NO14G02400, NO14G02400 (gene) Nannochloropsis oceanica

Overview
NameNO14G02400
Unique NameNO14G02400
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2891
Alignment locationchr14:712441..715331 +

Link to JBrowse

Properties
Property NameValue
Descriptionhomolog of nucleolar protein NOP56
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:712441..715331 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR036070Nop_dom_sf
IPR002687Nop_dom
IPR012974NOP5_N
IPR012976NOSIC
Homology
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BLAST of NO14G02400 vs. NCBI_GenBank
Match: CBJ48969.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 632.9 bits (1631), Expect = 8.700e-178
Identity = 309/435 (71.03%), Postives = 373/435 (85.75%), Query Frame = 0 
Query:    1 MSSYVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAFQPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGT-ALGVIEPALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGLGHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLKEQVEERLRFYDTGAAPRKNVDVMTSVRKELEAAG 435
            MS +VL+ESASGYAL E+++ +++ SL +EVQ ++ D QRF RTVKLK FQPFT+AENALEN+N+ISE +++DDLK+FLE+NLPK KK+   +  LG IEP L + IQ+ L FPC+SDE  +E++RGIR+HF++++KELDGG+ EK+QLGLGHSYSRAKVK NP RSDNMIIQSI LLDQLDKDLNTFAMRVREWYCWHFPELR+LVKDNY+FARCAAY++DR    EEKL GL EI +DEEL+ +IL A++ SMGMD S  DM NIV F  RMVKLAEYR+ L+AYL++KM  VAPNL  LIG+TV ARLI+KAGSLTSLAKCPAST+QILGAEKALFRALKTKGNTPKYG+IYHS+FIGRAAAKNKGRISR LANKC+IASRID+F+++P+TKYG++L+EQVEERL+FYDTG APRKN+ VM  V  E+   G
Sbjct:    1 MSFFVLYESASGYALLEVMEAEEVGSLLEEVQQAVLDPQRFCRTVKLKGFQPFTTAENALENVNAISEQIVTDDLKNFLEMNLPKVKKSKSASFQLGCIEPGLASAIQDRLGFPCRSDETVKEIIRGIRVHFHRFVKELDGGVGEKAQLGLGHSYSRAKVKMNPARSDNMIIQSICLLDQLDKDLNTFAMRVREWYCWHFPELRELVKDNYMFARCAAYIKDRAAFDEEKLPGLNEIVMDEELAAAILKASRHSMGMDASPVDMSNIVTFCERMVKLAEYRRDLYAYLVDKMGIVAPNLAALIGDTVGARLISKAGSLTSLAKCPASTVQILGAEKALFRALKTKGNTPKYGIIYHSTFIGRAAAKNKGRISRVLANKCAIASRIDSFSDEPSTKYGDELREQVEERLKFYDTGEAPRKNISVMEKVAAEIAREG 435
[Close]
BLAST of NO14G02400 vs. NCBI_GenBank
Match: XP_009519011.1 (hypothetical protein PHYSODRAFT_482921, partial [Phytophthora sojae] >EGZ23723.1 hypothetical protein PHYSODRAFT_482921, partial [Phytophthora sojae])

HSP 1 Score: 593.6 bits (1529), Expect = 5.900e-166
Identity = 290/431 (67.29%), Postives = 367/431 (85.15%), Query Frame = 0 
Query:    2 SSYVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAFQPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGT-ALGVIEPALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGLGHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLKEQVEERLRFYDTGAAPRKNVDVMTSVRKELE 432
            +++VL ESASGYA+FE+V++++IA L  EVQA++ DV  FGR VKLKAFQPFTSAENALEN+N++SE ++ DDLK+FLE+NLPK K   K   ALGV +  L   I ++L+ PC + E T E++RG+R+HF+ ++KEL  G L K+QLGLGHSYSRAKVKFN  R+DNMIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCA+++++R+TL+E+ L+ L++I LDE+ +Q IL AA++SMGMD S  DM N+  FTTR+VKLAEYR+ LH YL+ KM+TVAPNL +LIGE+V ARLI+ AGSLT+LAKCPAST+QILGAEKALFRALKT+GNTPKYGL++HS+FIGRAAAKNKGRISRYLANKC+IASRID+F ++PTTKYG+K++EQVEERL FY++GAAPRKN DVM  V +EL+
Sbjct:    3 NNFVLFESASGYAIFEVVENEEIAGLLAEVQAAVADVSSFGRIVKLKAFQPFTSAENALENINNVSEGLVGDDLKNFLEMNLPKVKAGKKAKFALGVQDKGLAQSISDDLNVPCNTSETTLEIVRGVRMHFSTFVKELANGNLAKAQLGLGHSYSRAKVKFNVNRADNMIIQAIALLDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRSTLSEDSLEELSKIVLDEDKAQQILHAARSSMGMDMSEIDMINVDNFTTRLVKLAEYRRQLHEYLVSKMSTVAPNLASLIGESVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSTFIGRAAAKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDKMREQVEERLAFYESGAAPRKNADVMLEVSEELK 433
[Close]
BLAST of NO14G02400 vs. NCBI_GenBank
Match: POM57956.1 (Nucleolar protein Nop56 [Phytophthora palmivora var. palmivora])

HSP 1 Score: 592.8 bits (1527), Expect = 1.000e-165
Identity = 291/433 (67.21%), Postives = 365/433 (84.30%), Query Frame = 0 
Query:    2 SSYVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAFQPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGT-ALGVIEPALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGLGHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLKEQVEERLRFYDTGAAPRKNVDVMTSVRKELEAA 434
            +++VL ESASGYA+FE+V++++I  L  EVQA++ DV  FGR VKLKAFQPFTSAENALEN+N++SE ++ DDLK+FLE+NLPK K   K   ALGV +  L   I +EL+ PC + E T E++RG+R+HF+ ++KEL  G L K+QLGLGHSYSRAKVKFN  R+DNMIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCA+++++R+TL+E+ L+ L +I LDE+ +Q IL AA++SMGMD S  DM N+  FTTR+VKLAEYR+ LH YL+ KM+TVAPNL +LIGE V ARLI+ AGSLT+LAKCPAST+QILGAEKALFRALKT+GNTPKYGL++HS+FIGRAAAKNKGRISRYLANKC+IASRID+F ++PTTKYG+K++EQVEERL FY++GAAPRKN DVM  V +EL+ A
Sbjct:    4 NNFVLFESASGYAIFEVVENEEIGGLLAEVQAAVADVSSFGRIVKLKAFQPFTSAENALENINNVSEGLVGDDLKNFLEMNLPKVKAGKKAKFALGVQDKGLAQAISDELNAPCNTSETTLEIVRGVRMHFDTFVKELAHGNLAKAQLGLGHSYSRAKVKFNVNRADNMIIQAIALLDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRSTLSEDSLEELAKIVLDEDKAQQILHAARSSMGMDMSEIDMINVDNFTTRLVKLAEYRRQLHEYLVSKMSTVAPNLASLIGEAVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSTFIGRAAAKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDKMREQVEERLAFYESGAAPRKNADVMQEVSEELKKA 436
[Close]
BLAST of NO14G02400 vs. NCBI_GenBank
Match: XP_002999165.1 (nucleolar protein Nop56 [Phytophthora infestans T30-4] >EEY69311.1 nucleolar protein Nop56 [Phytophthora infestans T30-4])

HSP 1 Score: 591.3 bits (1523), Expect = 2.900e-165
Identity = 291/433 (67.21%), Postives = 366/433 (84.53%), Query Frame = 0 
Query:    2 SSYVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAFQPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGT-ALGVIEPALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGLGHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLKEQVEERLRFYDTGAAPRKNVDVMTSVRKELEAA 434
            +++VL ESASGYA+FE+V++++I  L  EVQA++ DV  FGR VKLKAFQPFTSAENALEN+N+ISE +LS+DLK+FLE+NLPK K   K   ALGV +  L   I +EL+ PC + E T E++RG+R+HF  ++KEL  G L K+QLGLGHSYSRAKVKFN  R+DNMIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCA+++++R++L E+ L+ L++I LDE+ +Q IL A+++SMGMD S  DM N+  FTTR+VKLAEYR+ LH YL+ KM+TVAPNL +LIGE+V ARLI+ AGSLT+LAKCPAST+QILGAEKALFRALKT+GNTPKYGL++HS+FIGRAAAKNKGRISRYLANKC+IASRID+F ++PTTKYG+K++EQVEERL FY++GAAPRKN DVM  V +EL+ A
Sbjct:    4 NNFVLFESASGYAIFEVVENEEIGGLLSEVQAAVADVSSFGRIVKLKAFQPFTSAENALENINNISEGLLSEDLKNFLEMNLPKVKAGKKAKFALGVQDKGLAQAISDELNAPCNTSETTLEIVRGVRVHFATFVKELAQGNLAKAQLGLGHSYSRAKVKFNVNRADNMIIQAIALLDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRSSLNEDSLEELSKIVLDEDKAQQILHASRSSMGMDMSEIDMINVDNFTTRLVKLAEYRRQLHEYLVSKMSTVAPNLASLIGESVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSTFIGRAAAKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDKMREQVEERLAFYESGAAPRKNADVMLEVSEELKKA 436
[Close]
BLAST of NO14G02400 vs. NCBI_GenBank
Match: XP_024586623.1 (nucleolar protein nop56 [Plasmopara halstedii] >CEG50254.1 nucleolar protein nop56 [Plasmopara halstedii])

HSP 1 Score: 589.3 bits (1518), Expect = 1.100e-164
Identity = 289/437 (66.13%), Postives = 367/437 (83.98%), Query Frame = 0 
Query:    2 SSYVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAFQPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGT-ALGVIEPALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGLGHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLKEQVEERLRFYDTGAAPRKNVDVMTSVRKELEAAGVLV 438
            +++VL ESASGYA+FE++++++I SL  EVQAS+ D+  FGR VKLKAFQPFTSAENALEN+N+ISE +LSDDLK+FLE+NLPK K + KG   LGV + +L   I +ELS  C + E T E++RG+R+HF+ ++KEL  G L K+QLGLGHSYSRAKVKFN  R+DNMIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCA+++++R +L+E+ L+ L +I LDE+ +Q IL A+++SMGMD S  DM NI  FT+R+V LAEYR+ LH YL+ KM+TVAPNL +LIGE+V ARLI+ AGSLT+LAKCPAST+QILGAEKALFRALKT+GNTPKYGL++HS+FIGRAAAKNKGRISRYLANKC+IASRID+F ++PTTKYG+K++EQVEERL FY++GA PRKN DVM  V  EL+   +++
Sbjct:    4 NNFVLFESASGYAIFEVIENEEIGSLLTEVQASVADISSFGRIVKLKAFQPFTSAENALENINNISEGLLSDDLKNFLEMNLPKVKASKKGKFTLGVQDKSLAQAISDELSVSCNTSETTLEIVRGVRMHFDTFVKELAQGNLAKAQLGLGHSYSRAKVKFNVNRADNMIIQAIALLDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRNSLSEDSLEELAKIVLDEDKAQQILHASRSSMGMDMSEIDMINIDNFTSRLVNLAEYRRQLHQYLVSKMSTVAPNLASLIGESVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSTFIGRAAAKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDKMREQVEERLSFYESGAPPRKNADVMQEVSDELKKDALMI 440
[Close]
BLAST of NO14G02400 vs. NCBI_GenBank
Match: XP_008892177.1 (hypothetical protein PPTG_02695 [Phytophthora parasitica INRA-310] >ETI49601.1 hypothetical protein F443_06593 [Phytophthora parasitica P1569] >ETK89490.1 hypothetical protein L915_06466 [Phytophthora parasitica] >ETL42893.1 hypothetical protein L916_06411 [Phytophthora parasitica] >ETL96069.1 hypothetical protein L917_06276 [Phytophthora parasitica] >ETM49245.1 hypothetical protein L914_06386 [Phytophthora parasitica] >ETN22961.1 hypothetical protein PPTG_02695 [Phytophthora parasitica INRA-310] >ETO78317.1 hypothetical protein F444_06665 [Phytophthora parasitica P1976] >ETP19376.1 hypothetical protein F441_06602 [Phytophthora parasitica CJ01A1] >ETP47305.1 hypothetical protein F442_06637 [Phytophthora parasitica P10297])

HSP 1 Score: 587.8 bits (1514), Expect = 3.200e-164
Identity = 289/426 (67.84%), Postives = 361/426 (84.74%), Query Frame = 0 
Query:    2 SSYVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAFQPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGT-ALGVIEPALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGLGHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLKEQVEERLRFYDTGAAPRKNVDVMTSV 427
            +++VL ESASGYA+FE+V++++I  L  EVQAS+ DV  FGR VKLKAFQPFTSAENALEN+N++SE +LS+DLK+FLE+NLPK K   K   ALGV +  L   I +EL+ PC + E T E++RG+R+HF  ++KEL  G L K+QLGLGHSYSRAKVKFN  R+DNMIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCA+++++R++L+E+ L+ L +I LDE+ +Q IL AA++SMGMD S  DM N+  FTTR+VKLAEYR+ LH YL+ KM+TVAPNL +LIGE+V ARLI+ AGSLT+LAKCPAST+QILGAEKALFRALKT+GNTPKYGL++HS+FIGRAAAKNKGRISRYLANKC+IASRID+F ++PTTKYG+K++EQVEERL FY++GAAPRKN DVM  V
Sbjct:    4 NNFVLFESASGYAIFEVVENEEIGGLLAEVQASVADVSSFGRIVKLKAFQPFTSAENALENINNVSEGLLSEDLKNFLEMNLPKVKSGKKAKFALGVQDKGLAQAISDELNAPCNTSETTLEIVRGVRMHFATFVKELAQGNLAKAQLGLGHSYSRAKVKFNVNRADNMIIQAIALLDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRSSLSEDSLEELAKIVLDEDKAQQILHAARSSMGMDMSEIDMINVDNFTTRLVKLAEYRRQLHEYLVSKMSTVAPNLASLIGESVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSTFIGRAAAKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDKMREQVEERLAFYESGAAPRKNADVMQEV 429
[Close]
BLAST of NO14G02400 vs. NCBI_GenBank
Match: KUF76720.1 (Nucleolar protein 56 [Phytophthora nicotianae])

HSP 1 Score: 587.8 bits (1514), Expect = 3.200e-164
Identity = 289/426 (67.84%), Postives = 361/426 (84.74%), Query Frame = 0 
Query:    2 SSYVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAFQPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGT-ALGVIEPALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGLGHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLKEQVEERLRFYDTGAAPRKNVDVMTSV 427
            +++VL ESASGYA+FE+V++++I  L  EVQAS+ DV  FGR VKLKAFQPFTSAENALEN+N++SE +LS+DLK+FLE+NLPK K   K   ALGV +  L   I +EL+ PC + E T E++RG+R+HF  ++KEL  G L K+QLGLGHSYSRAKVKFN  R+DNMIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCA+++++R++L+E+ L+ L +I LDE+ +Q IL AA++SMGMD S  DM N+  FTTR+VKLAEYR+ LH YL+ KM+TVAPNL +LIGE+V ARLI+ AGSLT+LAKCPAST+QILGAEKALFRALKT+GNTPKYGL++HS+FIGRAAAKNKGRISRYLANKC+IASRID+F ++PTTKYG+K++EQVEERL FY++GAAPRKN DVM  V
Sbjct:    4 NNFVLFESASGYAIFEVVENEEIGGLLAEVQASVADVSSFGRIVKLKAFQPFTSAENALENINNVSEGLLSEDLKNFLEMNLPKVKSGKKAKFALGVQDKGLAQAISDELNAPCNTSETTLEIVRGVRMHFATFVKELAQGNLAKAQLGLGHSYSRAKVKFNVNRADNMIIQAIALLDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRSSLSEDSLEELAKIVLDEDKAQQILHAARSSMGMDMSEIDMINVDNFTTRLVKLAEYRRQLHEYLVSKMSTVAPNLASLIGESVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSTFIGRAAAKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDKMREQVEERLAFYESGAAPRKNADVMQEV 429
[Close]
BLAST of NO14G02400 vs. NCBI_GenBank
Match: OQR98733.1 (nucleolar protein Nop56 [Thraustotheca clavata])

HSP 1 Score: 583.6 bits (1503), Expect = 6.100e-163
Identity = 285/428 (66.59%), Postives = 358/428 (83.64%), Query Frame = 0 
Query:    4 YVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAFQPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGTALGVIEPALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGLGHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLKEQVEERLRFYDTGAAPRKNVDVMTSVRKELE 432
            +VL ESASGYALFE+V+ + I  L D+VQ  +QD+ +FG  VKLKAF PF SAE+ALEN+NSISE +++DDLK FLE+NLP + K  K  +LG+ +  L   + + L  PC ++E + EVLRG+RLHF+K+IKELD G L K+QLGLGHSYSRAKVKFN  R+DNMIIQ+IAL+DQ+DKD+NTFAMRVREWY WHFPEL  +V DNY++ARCA+++++R TL+EE ++ L  I +DE+ +  I+ A++TSMGMD S  DM N+ AFTTR++KLAEYR+ LHAYL+ KM+ VAPNL  LIGETV ARLI+ AGSLT+LAKCPAST+QILGAEKALFRALKT+GNTPKYGL++HSSFIGRAA+KNKGRISRYLANKC+IASRID+F ++PTTKYG+++KEQVEERL FY++GAAPRKN+DVM SV K L+
Sbjct:    5 FVLFESASGYALFEVVEAEQIGQLLDQVQKGVQDLAKFGAAVKLKAFTPFVSAESALENINSISEGLVTDDLKAFLEMNLPTSSKKAK-YSLGLQDKGLAQSLSDSLKIPCNTNETSLEVLRGVRLHFSKFIKELDNGNLAKAQLGLGHSYSRAKVKFNVNRADNMIIQAIALIDQMDKDINTFAMRVREWYSWHFPELVKIVNDNYIYARCASFIKNRNTLSEESVEELAAIVMDEDKANQIVHASRTSMGMDMSEIDMINVDAFTTRLIKLAEYRRQLHAYLVSKMSVVAPNLAALIGETVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSSFIGRAASKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDQMKEQVEERLAFYESGAAPRKNLDVMQSVAKALK 431
[Close]
BLAST of NO14G02400 vs. NCBI_GenBank
Match: XP_012208311.1 (hypothetical protein SPRG_13895 [Saprolegnia parasitica CBS 223.65] >KDO20999.1 hypothetical protein SPRG_13895 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 582.8 bits (1501), Expect = 1.000e-162
Identity = 286/428 (66.82%), Postives = 356/428 (83.18%), Query Frame = 0 
Query:    4 YVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAFQPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGTALGVIEPALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGLGHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLKEQVEERLRFYDTGAAPRKNVDVMTSVRKELE 432
            +VL ESASGYALFE+V+ + I  L D+VQ  +QD+ +FG  VKLKAF PFTSAE+ALEN+NSISE +++DDLK FLE+NLP + K  K T LG+ +  L   + + L  PC ++E + EVLRG+RLHF K+IKELD G L K+QLGLGHSYSRAKVKFN  R+DNMIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCA+++++R TL+++ ++ L  IT+DE+ +  I+ AA+TSMGMD S  DM N+ AFTTR++KLAEYR+ LH YL+ KM+ VAPNL  LIGETV ARLI+ AGSLT+LAKCPAST+QILGAEKALFRALKT+GNTPKYGL++HSSFIGRAA+KNKGRISRYLANKC+IASRID+F ++PTTKYG+++KEQVEERL FY++GAAPRKN+DVM  V   L+
Sbjct:    5 FVLFESASGYALFEVVEAEQIGQLLDQVQKGVQDLAKFGAAVKLKAFSPFTSAESALENINSISEGLVTDDLKAFLEMNLPTSSKKAKYT-LGLTDKGLAQSLTDALKIPCNTNETSLEVLRGVRLHFAKFIKELDNGNLAKAQLGLGHSYSRAKVKFNVNRADNMIIQAIALLDQMDKDVNTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRNTLSDDSIEALAAITMDEDKATQIVHAARTSMGMDMSEIDMINVDAFTTRLIKLAEYRRQLHGYLVSKMSVVAPNLAALIGETVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSSFIGRAASKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDQMKEQVEERLAFYESGAAPRKNLDVMQGVADALK 431
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BLAST of NO14G02400 vs. NCBI_GenBank
Match: XP_012206662.1 (hypothetical protein SPRG_12284 [Saprolegnia parasitica CBS 223.65] >KDO22655.1 hypothetical protein SPRG_12284 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 582.8 bits (1501), Expect = 1.000e-162
Identity = 286/428 (66.82%), Postives = 356/428 (83.18%), Query Frame = 0 
Query:    4 YVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAFQPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGTALGVIEPALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGLGHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFPELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAAKTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGTLIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKYGLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLKEQVEERLRFYDTGAAPRKNVDVMTSVRKELE 432
            +VL ESASGYALFE+V+ + I  L D+VQ  +QD+ +FG  VKLKAF PFTSAE+ALEN+NSISE +++DDLK FLE+NLP + K  K T LG+ +  L   + + L  PC ++E + EVLRG+RLHF K+IKELD G L K+QLGLGHSYSRAKVKFN  R+DNMIIQ+IALLDQ+DKD+NTFAMRVREWY WHFPEL  +V DNYV+ARCA+++++R TL+++ ++ L  IT+DE+ +  I+ AA+TSMGMD S  DM N+ AFTTR++KLAEYR+ LH YL+ KM+ VAPNL  LIGETV ARLI+ AGSLT+LAKCPAST+QILGAEKALFRALKT+GNTPKYGL++HSSFIGRAA+KNKGRISRYLANKC+IASRID+F ++PTTKYG+++KEQVEERL FY++GAAPRKN+DVM  V   L+
Sbjct:    5 FVLFESASGYALFEVVEAEQIGQLLDQVQKGVQDLAKFGAAVKLKAFSPFTSAESALENINSISEGLVTDDLKAFLEMNLPTSSKKAKYT-LGLTDKGLAQSLTDALKIPCNTNETSLEVLRGVRLHFAKFIKELDNGNLAKAQLGLGHSYSRAKVKFNVNRADNMIIQAIALLDQMDKDVNTFAMRVREWYSWHFPELVKIVNDNYVYARCASFIKNRNTLSDDSIEALAAITMDEDKATQIVHAARTSMGMDMSEIDMINVDAFTTRLIKLAEYRRQLHGYLVSKMSVVAPNLAALIGETVGARLISHAGSLTNLAKCPASTVQILGAEKALFRALKTRGNTPKYGLLFHSSFIGRAASKNKGRISRYLANKCAIASRIDSFIDEPTTKYGDQMKEQVEERLAFYESGAAPRKNLDVMQGVADALK 431
The following BLAST results are available for this feature:
BLAST of NO14G02400 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CBJ48969.18.700e-17871.03conserved unknown protein [Ectocarpus siliculosus][more]
XP_009519011.15.900e-16667.29hypothetical protein PHYSODRAFT_482921, partial [P... [more]
POM57956.11.000e-16567.21Nucleolar protein Nop56 [Phytophthora palmivora va... [more]
XP_002999165.12.900e-16567.21nucleolar protein Nop56 [Phytophthora infestans T3... [more]
XP_024586623.11.100e-16466.13nucleolar protein nop56 [Plasmopara halstedii] >CE... [more]
XP_008892177.13.200e-16467.84hypothetical protein PPTG_02695 [Phytophthora para... [more]
KUF76720.13.200e-16467.84Nucleolar protein 56 [Phytophthora nicotianae][more]
OQR98733.16.100e-16366.59nucleolar protein Nop56 [Thraustotheca clavata][more]
XP_012208311.11.000e-16266.82hypothetical protein SPRG_13895 [Saprolegnia paras... [more]
XP_012206662.11.000e-16266.82hypothetical protein SPRG_12284 [Saprolegnia paras... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002456NSK002456Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02400.1NO14G02400.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|38253gene_5822Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100462g1gene5912Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02400.1NO14G02400.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02400 ID=NO14G02400|Name=NO14G02400|organism=Nannochloropsis oceanica|type=gene|length=2891bp
ACGACAGATTCCAGGGAAGCCTTGTGGGTAGCAAGACCAGTAAGGGAACG
CAAGCGCAGCCGCACTGCCGCCTGCTGCTTGAGCTTCCATCACCGACGGA
GGATATTTTAGGACCTGCAGCCTGAGTTTCAGTGCGCAGGATCCGTCCCC
AAGCCCTTACATCGGCCATGgtatgtcgtcaaacataagaaggggtatta
tgaagtgatctagttcgggatgaatggcggggtaaagagtagagtcacca
ctacaggcgaacatgcctccacccacctccccacacccctctccctctac
tctgtggttatgtgcagcatacacacttgaccactctcctgtctgttcgt
gcctggaaatctttccattcagtatctgtgtctttgccttgcccgtttgt
tccgtccgttttttcctcccctcaatcactcacttgtgcccccccgcttt
ttcccctcccctccctcagTCCTCGTACGTCCTTCACGAATCTGCCTCTG
GGTACGCACTCTTCGAACTGGTCCAACACGACGATATTGCTTCTCTGACC
GATGAGGTTCAAGCGTCTATCCAAGACGTGCAACGCTTCGGTCGTACGGT
CAAGCTTAAGGCATTCCAGCCCTTCACCTCGGCGGAGAACGCGTTGGAAA
ACATGAATAGCATCTCGGAGCATGTCTTGAGTGATGACCTCAAGCACTTT
TTAGAACTGAATTTACCCAAGGCCAAAAAGGCGGGGAAGGGGACGGCACT
TGGTGTGATAGAGCCGGCGCTAGGCACGATAATCCAGGAGGAGTTGTCGT
TTCCTTGCAAGAGTGATGAGGCGACAAGGGAGGTGTTGCGAGGGATAAGG
TTGCATTTCAATAAATATATCAAGGAGCTGGATGGGGGCCTGTTGGAGAA
GTCGCAGTTGGGGTTGGGGCATTCGTATTCCCGTGCTAAGgtatgagcgg
ggtgtgagatcgagggagggagggtgggagggaggatgggaagatgattt
gtgttccatgcgaactcctttgttgtcggcagcgattgcgatttctcttt
tgtatttgctctatcgatgtattcctccctttcctgtatatcgacgaggt
gtctgttgatgaaaccattactcagctcactctgactccaccctactccc
acacctctctccaaaacggaaagagggggcacagggtgctgaagagagac
atgtaatccttcactttgacctgaagacccttcgtgtttatgaattcaga
tttccttcctttttttttcctcttttccctcgctctccttctttttcatt
ctgttgtgcccgtacctcacccttcctttatggctcgcaagcatgacgca
cttcataagaatcattccaaccgatgcctcatttcatcccccccgtccct
cttccatgtctaacctcaactatagGTCAAGTTCAACCCGGGCCGGTCGG
ACAACATGATCATCCAATCAATCGCCCTGCTTGACCAACTTGATAAGGAT
CTTAATACCTTCGCGATGCGTGTCCGGGAATGGTACTGCTGGCATTTTCC
CGAGCTCCGCGACTTGGTTAAGGATAATTATGTCTTCGCTCGGTGTGCTG
CCTACGTCCAGGATCGCACCACCCTGACAGAGGAGAAATTGGACGGGTTG
ACAGAGATCACGCTGGACGAGGAATTGTCGCAGAGTATTCTGACGGCGGC
CAAAACGAGCATGGGCATGGACACCTCGGCCTTCGACATGGGGAATATCG
TGGCGTTCACTACACGGATGGTGAAGCTTGCGGAGTACAGGAAGCACCTA
CACGCTTATTTGTTGGAGAAGATGGCGACGGTTGCTCCCAATCTAGgtac
ggaaacccttccttattccctccctccctccctccctccccctaaacatg
tgtgctcaattttctcactttccctccttttccccgtttccttcctcctt
ccctccagGCACACTCATTGGCGAGACCGTCGCCGCCCGGCTCATTGCAA
AGGCCGGTTCTCTCACCTCTCTCGCCAAATGCCCAGCCTCAACCATTCAA
ATCCTGGGTGCTGAGAAGGCCCTTTTCCGCGCCCTTAAAACCAAGGGAAA
CACGCCCAAGTACGGCCTCATCTACCACTCCTCGTTCATTGGTCGTGCGG
CTGCCAAGAACAAAGGACGGATCTCTCGGTATCTTGCCAATAAATGTTCT
ATTGCTTCGAGGATCGACACCTTCACAGAGGATCCAACCACAAAATATGG
AGAGAAGCTCAAGGAGCAGGTGGAGGAACGGTTAAGATTTTATGACACCG
GTGCGGCGCCAAGAAAGAACGTGGATGTGATGACGTCGGTGAGGAAAGAG
CTAGAAGCGGCGGGGGTGCTTGTGGTGGGGGCAGGAGGGGAGGATGGCGG
GAAGGAGAAGAAAAAGAAGAAGGAGAAGAAGGAAAAGAAGAAGGGGAAGG
AGGTGGCGGAAGAGGAGGAGGACGAGGAGGACGAGATGGAGGTGTCTCCG
AAGAAGGATAAGAAAAAGAGGAAGACTGATGAGGTGGAGGAGAGCGCAGA
GACGAAGAAAAAGAAGAAGAAGAAGGATAAGAAATAAAGAAGAGTGAGAA
GGGATGGGTTGAGGGACGGAGGAAACATGTGTGCAAAGATAAGTACTGGA
TGGATAAGATGAGAGAACGGAAAGTTATACGTGTGGGTAAGCGGGCGAGA
AGGAGTAGTGTGTGAGAGAGGACGAAAAATAGGAGTTGCTTTCGTTTACC
TGTGTCCTCGTTTACGTCTTGTGCTTGTTACAGGGGGCATGACGCTCGGG
ACGAGAAGCAACACCCAGACACAGAGAATCTAAGAGCGGCAGGCAGGAAG
GAAAGAACGAGGACAAGACTGGAACTGGCAGAAGCATGGAT
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protein sequence of NO14G02400.1

>NO14G02400.1-protein ID=NO14G02400.1-protein|Name=NO14G02400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=508bp
MSSYVLHESASGYALFELVQHDDIASLTDEVQASIQDVQRFGRTVKLKAF
QPFTSAENALENMNSISEHVLSDDLKHFLELNLPKAKKAGKGTALGVIEP
ALGTIIQEELSFPCKSDEATREVLRGIRLHFNKYIKELDGGLLEKSQLGL
GHSYSRAKVKFNPGRSDNMIIQSIALLDQLDKDLNTFAMRVREWYCWHFP
ELRDLVKDNYVFARCAAYVQDRTTLTEEKLDGLTEITLDEELSQSILTAA
KTSMGMDTSAFDMGNIVAFTTRMVKLAEYRKHLHAYLLEKMATVAPNLGT
LIGETVAARLIAKAGSLTSLAKCPASTIQILGAEKALFRALKTKGNTPKY
GLIYHSSFIGRAAAKNKGRISRYLANKCSIASRIDTFTEDPTTKYGEKLK
EQVEERLRFYDTGAAPRKNVDVMTSVRKELEAAGVLVVGAGGEDGGKEKK
KKKEKKEKKKGKEVAEEEEDEEDEMEVSPKKDKKKRKTDEVEESAETKKK
KKKKDKK*
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Synonyms
Publications