NO14G02350, NO14G02350 (gene) Nannochloropsis oceanica

Overview
NameNO14G02350
Unique NameNO14G02350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3873
Alignment locationchr14:698729..702601 +

Link to JBrowse

Properties
Property NameValue
Descriptionthreonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:698729..702601 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0043039tRNA aminoacylation
GO:0006435threonyl-tRNA aminoacylation
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0004812aminoacyl-tRNA ligase activity
GO:0004829threonine-tRNA ligase activity
GO:0005524ATP binding
GO:0003824catalytic activity
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR018163Thr/Ala-tRNA-synth_IIc_edit
IPR006195aa-tRNA-synth_II
IPR002314aa-tRNA-synt_IIb_cons-dom
IPR004154Anticodon-bd
IPR012947tRNA_SAD
IPR002320Thr-tRNA-ligase_IIa
Homology
BLAST of NO14G02350 vs. NCBI_GenBank
Match: XP_002186178.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65648.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 896.7 bits (2316), Expect = 4.700e-257
Identity = 424/635 (66.77%), Postives = 510/635 (80.31%), Query Frame = 0
Query:   93 SQRFHGPTPFFEPRRFTPSHLNAASGTAIADAPVKETIKLPTNDKSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDF--------DTGDT----KFTEEDLSKIKKEMERIIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEEWWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWESKDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIRKIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVETEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQPEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGRLWQCSTIQCDFNLPERFGLEYVADDGAKKRPIMVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVTDKAFEHAQAVKKRLALAGYRVEVDAGSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTIRTRLGGQLGLYEVEELVAGLGHAVAETKEL 716
            S  FH    F E ++   S L A      A    +E ++LPTND    LLRIRH+SAHVMAMAVQR+FP  QVTIGPWI++GFYYDF        ++G+T    K +E+DL  +KK M++II K  P+ RE+VSREEAR+RI   GE +KLEILD IKTEPIT+YHIG+EWWDLCAGPHV+STG LP  AI+L+S+AGAYWRGDE   ML RIY TAW+   QL++Y++++EEAKKRDHR+LGKKLDLFSIQEDAGGGLVFWHPKG+ +R++IEDFWKD H + GY ++Y+PH+AN++LWKTSGHFDFY+  MFDQM+VE E +QI+PMNCPFHCL+YKD LRSYR+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QLQ+EI GVLDL E+ILS+FGF +Y+VMLST+PEKSVGS EIW AAT AL GAL+ KGW Y VDEGGGAFYGPKID+KIRDAIGR WQCST+QCDFNLPERFGLEY + DG ++RPIMVHRAIFGSIERFFGIL+EN +GDFPLW++P Q++LLPVTD   E+   +  +    G R+EVD GSERL KQIRNAEQARIPVM ++G KE+ES  + +R+R  G LG +EVE+L++ L    A  +E+
Sbjct:   40 SHSFH----FLEQKQ--SSRLFATIADEAATVEEEELVELPTNDNDEELLRIRHSSAHVMAMAVQRIFPEAQVTIGPWIDSGFYYDFFFPERTDEESGETIPARKLSEQDLKDVKKAMDKIIGKDYPISREDVSREEARRRIEKIGEPFKLEILDSIKTEPITLYHIGDEWWDLCAGPHVDSTGKLPKKAIQLQSVAGAYWRGDENREMLQRIYATAWKDPQQLKQYKKMLEEAKKRDHRMLGKKLDLFSIQEDAGGGLVFWHPKGSKVRRMIEDFWKDAHIQDGYDVVYSPHIANIDLWKTSGHFDFYRADMFDQMDVENEQYQIKPMNCPFHCLMYKDELRSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLTETILSRFGFDKYDVMLSTRPEKSVGSDEIWDAATVALEGALKVKGWDYNVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPERFGLEYASADGTRERPIMVHRAIFGSIERFFGILIENCSGDFPLWLAPTQLKLLPVTDAVHEYCNEIAAKALKMGLRIEVDRGSERLAKQIRNAEQARIPVMAVVGMKEMESNSLAVRSRKLGDLGSFEVEDLLSELKRCAAAAEEM 668          
BLAST of NO14G02350 vs. NCBI_GenBank
Match: GAX22709.1 (threonyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 885.9 bits (2288), Expect = 8.300e-254
Identity = 407/601 (67.72%), Postives = 495/601 (82.36%), Query Frame = 0
Query:  127 KETIKLPTNDKSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDT------------KFTEEDLSKIKKEMERIIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEEWWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWESKDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIRKIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVETEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQPEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGRLWQCSTIQCDFNLPERFGLEYVADDGAKKRPIMVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVTDKAFEHAQAVKKRLALAGYRVEVDAGSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTIRTRLGGQLGLYEVEELVAGLGHAVAETKEL 716
            +E I+LPTN+    LL+IRH+SAHVMAMAVQ++FP  QVTIGPWI+NGFYYDF   DT            K TE+DL  +KKEM++II K  P+RREEVSREEAR+RI   GE +KLEILD IKTEPITIYHIGEEWWDLCAGPHVEST  +P  AI L+S+AGAYWRGDEK  ML RIY TAW+   QL++Y++++EEAKKRDHR+LGKKLDLFS+QE+AGGGLVFWHPKG+ IR++IEDFWK+ HE  GY ++Y+PH+AN+NLWKTSGHFDFY+  MFDQM+VE E +QI+PMNCPFHCL++KD LRSYR+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QL++EI GVLDL E ILS+FGF +Y++MLST+PEK+VGS +IW AAT AL GAL++KGW Y VDEGGGAFYGPKID+KIRDAIGR WQCST+QCDFNLP+RFGLEYV+ +G +++PIMVHRAIFGS+ERFFGIL+EN +GDFPLW++P Q +LLPVTD   ++   V  +    G RVEVD GSERL KQIRNAEQ R+P+M ++G KE+E+  + +R+R  G LG + V++L++ L    A  +E+
Sbjct:   62 EEIIQLPTNEDDEELLKIRHSSAHVMAMAVQQVFPEAQVTIGPWIDNGFYYDFYFPDTVDKETGEKVPSRKLTEQDLKAVKKEMDKIISKDYPIRREEVSREEARRRINEIGEPFKLEILDSIKTEPITIYHIGEEWWDLCAGPHVESTSSIPKKAISLDSVAGAYWRGDEKREMLQRIYATAWKDPQQLKQYKKMLEEAKKRDHRMLGKKLDLFSVQEEAGGGLVFWHPKGSKIRRMIEDFWKNAHEDAGYDIVYSPHIANINLWKTSGHFDFYRSDMFDQMDVENEQYQIKPMNCPFHCLMFKDELRSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVLDLTERILSRFGFDKYDIMLSTKPEKAVGSDDIWEAATKALEGALKKKGWEYGVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPDRFGLEYVSAEGTREQPIMVHRAIFGSMERFFGILIENCSGDFPLWLAPTQFKLLPVTDAVHDYCNEVAAKAKKMGIRVEVDRGSERLAKQIRNAEQQRVPIMAVVGVKEMETNNLAVRSRKLGDLGSFNVDDLLSELSRCSAAAEEM 662          
BLAST of NO14G02350 vs. NCBI_GenBank
Match: GAX19238.1 (threonyl-tRNA synthetase [Fistulifera solaris])

HSP 1 Score: 882.1 bits (2278), Expect = 1.200e-252
Identity = 406/616 (65.91%), Postives = 499/616 (81.01%), Query Frame = 0
Query:  112 HLNAASGTAIADAPVKETIKLPTNDKSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDF--------DTGDT----KFTEEDLSKIKKEMERIIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEEWWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWESKDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIRKIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVETEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQPEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGRLWQCSTIQCDFNLPERFGLEYVADDGAKKRPIMVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVTDKAFEHAQAVKKRLALAGYRVEVDAGSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTIRTRLGGQLGLYEVEELVAGLGHAVAETKEL 716
            H  +        +  +E ++LPTN+    LL+IRH+SAHVMAMAVQ++FP  QVTIGPWI+NGFYYDF        +TG+T    K TE+DL  +KKEM++II K  P+RREEVSREEA++RI    E +KLEILD IKTEPITIYHIGEEWWDLCAGPHVEST  +P  AI L+S+AGAYWRGDEK  ML RIY TAW+   QL++Y++++EEAKKRDHR+LGKKLDLFS+QE+AGGGLVFWHPKG+ IR++IEDFWK+ HE  GY ++Y+PH+AN+NLWKTSGHFDFY+  MFDQM+VE E +QI+PMNCPFHCL++KD LRSYR+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QL++EI GVLDL E ILS+FGF +Y++MLST+PEK+VGS +IW AAT AL GAL++KGW Y VDEGGGAFYGPKID+KIRDAIGR WQCST+QCDFNLP+RFGLEYV+ +G +++PIMVHRAIFGS+ERFFGIL+EN +GDFPLW++P Q +LLPVTD    +   V  +    G RVEVD GSERL KQIRNAEQ R+P+M ++G KE+E+  + +R+R  G LG + V++L++ L    A  +E+
Sbjct:   11 HFMSTLAPPAEQSEAEEIVQLPTNEDDEELLKIRHSSAHVMAMAVQQVFPEAQVTIGPWIDNGFYYDFYFPETVNKETGETVPSRKLTEQDLKAVKKEMDKIISKDYPIRREEVSREEAQRRINEINEPFKLEILDSIKTEPITIYHIGEEWWDLCAGPHVESTSRIPKKAISLDSVAGAYWRGDEKREMLQRIYATAWKDPQQLKQYKKMLEEAKKRDHRMLGKKLDLFSVQEEAGGGLVFWHPKGSKIRRMIEDFWKNAHEDAGYDIVYSPHIANINLWKTSGHFDFYRSDMFDQMDVENEQYQIKPMNCPFHCLMFKDELRSYRDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVLDLTERILSRFGFDKYDIMLSTKPEKAVGSDDIWEAATKALEGALKKKGWEYGVDEGGGAFYGPKIDLKIRDAIGRQWQCSTVQCDFNLPDRFGLEYVSAEGTREQPIMVHRAIFGSMERFFGILIENCSGDFPLWLAPTQFKLLPVTDAVQNYCNEVAAKARKMGIRVEVDRGSERLAKQIRNAEQQRVPIMAVVGVKEMETNNLAVRSRKLGDLGSFNVDDLLSELSRCSAAAEEM 626          
BLAST of NO14G02350 vs. NCBI_GenBank
Match: OEU10603.1 (threonyl-tRNA synthetase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 865.1 bits (2234), Expect = 1.500e-247
Identity = 412/622 (66.24%), Postives = 496/622 (79.74%), Query Frame = 0
Query:  124 APVKETIK--------LPTNDKSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDF--------DTGDT----KFTEEDLSKIKKEMERIIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEEWWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWESKDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIRKIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVETEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQPEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGRLWQCSTIQCDFNLPERFGLEYVADDGAKKRPIMVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVTDKAFEHAQAVKKRLALAGYRVEVDAGSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTIRTRLGGQLGLYEVEELVAGLGHAVAETKELHE--VLEVRE 724
            AP KE  K        LPTN+    LLRIRH+S HVMAMAVQ+LFP  Q TIGPWI+NGFYYDF        +TG+T    K + +DL K+KK+M++II K  P+ REE++REEA +RI    E +KLEIL+G+  EPITIYHIG+EWWDLCAGPHVEST  +P  AI L+S+AGAYWRGDE   ML RIY T W+   QL+ Y++++EEAKKRDHR+LGKKLDLFSIQE AGGGLVFWHPKG+ +RKIIED+WKD H + GY ++YTPH+ANL+LWKTSGHFDFYK+ MFDQMEVE E +QI+PMNCPFHCL+YK+ LRSYR+LPIRW ELGTVYRYERSGTLHGL RVRGFTQDDAHIFCLP+QL++EI  VLDL ESIL+KFGF +Y+VMLST+PEK+VGS +IW AAT AL GAL RKGW Y++DEGGGAFYGPKID+KIRDAIGR WQCSTIQCDFNLPERF LEY   D  K+RPIMVHRAIFGS+ERFFGIL+EN  G+FPLW++P QMRLLPVTD A ++   V K+   AG R+EVD G+ERL KQIRNAEQ R+P+M ++G KE+ESG + +R+R  G LG + V++L+A L     +T E+ +  V+E +E
Sbjct:    5 APEKEDTKTAGDIFDELPTNENDGELLRIRHSSGHVMAMAVQKLFPEAQTTIGPWIDNGFYYDFYFPETIDAETGETIESRKLSTDDLKKVKKQMDKIISKNYPITREEITREEAERRIKEINEPFKLEILEGL-VEPITIYHIGDEWWDLCAGPHVESTNQIPKKAIALQSVAGAYWRGDENREMLQRIYATGWKDPMQLKRYKKMLEEAKKRDHRMLGKKLDLFSIQEGAGGGLVFWHPKGSKVRKIIEDYWKDAHAKDGYDVIYTPHIANLDLWKTSGHFDFYKDDMFDQMEVENEQYQIKPMNCPFHCLMYKNELRSYRDLPIRWGELGTVYRYERSGTLHGLFRVRGFTQDDAHIFCLPTQLEDEIVQVLDLTESILTKFGFDKYDVMLSTRPEKAVGSDDIWEAATKALEGALVRKGWPYKIDEGGGAFYGPKIDLKIRDAIGRQWQCSTIQCDFNLPERFELEYKTADNTKERPIMVHRAIFGSLERFFGILIENCEGNFPLWLAPEQMRLLPVTDAAQDYCYEVAKKAKKAGLRIEVDRGNERLPKQIRNAEQQRVPIMAVVGEKEMESGTLAVRSRKLGDLGSFTVDDLLAELHQCTEDTVEMTKMGVVEKKE 625          
BLAST of NO14G02350 vs. NCBI_GenBank
Match: OSX76429.1 (hypothetical protein BU14_0191s0009 [Porphyra umbilicalis])

HSP 1 Score: 859.4 bits (2219), Expect = 8.300e-246
Identity = 399/590 (67.63%), Postives = 485/590 (82.20%), Query Frame = 0
Query:  130 IKLPTNDKSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLSKIKKEMERIIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEEWWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWESKDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIRKIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVETEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQPEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGRLWQCSTIQCDFNLPERFGLEYVADDGAKKRPIMVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVTDKAFEHAQAVKKRLALAGYRVEVDAGSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTIRTRLGGQLGLYEVEELVAGLGHAVAETKELHEVL 720
            ++LPTN+ S  LLRIRH+++HVMAMAVQ LFP+ +VTIGPWI+NGFYYDFD  +  F++ DL  IKKEM++IIK+++PLRREE+SR EA++RI A GE YKLEILD IK+EPIT+YH+G+EWWDLCAGPHVE TG++ A A+ LES+AGAYWRGDE  A L RIYGTAWES DQL+EY+R+ EEAK+RDHR+LG KL LFSIQEDAGGGLVFWH KGA +R+IIEDFWKD H   GY LL TPH+AN  LWKTSGH DFY++ MFDQM+VE E +Q++PMNCPFHCLI++D LRSYRELP+RWAELGTVYR+ERSGTLHGLMRVRGFTQDDAHIFCLP QL  EI  VLDL E+IL +FGF EYE+MLST+PEKSVGS +IW  ATAAL  AL+ K W Y VD+GGGAFYGPKID+KIRDAIGRLWQCSTIQCDFNLPERF LEYV+ +  ++RPIM+HRAIFGS+ERFFGILVE+ AG FPLW++PVQMRLLPVTD A      V  + +  G RVEVD   ERLGK +RN E  ++P++GI+GAKE+E+  +++R R  G +G+  V+ ++ G+  A  +  +  +V+
Sbjct:   76 VRLPTNESSERLLRIRHSTSHVMAMAVQNLFPNAKVTIGPWIDNGFYYDFDV-EEPFSDADLKAIKKEMDKIIKRKLPLRREELSRSEAQERIQALGESYKLEILDSIKSEPITLYHLGDEWWDLCAGPHVEHTGEINAKAVALESVAGAYWRGDETKATLQRIYGTAWESPDQLKEYKRMKEEAKRRDHRMLGPKLGLFSIQEDAGGGLVFWHAKGARVRRIIEDFWKDAHVAAGYELLVTPHVANAALWKTSGHLDFYQDSMFDQMDVEGEQYQLKPMNCPFHCLIFRDGLRSYRELPLRWAELGTVYRFERSGTLHGLMRVRGFTQDDAHIFCLPDQLAPEIERVLDLTENILGRFGFVEYEIMLSTRPEKSVGSDDIWDKATAALRAALDAKDWAYSVDDGGGAFYGPKIDVKIRDAIGRLWQCSTIQCDFNLPERFELEYVSAESKRERPIMLHRAIFGSVERFFGILVESFAGAFPLWLAPVQMRLLPVTDAAASFCADVAAKASQRGMRVEVDYSGERLGKMVRNGEMEKLPLLGIVGAKEMETSQLSVRARGRGDVGVMSVDTVLDGITAATEQVVDFVDVV 664          
BLAST of NO14G02350 vs. NCBI_GenBank
Match: EJK61406.1 (hypothetical protein THAOC_18112, partial [Thalassiosira oceanica])

HSP 1 Score: 857.4 bits (2214), Expect = 3.200e-245
Identity = 402/597 (67.34%), Postives = 487/597 (81.57%), Query Frame = 0
Query:  131 KLPTNDKSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDF--------DTGDT----KFTEEDLSKIKKEMERIIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEEWWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWESKDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIRKIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVETEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQPEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGRLWQCSTIQCDFNLPERFGLEYVADDGAKKRPIMVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVTDKAFEHAQAVKKRLALAGYRVEVDAGSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTIRTRLGGQLGLYEVEELVAGLGHAVAETKEL 716
            +LPTN+   +LL+IRH+S+HVMAMAVQ+ FP  QVTIGPWI+NGFYYDF        +TG+T    K T++DL K+KK M++II K  P+ R E++R+EAR+RI   GE +KLEILD IKTEPITIY IG+EWWDLCAGPHVESTG LP  AI+L+S+AGAYWRGDEK  ML RIY TAW+   QL+ Y+++MEEAKKRDHR+LGKKLDLFSIQEDAGGGLVFWHPKG+ IR  +EDFWK +H   GY L+Y+PH+ANL+LWKTSGHFDFY +GMFDQM VE E +QI+PMNCPFHCL+YKD +RSYR+LP RWAELGTVYRYERSGTLHGL RVRGFTQDDAH+FCLP QLQ+EI  VL L +SILS+FGF +YE+M+ST+PEKSVGS +IW AA +AL G+L+  GW Y +DEGGGAFYGPKID+KI+DAIGR WQCST+QCDFNLPERF LEYV+ +G K+RPIMVHRAIFGSIERFFGILVE+ AGD PLW++PVQMRLLPVTD   ++   V ++    G RVEVD G+ERL KQIRNAEQ+R+PVM ++G KE+E G + +R+R  G LG + V++L++ L     E  E+
Sbjct:  103 ELPTNENDEDLLKIRHSSSHVMAMAVQQAFPEAQVTIGPWIDNGFYYDFYFPETVDEETGETIPSRKLTDQDLKKVKKAMDKIISKNYPIERIELTRDEARERIEKLGEPFKLEILDSIKTEPITIYTIGDEWWDLCAGPHVESTGKLPKKAIQLQSVAGAYWRGDEKREMLQRIYATAWKDPKQLKAYKKLMEEAKKRDHRMLGKKLDLFSIQEDAGGGLVFWHPKGSVIRTKMEDFWKQQHIDAGYDLVYSPHIANLDLWKTSGHFDFYADGMFDQMAVEDETYQIKPMNCPFHCLMYKDDIRSYRDLPFRWAELGTVYRYERSGTLHGLFRVRGFTQDDAHVFCLPDQLQDEIVDVLKLTKSILSRFGFDKYELMISTRPEKSVGSDDIWEAAESALRGSLDELGWDYGLDEGGGAFYGPKIDLKIKDAIGRTWQCSTVQCDFNLPERFDLEYVSAEGTKERPIMVHRAIFGSIERFFGILVESYAGDLPLWLAPVQMRLLPVTDAVKDYCHDVARQAKKMGLRVEVDRGNERLPKQIRNAEQSRVPVMSVVGMKELEEGTLAVRSRKLGDLGSFTVDDLLSELKRCDDEAVEM 699          
BLAST of NO14G02350 vs. NCBI_GenBank
Match: XP_005719141.1 (threonine--tRNA ligase, chloroplast or mitochondrial [Chondrus crispus] >CDF39230.1 threonine--tRNA ligase, chloroplast or mitochondrial [Chondrus crispus])

HSP 1 Score: 851.3 bits (2198), Expect = 2.300e-243
Identity = 399/590 (67.63%), Postives = 479/590 (81.19%), Query Frame = 0
Query:  133 PTNDKSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLSKIKKEMERIIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEEWWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWESKDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIRKIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVETEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQPEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGRLWQCSTIQCDFNLPERFGLEYVADDGAKKRPIMVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVTDKAFEHAQAVKKRLALAGYRVEVDAGSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTIRTRLGGQLGLYEVEELVAGLGHAVAETKELHEVLEVR 723
            PTNDKSP+LLR+RHT+AHVMAMAVQRLFPS  VTIGPWI+NGFYYDFD     FT+ DL +IKKEM++II+ ++PL REE+SR EAR RI    E YKLEIL  I +EPIT+YHIG+ WWDLCAGPHVE TG L   +I LES+AGAYWRGDE  AML RIYGT WES  QL EY     EAK+RDHRVLG KL LF++QE+AGGGLVFWHPKGA +R+++EDFWK++H   GY LLYTPH+AN+ LWKTSGH DFY E MFDQM+VE E +Q++PMNCPFHCL++K+ LRSYRELP+RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP QL  EI+ VLDL ESIL +FGF EYE+MLST+PEKSVGS +IW  AT AL  AL+ KGW Y +D+GGGAFYGPKID+KI+DAIGRLWQCSTIQCDFNLP+RF LEYVA DG++++PIMVHRAIFGS+ERFFGILVE+ AG+FPLW++PVQ++LLPVTD++  + + V       G RVEVD   ERLGK +RN EQ R+P+MGI+GA EVE+G +++R+R  G LG  + +E +  +  AV ++ +   V + R
Sbjct:   84 PTNDKSPHLLRMRHTAAHVMAMAVQRLFPSAHVTIGPWIDNGFYYDFDVAQ-PFTDRDLKRIKKEMDKIIRMKLPLLREEISRAEARHRIEQIDEPYKLEILSAI-SEPITVYHIGDRWWDLCAGPHVEHTGMLDPKSIALESVAGAYWRGDENKAMLQRIYGTCWESPHQLDEYLHRKAEAKRRDHRVLGSKLGLFTVQEEAGGGLVFWHPKGARVRRVMEDFWKEQHMNDGYELLYTPHVANVKLWKTSGHLDFYSESMFDQMDVEGEEYQLKPMNCPFHCLVFKEGLRSYRELPLRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPDQLAGEIKRVLDLTESILGRFGFREYEIMLSTRPEKSVGSNDIWERATNALEEALKVKGWDYSIDDGGGAFYGPKIDVKIKDAIGRLWQCSTIQCDFNLPQRFELEYVAKDGSRQQPIMVHRAIFGSVERFFGILVESFAGEFPLWLAPVQLKLLPVTDESRAYCEKVATDARKMGLRVEVDTSGERLGKMVRNTEQERVPLMGIVGAAEVENGTISVRSRKTGDLGGIDTKETLEKIEVAVKKSVDFEAVDDKR 671          
BLAST of NO14G02350 vs. NCBI_GenBank
Match: EWM24579.1 (threonyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 851.3 bits (2198), Expect = 2.300e-243
Identity = 409/460 (88.91%), Postives = 433/460 (94.13%), Query Frame = 0
Query:   93 SQRFHGPTPFFEPRRFTPSHLNAASGTAIADAPVKETIKLPTNDKSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLSKIKKEMERIIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEEWWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWESKDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIRKIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVETEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQPEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG 553
            SQRFHGP P F PR  +PSHL AA+ +   +    + +KLP+ND+SPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDL+KIKKEMERIIKKR+PLRREEV+REEARKRI A  E YKLEILDGIKTEPITIYHIG+EWWDLCAGPHVESTGDLP+NAIKLESLAGAYWRGDEK AMLTRIYGTAWESK+QL+EYQR+MEEAKKRDHRVLG++LDLFSIQEDAGGGLVFWHPKGAT+RKI+EDFWKDEHERRGY LLYTPHMANL LWKTSGHFDFYKEGMFDQMEVE EAFQIRPMNCPFHCLI+KDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQ+EIRGVLDLVESILSKFGF +YEVMLST+PEKSVGS EIW AAT ALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG
Sbjct:   90 SQRFHGPPPSFAPR--SPSHLGAAATS--TEVRPTQAVKLPSNDQSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLNKIKKEMERIIKKRLPLRREEVTREEARKRIEAMQEPYKLEILDGIKTEPITIYHIGDEWWDLCAGPHVESTGDLPSNAIKLESLAGAYWRGDEKRAMLTRIYGTAWESKEQLKEYQRLMEEAKKRDHRVLGRRLDLFSIQEDAGGGLVFWHPKGATVRKIVEDFWKDEHERRGYQLLYTPHMANLQLWKTSGHFDFYKEGMFDQMEVENEAFQIRPMNCPFHCLIFKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQDEIRGVLDLVESILSKFGFVDYEVMLSTRPEKSVGSEEIWQAATEALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIG 545          
BLAST of NO14G02350 vs. NCBI_GenBank
Match: XP_024368229.1 (threonine--tRNA ligase, chloroplastic/mitochondrial 2-like [Physcomitrella patens] >PNR59732.1 hypothetical protein PHYPA_002524 [Physcomitrella patens])

HSP 1 Score: 844.7 bits (2181), Expect = 2.100e-241
Identity = 407/598 (68.06%), Postives = 477/598 (79.77%), Query Frame = 0
Query:  113 LNAASGTAIADAPVKETIKLPTNDKSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLSKIKKEMERIIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEEWWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWESKDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIRKIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVETEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQPEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGRLWQCSTIQCDFNLPERFGLEYVADDGAKKRPIMVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVTDKAFEHAQAVKKRLALAGYRVEVDAGSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTIRTRLGGQLGLYEVEELVAGLGHAVA 711
            ++  S   I +    + I LPTN+ S NL++IRHT+AHV+AMAVQ+LFP  QVTIGPWIE GFYYDFD  +  FTE+DL KIKKEM+RII + +PL REEVSREEA +RI A  E YKLEIL+GIK+EPITIY IGE+WWDLCAGPHVE TG L   AI+LES+AGAYWRGDEKN ML R+YGTAWE+++QL+ YQ   EEAK+RDHR LG+ L+LFSIQEDAGGGLVFWHPKGA IR IIED+WK  H   GY LLYTPH+A L+LWKTSGH+DFYKE MFDQM++E E +QIRPMNCPFH  +YKD LRSYRELP+R AELGTVYRYERSGTLHGL RVRGFTQDD HIFCLP Q+++EIRGVLDL E IL +FGFS++E+ LST+PEK+VGS EIW  AT AL  ALE KGW Y +DEGGGAFYGPKID+KI DAIGR WQCSTIQ DFNLPERF + YV  D ++K+PIM+HRAIFGSIERFFGIL EN AGDFPLW++PVQ RLLPVTD   ++ + V   L     R EV  G ERLGK IRNAE  +IPVM ++G KEVE+  +T+RTR GG+LG   V +L   +  A++
Sbjct:  103 IDPKSQVEIPEDAENKIIVLPTNESSENLVKIRHTTAHVLAMAVQKLFPEAQVTIGPWIEKGFYYDFDMKEA-FTEKDLKKIKKEMDRIISRNLPLVREEVSREEAERRIKAINEPYKLEILEGIKSEPITIYRIGEDWWDLCAGPHVERTGQLNKRAIELESVAGAYWRGDEKNQMLQRVYGTAWETEEQLKAYQVQKEEAKRRDHRRLGQDLNLFSIQEDAGGGLVFWHPKGAMIRHIIEDYWKKMHFANGYELLYTPHIAKLDLWKTSGHYDFYKENMFDQMQIEEELYQIRPMNCPFHIQVYKDALRSYRELPMRVAELGTVYRYERSGTLHGLFRVRGFTQDDGHIFCLPDQIRDEIRGVLDLTEMILKQFGFSKFEINLSTRPEKAVGSDEIWEKATTALKSALEDKGWEYGIDEGGGAFYGPKIDVKIEDAIGRKWQCSTIQVDFNLPERFNMVYVDSDTSRKQPIMIHRAIFGSIERFFGILTENYAGDFPLWLAPVQARLLPVTDNEVDYCKKVVAELKAREIRAEVIFG-ERLGKLIRNAETQKIPVMAVVGRKEVETETLTVRTRHGGELGNVTVADLADRIQLAIS 698          
BLAST of NO14G02350 vs. NCBI_GenBank
Match: PTQ32685.1 (hypothetical protein MARPO_0096s0034 [Marchantia polymorpha])

HSP 1 Score: 835.1 bits (2156), Expect = 1.700e-238
Identity = 402/592 (67.91%), Postives = 470/592 (79.39%), Query Frame = 0
Query:  123 DAPVKE----TIKLPTNDKSPNLLRIRHTSAHVMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLSKIKKEMERIIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEEWWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWESKDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIRKIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVETEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQPEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDAIGRLWQCSTIQCDFNLPERFGLEYVADDGAKKRPIMVHRAIFGSIERFFGILVENTAGDFPLWMSPVQMRLLPVTDKAFEHAQAVKKRLALAGYRVEVDAGSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTIRTRLGGQLGLYEVEELVAGLGHAVA 711
            + PV E     + LPTND S  LL+IRHTSAHVMAMAVQ+L+P  QVTIGPWIE GFYYDFD  +    E+DL KIKKEM++I+ + +PLRREEVSREEA +RI A  E YKLEILD IKTEPITIYHIG+EWWDLCAGPH+E TG +P  A++LE++AGAYWRGDEK AML RIYGTAWE+++QL+ YQ   EEAK+RDHR LG+ L LFSIQEDAGGGLVFWHPKGA +R IIE++WK  H +RGY LLYTPH+A L+LWKTSGH+DFY+E M+D M+VE E +Q+RPMNCP H  IYKD LRSYRELP+R AELGTVYRYERSG LHGL RVRGFTQDDAHIFCLP Q++EEIRGVLDL E IL+ FGF  YEV LST+PEKSVG  +IW  AT AL  ALE KGW Y +DEGGGAFYGPKID+KI DAIGR WQCST+Q DFNLP RF L YV  +  +K+PIM+HRAI GSIERFFGILVEN AGDFPLW++P+Q+RLLPVTD    + + V  +L     R E+  G ERL K IRNAE  +IPVM ++G KEVE G +T+RTR GG+LG   V+ +VA +  AVA
Sbjct:  102 EIPVSEEEIRPVVLPTNDSSQKLLQIRHTSAHVMAMAVQKLYPEAQVTIGPWIERGFYYDFDMKE-PLAEKDLKKIKKEMDKIVGRNLPLRREEVSREEAARRIKAINEPYKLEILDSIKTEPITIYHIGDEWWDLCAGPHLERTGQIPRRALELETVAGAYWRGDEKRAMLQRIYGTAWETEEQLKAYQVQKEEAKRRDHRRLGQDLGLFSIQEDAGGGLVFWHPKGAMVRHIIEEYWKKVHLQRGYELLYTPHVAKLDLWKTSGHYDFYRENMYDHMDVEDELYQLRPMNCPCHIQIYKDVLRSYRELPMRVAELGTVYRYERSGALHGLFRVRGFTQDDAHIFCLPDQIREEIRGVLDLTEEILTTFGFKNYEVNLSTRPEKSVGGDDIWEQATTALREALEDKGWNYSIDEGGGAFYGPKIDLKIEDAIGRKWQCSTVQVDFNLPHRFKLSYVDMNTQRKQPIMIHRAILGSIERFFGILVENYAGDFPLWLAPMQVRLLPVTDTQVPYCKDVVAKLKALDIRAEIAYG-ERLAKLIRNAETQKIPVMAVVGPKEVEDGTLTVRTRHGGELGSISVDHIVAKIQAAVA 691          
The following BLAST results are available for this feature:
BLAST of NO14G02350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_002186178.14.700e-25766.77predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX22709.18.300e-25467.72threonyl-tRNA synthetase [Fistulifera solaris][more]
GAX19238.11.200e-25265.91threonyl-tRNA synthetase [Fistulifera solaris][more]
OEU10603.11.500e-24766.24threonyl-tRNA synthetase [Fragilariopsis cylindrus... [more]
OSX76429.18.300e-24667.63hypothetical protein BU14_0191s0009 [Porphyra umbi... [more]
EJK61406.13.200e-24567.34hypothetical protein THAOC_18112, partial [Thalass... [more]
XP_005719141.12.300e-24367.63threonine--tRNA ligase, chloroplast or mitochondri... [more]
EWM24579.12.300e-24388.91threonyl-trna synthetase [Nannochloropsis gaditana... [more]
XP_024368229.12.100e-24168.06threonine--tRNA ligase, chloroplastic/mitochondria... [more]
PTQ32685.11.700e-23867.91hypothetical protein MARPO_0096s0034 [Marchantia p... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK002451NSK002451Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02350.1NO14G02350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|542243gene_5814Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100062g34gene5907Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02350.1NO14G02350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02350 ID=NO14G02350|Name=NO14G02350|organism=Nannochloropsis oceanica|type=gene|length=3873bp
AAATACAACAAATAGGGGCGTTTCAACCAGCACGCACAGCAGCTGCAGGT
GTCTGTGGTTGTCTCGAAAGGCAGGAGGGCGGTCTTGATCAATGGAGCGC
GAGTGCCGAGgtaaggcagagaggcaaaaccgagtatctgaacagcgtac
gtgggagagggggtgaacataacctggtctagtacacgacacaatcagac
cttttcctcctattttcgcgcacacacgcagGCGCTGCCTTTCAAAAGCG
TCAGCTCCCTGCGTTGTCCTTCCTGTCTCCGCCTGCCGGCTTGACCATGC
TCCTGCTCCTCCTCGCCTCCTCCTCCACGGCCAGCACGGCCAGCACGGCC
GCCCGTCGCACCCTCAGCAGCAGTAGCAGCGGCAGTCGACGCGGCCTTGT
CAGTGCTTTTGTACGATCAACATTTTCATCCTCTTCCACCACCAGCAGCA
GCCGTGCCCTGAGCTACAGCCCCTCCTCCCCCCGCACCTCACAACGGTTC
CACGGCCCTACCCCGTTCTTCGAACCTCGTCGTTTCACCCCCTCCCATCT
TAACGCCGCCAGTGGCACCGCTATCGCCGATGCACCCGTGAAGGAGACGA
TCAAACTTCCCACCAACGACAAAAGTCCCAATTTGTTAAGGATCCGTCAT
ACTTCCGCCCACGTCATGGCCATGGCAGTCCAGCGCCTCTTTCCTTCCGT
CCAAGTCACAATTGGCCCTTGGATTGAGAATGGTTTCTACTACGATTTCG
ACACTGGCGACACGAAGTTTACGGAAGAGGACTTGAGTAAGATCAAGAAG
GAAATGGAGAGGATCATCAAGAAGAGGATGCCGCTGAGGAGGGAGGAAGT
GTCGAGGGAGGAGGCCAGGAAACGCATCGTCGCGAACGGGGAGAAGTACA
AGCTGGAGATTTTGGACGGGATTAAGgtgaggaaagaagaaaggagagag
ggagggagggaggaagaaaaggaagacatgatctatctggtgcgcatgaa
tggaaagctagatggtgtgcaatgacttccttcctcccttctctcaccct
ccctccctcgcagACTGAACCCATCACCATCTACCACATCGGAGAGGAAT
GGTGGGATCTCTGCGCGGGCCCCCACGTCGAGTCCACGGGCGACCTGCCC
GCTAATGCCATTAAGCTCGAGTCGCTGGCGGGTGCGTACTGGCGAGGGGA
CGAGAAGAACGCCATGCTGACGAGGATTTACGGCACCGCTTGGGAGAGCA
AGGATCAACTTCGGGAGTACCAGCGTGTGATGGAAGAGGCGAAAAAAAGG
GACCACCGAGTGTTGGGGAAGAAGTTGGATTTGTTTTCGATCCAAGAGGA
CGCGGGGGGAGGGTTGGTGTTTTGGCACCCCAAGGGGGCGACGATCCGGA
AGATCATCGAAGATTTCTGGAAGGACGAGCACGAACGACGGGGGTACGCC
CTCCTCTACACGCCGCACATGGCGAACCTGAACCTGTGGAAGACGAGCGG
ACATTTCGATTTTTACAAGGAGGGCATGTTCGACCAGATGGAGGTGGAGA
CCGAGGCGTTTCAGATTCGGCCCATGAATTGTCCGTTTCATTGCTTGATT
TACAAGGACACGCTGCGGAGCTACCGAGAACTGCCGATCCGTTGGGCGGA
GCTTGGAACAGTGTACCGgtagggagggagggaggaaggggaggggtagt
gagaagggagggagggggagagggagggggggttcaaccagcttcagtcc
gtgcgactcacctccctccctccctccctccctccctccctccctccctc
cctccctccctcccccccccttccctccctcacttccttcgttttctagG
TATGAACGCTCAGGCACCCTGCACGGCTTAATGCGTGTGCGCGGTTTTAC
GCAAGACGACGCCCACATCTTCTGCTTGCCTTCTCAGCTCCAAGAAGAGA
TCCGCGGAGTCCTAGATTTGGTCGAATCGATTCTATCCAAATTCGGGTTC
AGTGAATACGAGGTGATGCTTTCAACGCAGCCAGAGAAGAGTGTCGGGAG
CCCTGAGATATGGACGGCGGCCACGGCGGCCTTGGTCGGCGCATTGGAGA
GGAAAGGGTGGGGGTATGAGGTGGATGAGGGGGGAGGCGCGTTTTACGGT
CCGAAGATCGATATTAAGATCCGGGATGCCATTGgtgggttgggggatgg
gagggtggaatggagggagggaggatgggaggaagggaatttgagaacct
cgaggtgatgaatgaatgctgttgatacacgggtcaatcgtacctccgcc
tctccgtccctcctttccttccagtagaataggaaggtgcagatacattc
acgtatatacccccctttctccatccctccctccctccctccctaccacg
tagGCCGCCTCTGGCAATGCTCTACCATCCAGTGCGACTTCAACCTCCCC
GAGCGTTTCGGCTTGGAGTACGTGGCCGACGATGGGGCCAAGgtacgaac
gagtgtctacccctccttccctccctccctccctatctacctatctacct
tctgtgtgtatccttgaaggaaggtacgacacatcctccttccctccttc
cctccttccctccttccctggttttttttcgtaagaaacggccctcatgg
tgcacgtggctcatgtccacgccctcctcccctcttccctcactcccttc
ctcctttccctccctcccccagAAACGCCCCATCATGGTCCACCGTGCTA
TCTTCGGCTCCATCGAACGTTTCTTCGGCATCTTGGTTGAGAATACTGCC
GGGGATTTCCCATTGTGGATGAGCCCTGTTCAAATGCGCTTGTTGCCAGT
GACGGACAAGgtaaggagaagagggaggggaagggaaggagggagggcga
agggaaaaggtgggggtcatcaccctatgaataatgccggtctgtcggcg
cctgttgccgacgacagacatggtaaggggacgaggccgcactaagcgag
aaacaccctgtctcgtttacctaccaaccacgcttttagtgctcccctca
ctttccaatcacccacgttacccccctctcccctcccccttccctcgctc
cctatctccaagGCGTTTGAGCATGCACAGGCCGTTAAGAAACGGCTCGC
CTTGGCGGGATATCGCGTTGAAGTCGATGCGGGGTCCGAACGATTGGGGA
AGCAAATCCGCAACGCCGAGCAAGCACGCATTCCGGTCATGGGAATCATC
GGGGCTAAGgtatggttataaagacggtggtaatatgctttatttttgtg
taatatgtgtacgtgatagcgaatgtttcatattttgggaccctcagggg
catcaggatgtcagagagagcataaccgggatgtgggcggacacaggctt
taattgtcaagagatatccaggaaatttacttcataaatgtttaaactga
aggttctcaatttttacattcttatatccgtcctttccttacctgcaaat
cggtttttcaaacataacagGAGGTAGAGAGTGGCGGTGTGACCATCCGC
ACCCGCCTGGGTGGCCAGCTGGGTCTGTACGAGGTGGAGGAATTGGTTGC
CGGCCTAGGACACGCGGTGGCAGAGACCAAGGAGCTGCACGAGGTCCTGG
AGGTGCGGGAGGAGGTGAAGGAGGAGAAGGAGAAAGAGAAGGAAGGGGTA
TGAGCGCACGGGGAGGGGAGAAGAAGGAGAATTAAGGGGCTGGAGTGTGT
GGTGTGGTGCGCGGTAGAATGCGGGGGATACTGACTAGCGGTGGAGAACA
TTTTGCTTTAAGAAGGCACCGAAACCAACCCGATGAAAGAATCAACAATT
CAGACGCGTTGACCACGGAAAGG
back to top

protein sequence of NO14G02350.1

>NO14G02350.1-protein ID=NO14G02350.1-protein|Name=NO14G02350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=737bp
MERECRGAAFQKRQLPALSFLSPPAGLTMLLLLLASSSTASTASTAARRT
LSSSSSGSRRGLVSAFVRSTFSSSSTTSSSRALSYSPSSPRTSQRFHGPT
PFFEPRRFTPSHLNAASGTAIADAPVKETIKLPTNDKSPNLLRIRHTSAH
VMAMAVQRLFPSVQVTIGPWIENGFYYDFDTGDTKFTEEDLSKIKKEMER
IIKKRMPLRREEVSREEARKRIVANGEKYKLEILDGIKTEPITIYHIGEE
WWDLCAGPHVESTGDLPANAIKLESLAGAYWRGDEKNAMLTRIYGTAWES
KDQLREYQRVMEEAKKRDHRVLGKKLDLFSIQEDAGGGLVFWHPKGATIR
KIIEDFWKDEHERRGYALLYTPHMANLNLWKTSGHFDFYKEGMFDQMEVE
TEAFQIRPMNCPFHCLIYKDTLRSYRELPIRWAELGTVYRYERSGTLHGL
MRVRGFTQDDAHIFCLPSQLQEEIRGVLDLVESILSKFGFSEYEVMLSTQ
PEKSVGSPEIWTAATAALVGALERKGWGYEVDEGGGAFYGPKIDIKIRDA
IGRLWQCSTIQCDFNLPERFGLEYVADDGAKKRPIMVHRAIFGSIERFFG
ILVENTAGDFPLWMSPVQMRLLPVTDKAFEHAQAVKKRLALAGYRVEVDA
GSERLGKQIRNAEQARIPVMGIIGAKEVESGGVTIRTRLGGQLGLYEVEE
LVAGLGHAVAETKELHEVLEVREEVKEEKEKEKEGV*
back to top
Synonyms
Publications