NO14G02220, NO14G02220 (gene) Nannochloropsis oceanica

Overview
NameNO14G02220
Unique NameNO14G02220
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1994
Alignment locationchr14:667670..669663 -

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Properties
Property NameValue
DescriptionTwo component sensor histidine kinase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr14genomechr14:667670..669663 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0016310phosphorylation
Vocabulary: Molecular Function
TermDefinition
GO:0016301kinase activity
Homology
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BLAST of NO14G02220 vs. NCBI_GenBank
Match: EWM24591.1 (two component sensor histidine kinase [Nannochloropsis gaditana])

HSP 1 Score: 294.3 bits (752), Expect = 7.300e-76
Identity = 217/488 (44.47%), Postives = 281/488 (57.58%), Query Frame = 0 
Query:   30 KSPSSVLLMLLAMPIVLPSVDAWIIPSLLRLPSASLPVALHSSTLTRCIPTSITSRRSVRGPTETE-TPSNVSAMTVFISAHTKLMQSICPRLLSCRMYSVAWESQMASLDDTALLLREEEFGALLARSKDPDDPSVGIATSCESIQN-DTSLSVLLLPLHSR-----EGTDWLVLSFNPSAQSRETQYTLLDNCITCLAAALNLTSHHHQDKKQNPAPLAQFLQAVRTPLGALRTFSKLLLRRMERDREGLSYELAKNVLIQSDQLVELLL-----DDTSERMESGXXXXXGWEMMNAQDG--SRSXXXXXXXXXXXARGGLMRREGLGRSRSSTLCELRGVLAPVVSAAQLVSSRDGISFFFFQEEDLPKHVPLLNETLLQETLGTLVESALGYALEGAVAGGQKPVVTLDVRRLGGGGAEEGPSTTLVFLVQDNGVAASTTHSSPEFGTIRKDVERMGARLEIRASKALGGTQASLYIDCSARKA 504
            K  +S   ML  + I+   VDAW     L  PS        ++ +      ++   +  R P ET+   +   A+   I A++ LM+S+ P L SCR+Y +   +   S     +L+ E EFGALL+R +  +D +V I  SCE ++  D   S LLLPL        EG  WLVL+F P ++    QY LLD CI CL A+L L S    DK    A L   L+AVRTPLGALRTFSKLL+RR+ERD EGLS ELAKNVLIQSD+LV++L+      +TSE M        G   + A++G     XXXXXX       GGL++R+G          ELR +LAP+VSAAQLVSSRDGI+F F  EE LP  VP+++   LQE +G LVESA+ +ALE      +KP VTL+VR L    A     +++VF+VQDNG  A        +G IRK+VER+GARLEIR S  LGG QA LYIDC + KA
Sbjct:    5 KRLASAGAMLGTIFIIRQGVDAWF---PLNTPSPYQARGAFTTVIQPPTRNAVFLSKDSRKPFETKLKAAKADAIPDLIRAYSSLMKSLFPELTSCRLY-IPEPNHSISSPGFEVLINEVEFGALLSRGRCREDFNVTITESCERVRTMDPIPSTLLLPLQEEEQLEAEGGAWLVLAFMPESKQPPAQYRLLDACIKCLIASLKLGSRPDPDKDPGNASLDWLLRAVRTPLGALRTFSKLLMRRLERDPEGLSLELAKNVLIQSDRLVDILMAYPEGHETSEAMM--CRHKGGLPPLMAEEGXXXXXXXXXXXNGGEGRGGGLVKRDGRMVDPEPRHFELREILAPIVSAAQLVSSRDGINFGFLMEETLPVRVPVVDMARLQEAVGGLVESAMAHALE-----NEKPTVTLEVRFL---EANPRSVSSVVFIVQDNGPRAPGAARPSAYGEIRKEVERIGARLEIRGSSDLGGCQACLYIDCKSDKA 478
The following BLAST results are available for this feature:
BLAST of NO14G02220 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM24591.17.300e-7644.47two component sensor histidine kinase [Nannochloro... [more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL138nonsL138Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR069ncniR069Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR023ngnoR023Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO14G02220.1NO14G02220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|566134gene_5800Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100062g21gene5897Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO14G02220.1NO14G02220.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO14G02220 ID=NO14G02220|Name=NO14G02220|organism=Nannochloropsis oceanica|type=gene|length=1994bp
CAAATCACCTGATTCCTTTCCGTGTATACTATCAACGCCACGTCTTGGGC
GGGAAATGAAAAGAGTTAAGACCCCCCTTCGAAGTATCAGACACCAACGG
CCTCCACCATCAAATGGGGTGGTAAGCGAATCGTTTTCAGAAATATTTAA
CCGTTTTTCTACCGCACATCCTCGAATGTTTTCCAGCCTTCTTGCCCAAG
GACAGGATAAAGACTCACTTGGGCATCCTATCACCCAACAAGAGCTGCAA
GGGAAGGCAAAAAATATAACCTCCCCGCAAGATCTCAAGCCAACCTCCAT
GCACGCTGTCACTCATCCGCTGCTCCAAAACACGCACAAATTCAGGCGAC
GGTATCAGCGCGAGGTCTGGAGGGAATGGCCCAGACAGGCAGCTCGCGCT
TCCCACGACACACCATGACGAACACAAGACCAAGACCAAGAGGGCAGCGC
TGCTCAAAACTAAAGTCGCCGTCGTCTGTGCTCCTCATGCTGCTGGCCAT
GCCCATCGTTCTTCCCTCTGTAGATGCGTGGATCATCCCCTCCTTACTAC
GCCTACCTTCTGCTTCTCTCCCCGTAGCCCTGCATTCCTCAACATTGACC
CGGTGCATCCCCACCTCCATCACCTCAAGGAGAAGCGTACGAGGACCAAC
CGAGACAGAGACACCATCAAACGTAAGCGCCATGACGGTTTTCATTAGTG
CCCACACAAAGCTAATGCAATCGATATGCCCAAGGCTTCTTAGCTGTCGC
ATGTATTCCGTCGCATGGGAAAGCCAAATGGCATCGCTCGATGACACGGC
GTTGCTGCTGCGGGAGGAAGAATTTGGTGCTCTCTTAGCCAGAAGTAAAG
ACCCGGACGATCCAAGTGTTGGCATCGCCACCTCTTGCGAATCAATACAA
AATGATACTTCGCTATCTGTCCTTCTCCTCCCCTTGCATTCTAGGGAAGG
GACGGATTGGTTAGTATTATCCTTCAACCCTTCTGCACAAAGCAGAGAAA
CCCAATACACTCTTCTCGACAACTGCATCACTTGTCTGGCTGCTGCCTTG
AACCTAACATCCCACCATCATCAAGACAAGAAGCAAAACCCTGCGCCCCT
CGCCCAATTTTTACAAGCAGTTCGGACGCCCTTGGGCGCTTTAAGGACGT
TCAGTAAATTACTGCTGCGTCGAATGGAGCGGGACCGGGAAGGACTCAGT
TACGAGCTGGCCAAAAATGTCTTGATTCAAAGTGACCAGCTTGTGGAGCT
GTTGCTGGATGATACATCGGAAAGGATGGAATCAGGAGGAGGAGGAGGAA
CAGGGTGGGAGATGATGAATGCCCAGGATGGGAGTAGAAGCGAGGAGGAG
ATGGAGGAGATGGAGGAGGCGGAGGCGCGGGGAGGGTTGATGAGGAGGGA
GGGCTTGGGCAGAAGCCGCTCGTCAACTTTGTGCGAATTGCGGGGTGTTT
TGGCCCCTGTTGTGAGTGCAGCACAATTAGTGAGCAGTCGGGATGGGATT
AGCTTTTTCTTTTTCCAGGAGGAGGATTTGCCAAAGCACGTGCCTTTGCT
GAACGAGACTCTGCTTCAAGAAACGCTGGGTACCCTGGTGGAGTCTGCCT
TGGGGTACGCTTTGGAGGGAGCTGTTGCAGGGGGTCAAAAGCCTGTGGTG
ACGCTGGATGTGCGGCGCTTAGGTGGTGGTGGTGCTGAAGAAGGGCCATC
AACGACTTTGGTGTTCCTTGTGCAAGACAACGGGGTGGCGGCGAGCACTA
CTCACAGCTCTCCCGAGTTCGGCACTATTCGAAAGGACGTGGAGCGGATG
GGCGCTCGCTTGGAAATTCGGGCTTCCAAGGCATTGGGAGGCACACAAGC
GAGCTTGTACATTGATTGTAGTGCGAGGAAAGCATATCAATAGAATGGAA
ACACATTGAAATGTGATGGAGGGCAATGCAAGGCATGTTGGCGTCTTTTT
CCTCCTTGCTTGTGTCACACACACACGATGTTCTCTGCTTTTCC
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protein sequence of NO14G02220.1

>NO14G02220.1-protein ID=NO14G02220.1-protein|Name=NO14G02220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=506bp
MAQTGSSRFPRHTMTNTRPRPRGQRCSKLKSPSSVLLMLLAMPIVLPSVD
AWIIPSLLRLPSASLPVALHSSTLTRCIPTSITSRRSVRGPTETETPSNV
SAMTVFISAHTKLMQSICPRLLSCRMYSVAWESQMASLDDTALLLREEEF
GALLARSKDPDDPSVGIATSCESIQNDTSLSVLLLPLHSREGTDWLVLSF
NPSAQSRETQYTLLDNCITCLAAALNLTSHHHQDKKQNPAPLAQFLQAVR
TPLGALRTFSKLLLRRMERDREGLSYELAKNVLIQSDQLVELLLDDTSER
MESGGGGGTGWEMMNAQDGSRSEEEMEEMEEAEARGGLMRREGLGRSRSS
TLCELRGVLAPVVSAAQLVSSRDGISFFFFQEEDLPKHVPLLNETLLQET
LGTLVESALGYALEGAVAGGQKPVVTLDVRRLGGGGAEEGPSTTLVFLVQ
DNGVAASTTHSSPEFGTIRKDVERMGARLEIRASKALGGTQASLYIDCSA
RKAYQ*
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Synonyms
Publications