14G02430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02430.1NO14G02430.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02430 ID=NO14G02430|Name=NO14G02430|organism=Nannochloropsis oceanica|type=gene|length=1905bp
ATGGGTGACAGCTGGGAGGACCAACAAGGAGCTGGCGCGCCCAAGCTCAA
TGTCGGGGCCAAGCCTTTTGTGTTCAACCCTGGAGCTCGTTCCTTTACGC
CTGGTGGCGGTGGGAGAGGAGCAACGACGGAGGATATGACGGCTCAGATG
GCCGCGGCTTCGATTGCGGACCCCGCTGCTAGTAGCAGCAGTGTCATGGA
GGAAGACGACGAGGGGGACGACGAGAACGACCCGTTGTGGCAGGCAGTTT
TCAAGATGGCGGGTGGGGATAGGGCGAAGACAGAAAAGATGTTAGAGGAC
CCCGATTCATTGATGCAATACCCGGAGATCCGGGCGTTGGTCGAAGGAGT
CGAAGGAGGAGGAGAAGGTAGCACGACTGCTGCGATGGACGCGGAGCTCA
GCAGGAAGGCAGAGCCCCGCATGCCCGTTGCCACGGCGGCTGCGCCAGCG
AGCAGCAGCAGCAGCATCAGCAGCAGCAAGATGTCGTCGGGGTCCAGCCC
TTTGGTTGCAGCGGCGGAGGATGATGACGATGCAGGCGGATCGTCAGAGC
TGCAGGATGAAGACCCTCGGGAGCACTTGAATTTGGTATTTATCGGTCAT
GTCGACGCGGGGAAGTCGACGATGTCAGGGCAGCTTCTCTACCTAACGGG
CCAAGTGGATAAGCGCACCATCGAGCGGTTCGAAAAGGAGGCAAAGCAAC
TCAACCGTGAAAGTTGGTTTTTAGCATTCATCATGGATACAAACGAGGAG
GAACGCGCGAAGGGGAAGACCGTGGAAGTGGGTCGGGCACACTTCGATAC
GGATGCGAAGCGCTACACTATTATGGATGCGCCTGGTCACAAGAATTATG
TGCCGAATATGATTGCGGGGGCCGTGCAAGCTGATGTAGGGATTTTGGTT
ATTTCTGCAAGGAGGGGGGAGTTTGAGACGGGCTTCGAGCGGGGGGGTCA
GACGCGGGAGCATGCTTTGCTGGCCAAGACGTTGGGAGTGCGGTACCTGG
TGGTGGTAATCAACAAGATGGACGATTCCACGGTAAAGTGGTCGAAAGAC
CGGTTCGATGAATGCGTGAGTAAGCTCAAACCCTTCCTCAAATCATGTGG
GTATGCTCCGAAAAAGGACGTGAAATTCATCCCTGTGTCGGGTCTGACCG
GAGATAACATTCAGAAGCCCGTGGCGGCATCTACGTGTCCATGGTGGGAG
GGGCTGTACGTGGCAGGGGAGCACAACACGGCCGAGCCGACGTTGATTTC
ATGTTTAGATGCCTTGTGTATTGAGGGCAGAGAGCCCAGCGCGCCGTTGC
GGATCCCAGTCTTAGACCGGTACCAGGATAGGGGAACGATCTCCCTGGGA
AAGGTGGAGAGTGGGAGTGTGAAGGTAGGACAGAAAGTGTTGGTGATGCC
CACGAAGAACACGTATGAGGTGCAATCGATTTTGATCAACGACCTGCCCG
TGCGTTCAGCGAAACCAGGGGAGAATGTCAAGGTCAAGTTGGGGGGGGCG
GCGGTGGAGGATGTTCAGAAAGGGTACGTGCTGTGCTCGGTCGGGGAGCC
ATGTCATGCAGCGACGAGGTTTGATTGTCAGTTAGCCTTGGTGGACTTGT
TGGAGCATCGGCCTATTTTCAGCCCGGGGTATACGTGTGTGGCGCATTTG
CATACGGCTGAGGAGGAGGTGACGGTCATGGACTTGTTGTCAATTGAAGA
TCGGAAGTCAGGAGAGGTGAAGAAGAAGCCCCGGTTTGCGAGGCAGGGGA
ATGTGATTACGTGTCGGATGCGGACGAAACGGGAGGTGTGTTGTGAGGCG
TTTAAGGAGATGGCACAGTTGGGGCGGTTGACGTTGAGGGACGAGGGAAA
GACGATTGCGATTGGCAAGATTTTAACAGTTTTGCCAGGCAAAGTCGCCA
AGTGA
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protein sequence of NO14G02430.1

>NO14G02430.1-protein ID=NO14G02430.1-protein|Name=NO14G02430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=635bp
MGDSWEDQQGAGAPKLNVGAKPFVFNPGARSFTPGGGGRGATTEDMTAQM
AAASIADPAASSSSVMEEDDEGDDENDPLWQAVFKMAGGDRAKTEKMLED
PDSLMQYPEIRALVEGVEGGGEGSTTAAMDAELSRKAEPRMPVATAAAPA
SSSSSISSSKMSSGSSPLVAAAEDDDDAGGSSELQDEDPREHLNLVFIGH
VDAGKSTMSGQLLYLTGQVDKRTIERFEKEAKQLNRESWFLAFIMDTNEE
ERAKGKTVEVGRAHFDTDAKRYTIMDAPGHKNYVPNMIAGAVQADVGILV
ISARRGEFETGFERGGQTREHALLAKTLGVRYLVVVINKMDDSTVKWSKD
RFDECVSKLKPFLKSCGYAPKKDVKFIPVSGLTGDNIQKPVAASTCPWWE
GLYVAGEHNTAEPTLISCLDALCIEGREPSAPLRIPVLDRYQDRGTISLG
KVESGSVKVGQKVLVMPTKNTYEVQSILINDLPVRSAKPGENVKVKLGGA
AVEDVQKGYVLCSVGEPCHAATRFDCQLALVDLLEHRPIFSPGYTCVAHL
HTAEEEVTVMDLLSIEDRKSGEVKKKPRFARQGNVITCRMRTKREVCCEA
FKEMAQLGRLTLRDEGKTIAIGKILTVLPGKVAK*
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Synonyms
Publications