NO14G02410, NO14G02410 (gene) Nannochloropsis oceanica

Overview
NameNO14G02410
Unique NameNO14G02410
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3241
Alignment locationchr14:715350..718590 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:715350..718590 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO14G02410 vs. NCBI_GenBank
Match: EWM24557.1 (hypothetical protein Naga_100140g13 [Nannochloropsis gaditana])

HSP 1 Score: 83.6 bits (205), Expect = 3.500e-12
Identity = 47/88 (53.41%), Postives = 53/88 (60.23%), Query Frame = 0
Query:  334 LWENPTXXXXXXXSAGGLGGSTLKGLSKGGLDEAFVPDEGLAAQFEAERAKYLKGQGITAPARDPV-MEEKKVELEEKEDASPEWDDE 421
            LWENPT       SAGGLGG   K     GLD+AFVPDEGLAA FEAERAKYL+ QGI A  R P     ++   E +E+  P W  E
Sbjct:  175 LWENPTDDYWEMPSAGGLGGGGGKETGMSGLDKAFVPDEGLAAAFEAERAKYLRSQGIQASVRKPPGRSGREAPAEAEEEEEPAWAQE 262          
The following BLAST results are available for this feature:
BLAST of NO14G02410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24557.13.500e-1253.41hypothetical protein Naga_100140g13 [Nannochlorops... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002457NSK002457Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02410.1NO14G02410.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100140g13gene5914Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02410.1NO14G02410.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02410 ID=NO14G02410|Name=NO14G02410|organism=Nannochloropsis oceanica|type=gene|length=3241bp
ACAGCCTTGCTTGAGCTCGACGGGACCACGGAATGATGCAGTAGGCTACA
GTCCAACCGAACATTATGCGTAGAGAGGCACCGCGTGGCGGCATGCAAGC
AAGGAATGGGGCCCCTGCAAGGCTCCCCTCGCCCCTTCCTCCTTCACGCC
ACCTTCCTTCGACTACTCCGCGGATGCATGCCCCATCACCCGGCCCAGCA
CCCTCGCTATCCGCGGACTTTTCGGCATCCCAGCAACTTATGGCAATGCT
GAATCTGGGGGGCAGCGGCAGTGGCAGTGGGGGACAAGGTCGGGGAGGCT
TCTTCGGCAGCGAAGGCGGTAGAGGAGGGGGAGGAGAGAGCAAGATCCCC
TCACAGGTGCCTGCATCACCCCAACAACTTCGGCCGCAGCAGCAGCAGAC
GGAAGGGGAGCGTATGCGTAAACTACGATACGACATCGTTGAGCTTGAAG
TAATTGCCCGCTCGCAAGCCTACCCTCCCGAACGCCCCCGTGGTTTGCCT
CCCCTAGTCATCATGTCGCGTAACCTCCCCACCATGCCCAACGTTGCTGA
CCATCCCATCCGTCGGGCAAACGAGTCAACATTCCGTTCATTTCAATCTT
CCTCCCAACCTCAGCAGTATATTCACCAAAGGCATCAATCACCACAAGTC
AAGCAGCAGCAGCAACAGCAACAGGCGACGGCAGCATCAGCGTCTACAGT
GAAGAAGGGTCCTGTCGATTTTGCTACGTTGGGGCAAGACATCGGCATTG
AGCGGTTAAGAGGGTACAGGGAGGAGGAGGATGAGAGATCGGCACGGACG
ATGTTTCAACAGCGGGAACAGCTGCAACGAGGGAGAGGTGATGACCGAGA
AACAGGAGATAGAGGGGGAGGGAGAATGGGCAGGAATGGCGACCGTGGTG
ATGATAGAAGGGGAGGAAGGGACAGTAGGGAGAAGAATAAAGATCGAGAC
GGCTGTGGTGTGGATGGGAGGGGTTATGGGGGAGGAGGATATGACCGTAA
TGATCGTCGGGGAGGGAGGCCACAATCTTCTCGCCAGCAACAGCAGCAGC
AGAGTGAGGATGACCTGTGGGAGAACCCGACGGACGATTATTGGGAGATG
CCATCGGCGGGGGGGCTGGGTGGGAGTACATTAAAAGGGTTGAGTAAAGG
AGGATTGGACGAGGCTTTCGTGCCTGACGAAGGGCTTGCAGCACAATTTG
AGGCCGAGAGGGCGAAGTACTTAAAGGGGCAGGGGATCACGGCCCCGGCT
CGTGACCCAGTGATGGAGGAGAAGAAGGTAGAGTTGGAGGAGAAGGAAGA
TGCATCCCCGGAGTGGGATGATGAGCCGCTACCGGCTTCGAAAGGGGGGA
GTGGAGGAGCACTGGTGACGAGTCCACCGGGCTTGTCTAGAAGGCAGCAG
CAGCAGCTGCAGCCGCCGCAGCCGCAGCCACAGCAGCAGCCGCAGCAGCA
GCCGCAGCAGCAGCGGATGGCAGCATCATCAATACAACCAGCCAAGTCGT
TGGAAGACCTACAGATTGACATCGACAGCCTCTTTGGTAAGCCCACCAAC
GGAAGCTGTAGCAGTAGCAGCAGCGGCGGCAACAGCGGCAAAGTCGCTTT
CTCTATCCCCTCCTTCTCCTCCTCCTCATCCACCTCTGCTGGTGGCGTCG
GTGGTGCGTTTCAAAGTGGTTTATTTTCTTTCGCTGCTCCTGGTGCCGGG
CTTTCCACCATAGATCTCTACAGAGATCTGGCTGCTGCCTCGTCTTCGGT
TCCATCCTCGTCCTCCTCTGGAGTAGCGGGCCTCACCACCCCCACCATCG
TCAACAGTAGTAGCCCAGCCAGCACCGCAACAATTTCTGCTGATACAGAA
GCTGCCACTTCTACTGCTACTTGCGGTGCCGCTTTATCGGGCTTTGCCTG
TTCTAACTCCACTTGGGCACAATCTACTTTCAACAAGCCTTCGCCTTGGG
CTCCGCCAATACTTCCTGCCAAATCCCAACCACCATCACCACAAAAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGGAGCAGGAGAAGCAGCAACAGCCGCA
ACAGCAGATTTGCCCGTCTCCTTCCGCCAACAGCATGGTGAGCTCAATGC
TTTTCAAACCTAACAGGGCCACAACCCCACCGCAGCAGCAGCAGAAGCAG
CTGCAGCCGCCGCCGCCTCAGACCCTCCCTACTCCACATCCTACTGCTTC
TGGTCCTATTCCCTCCCCACAGCAGCAGATGCTGCTGCAACAGCAACAAC
GACAATACCAACAGCAACAGCGGCAGCAGCAGCAGCAGCATCACCAGCAG
CATCACTACTATCAACAGCACCAACAACTGCCGAAGCACCACCACTACCA
CCACCAGCAGCAGGAGCAGCAATACCGCCACCAACAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGACCAGCAGATCTCATG
GCAATCCTGGGCTTTGGAGGAGGAGGTGGAGGAGCCTCTCACCCCTCCCA
CCCTCACCAACAGCAGCAGCAGGCTCCACCTTCTTCTAAATTTGCCTTCC
ACCAAGCACCTACGGGTCGTGTGGCAAAAAAAACTTCGACAGGAATGATT
AGAGGGCTTCTCCCTTCTTCTGTCTTGATCAATCAAAACCAGAAGAAGAA
GGCTGCTGCTGCCGGTGTTGCGGTGACGGCGCGGTCGGACGAAATTGGAG
GCGAAGCAAGTGGAACTCCGCCACCGTCGACCTAAGAGAGTGAGGAAGGA
AGCGAAGGGAATGGGCATGCGTTATATATATTTAATTAGTGAAAACACAC
ATGTTAGATGAGGGAGAGAGGGAGAGAGGGAGAGGGGGAGGGAGAGAAGA
ATGGATGAGGGGGGAAGGGAGGATAAGAAGGGCAAGGAGCAAAAGACTTT
TATACTCTAGAACGGGTAGGTAAGGCCTCCATCGCGCTGGTGTCATAAAA
GCACATTTGACACACATTCAAAATTAATAGCAGACGCAAGAAGCCCACCA
CCACCAAGAAAACAAAAGCAACCCCCAGAAAGCAGCAGTCTGCAAAAAAA
AAAAATCAGATCTCTTTGCAGTCATAAGGGAAGGGGGGGAAGGTCTTTCG
GCCTGCCATGACCCAACACAGTGACGGTTCTGGCGCTTGAGGAAGAGGAC
AACAAAAAATAAAGTCAACACATAAGGAAAACCAAGAGCAAGTAGGGAAA
AAAACAGTGGACATAAGTAAACCCGAGAAATATTCACGTCA
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protein sequence of NO14G02410.1

>NO14G02410.1-protein ID=NO14G02410.1-protein|Name=NO14G02410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=890bp
MRREAPRGGMQARNGAPARLPSPLPPSRHLPSTTPRMHAPSPGPAPSLSA
DFSASQQLMAMLNLGGSGSGSGGQGRGGFFGSEGGRGGGGESKIPSQVPA
SPQQLRPQQQQTEGERMRKLRYDIVELEVIARSQAYPPERPRGLPPLVIM
SRNLPTMPNVADHPIRRANESTFRSFQSSSQPQQYIHQRHQSPQVKQQQQ
QQQATAASASTVKKGPVDFATLGQDIGIERLRGYREEEDERSARTMFQQR
EQLQRGRGDDRETGDRGGGRMGRNGDRGDDRRGGRDSREKNKDRDGCGVD
GRGYGGGGYDRNDRRGGRPQSSRQQQQQQSEDDLWENPTDDYWEMPSAGG
LGGSTLKGLSKGGLDEAFVPDEGLAAQFEAERAKYLKGQGITAPARDPVM
EEKKVELEEKEDASPEWDDEPLPASKGGSGGALVTSPPGLSRRQQQQLQP
PQPQPQQQPQQQPQQQRMAASSIQPAKSLEDLQIDIDSLFGKPTNGSCSS
SSSGGNSGKVAFSIPSFSSSSSTSAGGVGGAFQSGLFSFAAPGAGLSTID
LYRDLAAASSSVPSSSSSGVAGLTTPTIVNSSSPASTATISADTEAATST
ATCGAALSGFACSNSTWAQSTFNKPSPWAPPILPAKSQPPSPQKQQQQQQ
QQQEQEKQQQPQQQICPSPSANSMVSSMLFKPNRATTPPQQQQKQLQPPP
PQTLPTPHPTASGPIPSPQQQMLLQQQQRQYQQQQRQQQQQHHQQHHYYQ
QHQQLPKHHHYHHQQQEQQYRHQQQQQQQQQQQQQQQQQRPADLMAILGF
GGGGGGASHPSHPHQQQQQAPPSSKFAFHQAPTGRVAKKTSTGMIRGLLP
SSVLINQNQKKKAAAAGVAVTARSDEIGGEASGTPPPST*
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Synonyms
Publications